LINC03084

Summary

LINC03084 (long intergenic non-protein coding RNA 3084, HGNC:56686) is a long non-coding RNA gene on chromosome 8q23.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56686
Approved symbol	LINC03084
Name	long intergenic non-protein coding RNA 3084
Location	8q23.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000254041
Ensembl biotype	lncRNA
Entrez	101927392
RNAcentral	URS00026A2517 — lncRNA, 1220 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000518927

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000518927 — 3 exons

Exon	Start	End
ENSE00002090889	105142860	105143747
ENSE00002116826	105188536	105188606
ENSE00002132961	105167418	105167489

Expression profiles

Bgee: expression breadth broad, 93 present calls, max score 90.78.

Top tissues by expression

93 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	90.78	gold quality
omental fat pad	UBERON:0010414	57.07	gold quality
hindlimb stylopod muscle	UBERON:0004252	56.94	silver quality
gall bladder	UBERON:0002110	56.13	gold quality
lymph node	UBERON:0000029	54.14	gold quality
adipose tissue	UBERON:0001013	52.88	gold quality
prefrontal cortex	UBERON:0000451	52.12	gold quality
urinary bladder	UBERON:0001255	50.86	gold quality
ectocervix	UBERON:0012249	50.04	gold quality
thoracic mammary gland	UBERON:0005200	48.58	gold quality
muscle of leg	UBERON:0001383	48.20	gold quality
subcutaneous adipose tissue	UBERON:0002190	48.20	gold quality
right ovary	UBERON:0002118	47.98	gold quality
placenta	UBERON:0001987	47.33	gold quality
bone marrow	UBERON:0002371	47.08	silver quality
endometrium	UBERON:0001295	46.92	silver quality
cerebellar cortex	UBERON:0002129	46.70	silver quality
cerebellar hemisphere	UBERON:0002245	46.53	silver quality
myometrium	UBERON:0001296	46.45	gold quality
gastrocnemius	UBERON:0001388	46.33	gold quality
right hemisphere of cerebellum	UBERON:0014890	46.30	silver quality
vermiform appendix	UBERON:0001154	46.07	silver quality
popliteal artery	UBERON:0002250	45.99	gold quality
tibial artery	UBERON:0007610	45.96	gold quality
fallopian tube	UBERON:0003889	45.90	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	45.88	gold quality
multicellular organism	UBERON:0000468	45.82	gold quality
superior frontal gyrus	UBERON:0002661	45.74	silver quality
blood	UBERON:0000178	45.61	silver quality
lower esophagus muscularis layer	UBERON:0035833	45.20	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.12

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.