LINC03086

Summary

LINC03086 (long intergenic non-protein coding RNA 3086, HGNC:56701) is a long non-coding RNA gene on chromosome 20p13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56701
Approved symbol	LINC03086
Name	long intergenic non-protein coding RNA 3086
Location	20p13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000226644
Ensembl biotype	lncRNA
Entrez	388780
RNAcentral	URS0000E60B17 — lncRNA, 835 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000411839, ENST00000447956

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000411839 — 2 exons

Exon	Start	End
ENSE00001720881	2207227	2207519
ENSE00001774555	2212909	2213151

Expression profiles

Bgee: expression breadth ubiquitous, 156 present calls, max score 88.68.

Top tissues by expression

233 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bronchial epithelial cell	CL:0002328	88.68	gold quality
right uterine tube	UBERON:0001302	87.94	gold quality
bronchus	UBERON:0002185	87.82	gold quality
sural nerve	UBERON:0015488	87.51	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	85.17	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.31	gold quality
mucosa of paranasal sinus	UBERON:0005030	81.00	gold quality
upper arm skin	UBERON:0004263	78.99	gold quality
myocardium	UBERON:0002349	78.13	gold quality
nasal cavity mucosa	UBERON:0001826	77.48	gold quality
oviduct epithelium	UBERON:0004804	77.18	gold quality
sperm	CL:0000019	75.58	gold quality
epithelium of nasopharynx	UBERON:0001951	74.34	silver quality
vena cava	UBERON:0004087	74.17	gold quality
cardiac muscle of right atrium	UBERON:0003379	73.65	gold quality
left ventricle myocardium	UBERON:0006566	73.47	gold quality
gingival epithelium	UBERON:0001949	73.34	gold quality
lower esophagus mucosa	UBERON:0035834	72.81	gold quality
fallopian tube	UBERON:0003889	72.23	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	72.10	gold quality
bone marrow	UBERON:0002371	71.72	gold quality
cerebellar vermis	UBERON:0004720	71.43	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	70.10	gold quality
corpus callosum	UBERON:0002336	70.02	silver quality
buccal mucosa cell	CL:0002336	69.72	gold quality
nipple	UBERON:0002030	69.72	gold quality
kidney epithelium	UBERON:0004819	69.42	gold quality
mammary duct	UBERON:0001765	69.20	gold quality
tendon of biceps brachii	UBERON:0008188	69.18	gold quality
epithelium of mammary gland	UBERON:0003244	69.10	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	10.23

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.