LINC03076

Summary

LINC03076 (long intergenic non-protein coding RNA 3076, HGNC:56656) is a long non-coding RNA gene on chromosome 7q31.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56656
Approved symbol	LINC03076
Name	long intergenic non-protein coding RNA 3076
Location	7q31.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000223646
Ensembl biotype	lncRNA
Entrez	100996249
RNAcentral	URS000075BC92 — lncRNA, 682 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 51 — 51 lncRNA

ENST00000453459, ENST00000652784, ENST00000653349, ENST00000654684, ENST00000655918, ENST00000656697, ENST00000657014, ENST00000657067, ENST00000657316, ENST00000657817, ENST00000659268, ENST00000659368, ENST00000659758, ENST00000661554, ENST00000661587, ENST00000661783, ENST00000662309, ENST00000662625, ENST00000662984, ENST00000663080, ENST00000663814, ENST00000663988, ENST00000664010, ENST00000664143, ENST00000665310, ENST00000665657, ENST00000666635, ENST00000667178, ENST00000667242, ENST00000667580, ENST00000667747, ENST00000667945, ENST00000668050, ENST00000668809, ENST00000668947, ENST00000669892, ENST00000670213, ENST00000670420, ENST00000670567, ENST00000777762, ENST00000777763, ENST00000777764, ENST00000777765, ENST00000777766, ENST00000777767, ENST00000777768, ENST00000777769, ENST00000777770, ENST00000777771, ENST00000777772, ENST00000777773

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000453459 — 8 exons

Exon	Start	End
ENSE00001595427	112635838	112635922
ENSE00001600642	112635279	112635366
ENSE00001615758	112699330	112699522
ENSE00001644190	112701367	112701437
ENSE00001644669	112632558	112632665
ENSE00001741641	112622378	112622619
ENSE00001744660	112707737	112708080
ENSE00001753008	112640162	112640218

Expression profiles

Bgee: expression breadth ubiquitous, 148 present calls, max score 90.73.

Top tissues by expression

240 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	90.73	gold quality
right testis	UBERON:0004534	90.40	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.50	gold quality
testis	UBERON:0000473	86.50	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	74.47	gold quality
bone marrow cell	CL:0002092	67.93	silver quality
ventricular zone	UBERON:0003053	67.79	gold quality
calcaneal tendon	UBERON:0003701	67.28	gold quality
ganglionic eminence	UBERON:0004023	64.99	gold quality
cortical plate	UBERON:0005343	64.86	gold quality
hindlimb stylopod muscle	UBERON:0004252	62.54	gold quality
colonic epithelium	UBERON:0000397	62.53	silver quality
lower lobe of lung	UBERON:0008949	60.11	silver quality
sural nerve	UBERON:0015488	58.53	silver quality
leukocyte	CL:0000738	58.07	gold quality
monocyte	CL:0000576	58.01	gold quality
adrenal tissue	UBERON:0018303	57.89	gold quality
tendon	UBERON:0000043	57.05	gold quality
skin of abdomen	UBERON:0001416	55.53	gold quality
rectum	UBERON:0001052	55.35	gold quality
corpus callosum	UBERON:0002336	54.95	gold quality
skin of leg	UBERON:0001511	54.05	gold quality
body of pancreas	UBERON:0001150	53.71	gold quality
islet of Langerhans	UBERON:0000006	53.31	gold quality
pancreas	UBERON:0001264	53.24	gold quality
gall bladder	UBERON:0002110	53.10	gold quality
zone of skin	UBERON:0000014	52.98	gold quality
tonsil	UBERON:0002372	52.54	gold quality
lymph node	UBERON:0000029	51.97	gold quality
muscle of leg	UBERON:0001383	51.88	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.96

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.