LINC03085

Summary

LINC03085 (long intergenic non-protein coding RNA 3085, HGNC:56691) is a long non-coding RNA gene on chromosome 19p12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56691
Approved symbol	LINC03085
Name	long intergenic non-protein coding RNA 3085
Location	19p12
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC073534.2
Ensembl gene	ENSG00000276030
Ensembl biotype	lncRNA
Entrez	128266841
RNAcentral	URS00026A1E1B — lncRNA, 607 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000620377

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000620377 — 1 exons

Exon	Start	End
ENSE00003714419	24146701	24147081

Expression profiles

Bgee: expression breadth ubiquitous, 128 present calls, max score 94.50.

Top tissues by expression

128 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	94.50	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	89.80	gold quality
bone marrow cell	CL:0002092	74.42	gold quality
skeletal muscle tissue	UBERON:0001134	71.13	gold quality
sural nerve	UBERON:0015488	70.97	gold quality
ganglionic eminence	UBERON:0004023	70.83	gold quality
cerebellar cortex	UBERON:0002129	70.09	gold quality
cerebellar hemisphere	UBERON:0002245	70.08	gold quality
ventricular zone	UBERON:0003053	70.00	gold quality
cerebellum	UBERON:0002037	69.84	gold quality
muscle tissue	UBERON:0002385	69.47	gold quality
endometrium	UBERON:0001295	68.64	gold quality
right hemisphere of cerebellum	UBERON:0014890	68.40	gold quality
calcaneal tendon	UBERON:0003701	68.22	gold quality
primary visual cortex	UBERON:0002436	67.42	gold quality
lower esophagus mucosa	UBERON:0035834	67.07	gold quality
cortical plate	UBERON:0005343	66.26	gold quality
Brodmann (1909) area 9	UBERON:0013540	65.13	gold quality
lymph node	UBERON:0000029	64.64	gold quality
right lung	UBERON:0002167	64.54	gold quality
bone marrow	UBERON:0002371	64.46	gold quality
cortex of kidney	UBERON:0001225	64.01	gold quality
kidney	UBERON:0002113	63.45	gold quality
gall bladder	UBERON:0002110	63.41	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	62.36	gold quality
blood	UBERON:0000178	62.23	gold quality
adrenal tissue	UBERON:0018303	62.22	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	62.21	gold quality
nucleus accumbens	UBERON:0001882	62.10	gold quality
brain	UBERON:0000955	62.03	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.