LINC03100

Summary

LINC03100 (long intergenic non-protein coding RNA 3100, HGNC:56763) is a long non-coding RNA gene on chromosome 2q37.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56763
Approved symbol	LINC03100
Name	long intergenic non-protein coding RNA 3100
Location	2q37.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000261186
Ensembl biotype	lncRNA
Entrez	129810495
RNAcentral	URS00026A2075 — lncRNA, 1215 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000567549

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000567549 — 1 exons

Exon	Start	End
ENSE00002619533	242087351	242088457

Expression profiles

Bgee: expression breadth ubiquitous, 156 present calls, max score 83.85.

Top tissues by expression

244 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.85	gold quality
right hemisphere of cerebellum	UBERON:0014890	70.94	gold quality
cerebellar hemisphere	UBERON:0002245	70.91	gold quality
cortical plate	UBERON:0005343	70.74	gold quality
cerebellar cortex	UBERON:0002129	70.59	gold quality
anterior cingulate cortex	UBERON:0009835	70.52	gold quality
ventricular zone	UBERON:0003053	69.81	gold quality
cerebellum	UBERON:0002037	69.01	gold quality
nucleus accumbens	UBERON:0001882	68.85	gold quality
right frontal lobe	UBERON:0002810	68.51	gold quality
mucosa of stomach	UBERON:0001199	67.46	gold quality
Brodmann (1909) area 9	UBERON:0013540	66.58	gold quality
right uterine tube	UBERON:0001302	66.55	gold quality
hypothalamus	UBERON:0001898	66.00	gold quality
prefrontal cortex	UBERON:0000451	65.79	gold quality
amygdala	UBERON:0001876	65.79	gold quality
ileal mucosa	UBERON:0000331	65.67	gold quality
pituitary gland	UBERON:0000007	65.57	gold quality
putamen	UBERON:0001874	64.89	gold quality
caudate nucleus	UBERON:0001873	64.55	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	64.25	gold quality
adenohypophysis	UBERON:0002196	64.03	gold quality
neocortex	UBERON:0001950	63.84	gold quality
gastrocnemius	UBERON:0001388	63.80	gold quality
apex of heart	UBERON:0002098	63.68	gold quality
muscle of leg	UBERON:0001383	63.37	gold quality
metanephros cortex	UBERON:0010533	62.97	gold quality
left adrenal gland cortex	UBERON:0035825	62.58	gold quality
frontal cortex	UBERON:0001870	62.55	gold quality
ganglionic eminence	UBERON:0004023	62.40	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.25

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.