LINC03082

Summary

LINC03082 (long intergenic non-protein coding RNA 3082, HGNC:56676) is a long non-coding RNA gene on chromosome 13q34.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56676
Approved symbol	LINC03082
Name	long intergenic non-protein coding RNA 3082
Location	13q34
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000275830
Ensembl biotype	lncRNA
Entrez	101927646
RNAcentral	URS00026A2725 — lncRNA, 1903 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 44 — 44 lncRNA

ENST00000614099, ENST00000617298, ENST00000654209, ENST00000654849, ENST00000657447, ENST00000658519, ENST00000659060, ENST00000659867, ENST00000660081, ENST00000662389, ENST00000666014, ENST00000667832, ENST00000669022, ENST00000670698, ENST00000685028, ENST00000701064, ENST00000717707, ENST00000717708, ENST00000810078, ENST00000810079, ENST00000810080, ENST00000810081, ENST00000810082, ENST00000810083, ENST00000810084, ENST00000810085, ENST00000810086, ENST00000810087, ENST00000810088, ENST00000810089, ENST00000810090, ENST00000810091, ENST00000810092, ENST00000810093, ENST00000810094, ENST00000810095, ENST00000810096, ENST00000810097, ENST00000810098, ENST00000810099, ENST00000810100, ENST00000810101, ENST00000810102, ENST00000810103

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000614099 — 3 exons

Exon	Start	End
ENSE00003731010	110057126	110057331
ENSE00003739638	109988097	109988244
ENSE00003745604	110032608	110032809

Expression profiles

Bgee: expression breadth ubiquitous, 124 present calls, max score 92.78.

Top tissues by expression

124 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.78	gold quality
ascending aorta	UBERON:0001496	86.24	gold quality
thoracic aorta	UBERON:0001515	86.15	gold quality
descending thoracic aorta	UBERON:0002345	85.82	gold quality
right coronary artery	UBERON:0001625	83.02	gold quality
left coronary artery	UBERON:0001626	82.02	gold quality
right lung	UBERON:0002167	79.84	gold quality
substantia nigra	UBERON:0002038	76.61	gold quality
adenohypophysis	UBERON:0002196	72.99	gold quality
upper lobe of left lung	UBERON:0008952	72.77	gold quality
popliteal artery	UBERON:0002250	72.63	gold quality
tibial artery	UBERON:0007610	72.55	gold quality
Ammon’s horn	UBERON:0001954	71.77	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	71.18	gold quality
pituitary gland	UBERON:0000007	70.58	gold quality
hypothalamus	UBERON:0001898	70.08	gold quality
lung	UBERON:0002048	69.92	gold quality
prefrontal cortex	UBERON:0000451	69.32	gold quality
superior frontal gyrus	UBERON:0002661	68.86	gold quality
cerebral cortex	UBERON:0000956	68.83	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	68.75	gold quality
frontal cortex	UBERON:0001870	68.59	gold quality
amygdala	UBERON:0001876	68.59	gold quality
temporal lobe	UBERON:0001871	68.45	gold quality
liver	UBERON:0002107	68.45	gold quality
placenta	UBERON:0001987	67.92	gold quality
right frontal lobe	UBERON:0002810	67.45	gold quality
Brodmann (1909) area 9	UBERON:0013540	67.35	gold quality
anterior cingulate cortex	UBERON:0009835	67.33	gold quality
right lobe of liver	UBERON:0001114	66.82	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.10

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.