LINC03071

Summary

LINC03071 (long intergenic non-protein coding RNA 3071, HGNC:56645) is a long non-coding RNA gene on chromosome 8q21.12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56645
Approved symbol	LINC03071
Name	long intergenic non-protein coding RNA 3071
Location	8q21.12
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC115837.2
Ensembl gene	ENSG00000254080
Ensembl biotype	lncRNA
Entrez	105375904
RNAcentral	URS00026A1F1A — lncRNA, 891 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000522127, ENST00000810368, ENST00000810369, ENST00000810370, ENST00000810371, ENST00000810372

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000522127 — 5 exons

Exon	Start	End
ENSE00002116679	74612454	74612566
ENSE00002134730	74632450	74632502
ENSE00002135357	74628801	74628882
ENSE00004207159	74633235	74633358
ENSE00004207161	74609698	74610040

Expression profiles

Bgee: expression breadth broad, 86 present calls, max score 91.02.

Top tissues by expression

86 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	91.02	gold quality
bone marrow cell	CL:0002092	66.75	silver quality
liver	UBERON:0002107	64.06	silver quality
hindlimb stylopod muscle	UBERON:0004252	62.55	gold quality
kidney	UBERON:0002113	61.48	silver quality
vagina	UBERON:0000996	60.74	gold quality
right testis	UBERON:0004534	59.61	gold quality
left testis	UBERON:0004533	59.27	gold quality
testis	UBERON:0000473	58.95	gold quality
blood	UBERON:0000178	58.13	gold quality
bone marrow	UBERON:0002371	57.04	silver quality
vermiform appendix	UBERON:0001154	56.90	gold quality
lymph node	UBERON:0000029	53.91	gold quality
calcaneal tendon	UBERON:0003701	53.90	gold quality
monocyte	CL:0000576	53.77	gold quality
prostate gland	UBERON:0002367	53.27	gold quality
endometrium	UBERON:0001295	53.15	gold quality
placenta	UBERON:0001987	52.65	gold quality
endocervix	UBERON:0000458	52.14	gold quality
thoracic mammary gland	UBERON:0005200	51.97	gold quality
ectocervix	UBERON:0012249	51.79	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	51.55	gold quality
saliva-secreting gland	UBERON:0001044	51.31	gold quality
multicellular organism	UBERON:0000468	50.69	gold quality
prefrontal cortex	UBERON:0000451	49.03	gold quality
smooth muscle tissue	UBERON:0001135	48.87	gold quality
adrenal gland	UBERON:0002369	48.14	gold quality
muscle of leg	UBERON:0001383	48.09	gold quality
corpus callosum	UBERON:0002336	47.65	silver quality
left adrenal gland cortex	UBERON:0035825	46.57	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.44

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.