LINC03098

Summary

LINC03098 (long intergenic non-protein coding RNA 3098, HGNC:56745) is a long non-coding RNA gene on chromosome Xq24.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56745
Approved symbol	LINC03098
Name	long intergenic non-protein coding RNA 3098
Location	Xq24
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000230392
Ensembl biotype	lncRNA
Entrez	101928336
RNAcentral	URS000075D423 — lncRNA, 2909 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000428222

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000428222 — 4 exons

Exon	Start	End
ENSE00001608304	119324907	119325023
ENSE00001764461	119333050	119335610
ENSE00001767827	119291529	119291621
ENSE00001786456	119326182	119326317

Expression profiles

Bgee: expression breadth broad, 42 present calls, max score 64.24.

Top tissues by expression

42 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
tonsil	UBERON:0002372	64.24	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	59.81	gold quality
cortical plate	UBERON:0005343	58.81	silver quality
ganglionic eminence	UBERON:0004023	58.37	gold quality
small intestine	UBERON:0002108	56.88	silver quality
urinary bladder	UBERON:0001255	52.29	silver quality
blood	UBERON:0000178	50.46	silver quality
thoracic mammary gland	UBERON:0005200	50.38	gold quality
stomach	UBERON:0000945	49.23	silver quality
endometrium	UBERON:0001295	46.71	silver quality
kidney	UBERON:0002113	46.10	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	45.94	silver quality
muscle of leg	UBERON:0001383	45.83	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	44.38	silver quality
primary visual cortex	UBERON:0002436	44.32	silver quality
gastrocnemius	UBERON:0001388	44.10	silver quality
gall bladder	UBERON:0002110	44.08	silver quality
tibial artery	UBERON:0007610	42.98	silver quality
left adrenal gland cortex	UBERON:0035825	41.87	silver quality
saliva-secreting gland	UBERON:0001044	41.66	silver quality
hypothalamus	UBERON:0001898	41.40	gold quality
heart	UBERON:0000948	40.33	silver quality
skin of leg	UBERON:0001511	40.12	silver quality
transverse colon	UBERON:0001157	39.24	silver quality
right adrenal gland cortex	UBERON:0035827	38.99	silver quality
esophagus mucosa	UBERON:0002469	38.98	silver quality
heart left ventricle	UBERON:0002084	38.89	silver quality
prostate gland	UBERON:0002367	38.81	silver quality
minor salivary gland	UBERON:0001830	38.57	silver quality
subcutaneous adipose tissue	UBERON:0002190	38.54	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.60

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.