LINC03079

Summary

LINC03079 (long intergenic non-protein coding RNA 3079, HGNC:56669) is a long non-coding RNA gene on chromosome 20q13.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56669
Approved symbol	LINC03079
Name	long intergenic non-protein coding RNA 3079
Location	20q13.13
Locus type	RNA, long non-coding
Status	Approved
Aliases	AL139351.1
Ensembl gene	ENSG00000276923
Ensembl biotype	lncRNA
Entrez	128193294
RNAcentral	URS000077BF40 — lncRNA, 320 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000622092

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000622092 — 1 exons

Exon	Start	End
ENSE00003745507	48073869	48074188

Expression profiles

Bgee: expression breadth ubiquitous, 102 present calls, max score 84.15.

Top tissues by expression

102 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
smooth muscle tissue	UBERON:0001135	84.15	gold quality
muscle tissue	UBERON:0002385	84.00	gold quality
myometrium	UBERON:0001296	81.18	gold quality
body of uterus	UBERON:0009853	80.64	gold quality
left ovary	UBERON:0002119	78.36	gold quality
ovary	UBERON:0000992	77.94	gold quality
right ovary	UBERON:0002118	77.35	gold quality
pituitary gland	UBERON:0000007	74.42	gold quality
adenohypophysis	UBERON:0002196	73.56	gold quality
monocyte	CL:0000576	70.48	gold quality
left uterine tube	UBERON:0001303	69.91	gold quality
uterine cervix	UBERON:0000002	69.04	gold quality
endocervix	UBERON:0000458	68.73	gold quality
endometrium	UBERON:0001295	68.47	gold quality
ectocervix	UBERON:0012249	68.15	gold quality
left adrenal gland cortex	UBERON:0035825	67.34	gold quality
left adrenal gland	UBERON:0001234	65.66	gold quality
right adrenal gland	UBERON:0001233	65.56	gold quality
adrenal gland	UBERON:0002369	65.44	gold quality
right adrenal gland cortex	UBERON:0035827	64.73	gold quality
placenta	UBERON:0001987	64.37	gold quality
prefrontal cortex	UBERON:0000451	64.01	gold quality
lower esophagus	UBERON:0013473	63.93	gold quality
lower esophagus muscularis layer	UBERON:0035833	63.86	gold quality
gall bladder	UBERON:0002110	63.73	gold quality
fallopian tube	UBERON:0003889	62.61	gold quality
substantia nigra	UBERON:0002038	62.37	gold quality
lymph node	UBERON:0000029	62.35	gold quality
vagina	UBERON:0000996	60.74	gold quality
esophagus	UBERON:0001043	60.20	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.49

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.