LINC03101

Summary

LINC03101 (long intergenic non-protein coding RNA 3101, HGNC:56823) is a long non-coding RNA gene on chromosome 18q23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56823
Approved symbol	LINC03101
Name	long intergenic non-protein coding RNA 3101
Location	18q23
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC018445.6
Ensembl gene	ENSG00000286296
Ensembl biotype	lncRNA
Entrez	129810497
RNAcentral	URS0000EEC27E — lncRNA, 1185 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000666976

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000666976 — 2 exons

Exon	Start	End
ENSE00003852494	79539574	79539829
ENSE00003855107	79539912	79540840

Expression profiles

Bgee: expression breadth broad, 93 present calls, max score 58.75.

Top tissues by expression

93 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
hindlimb stylopod muscle	UBERON:0004252	58.75	gold quality
skeletal muscle tissue	UBERON:0001134	57.12	gold quality
muscle of leg	UBERON:0001383	54.50	gold quality
gastrocnemius	UBERON:0001388	54.08	gold quality
lymph node	UBERON:0000029	53.10	gold quality
prefrontal cortex	UBERON:0000451	50.95	gold quality
monocyte	CL:0000576	50.32	silver quality
blood	UBERON:0000178	49.83	silver quality
spleen	UBERON:0002106	49.33	gold quality
tibial artery	UBERON:0007610	48.95	gold quality
popliteal artery	UBERON:0002250	48.87	gold quality
gall bladder	UBERON:0002110	48.44	gold quality
placenta	UBERON:0001987	48.25	gold quality
small intestine Peyer’s patch	UBERON:0003454	48.07	gold quality
small intestine	UBERON:0002108	48.04	gold quality
granulocyte	CL:0000094	48.00	silver quality
ascending aorta	UBERON:0001496	47.32	gold quality
muscle layer of sigmoid colon	UBERON:0035805	47.19	gold quality
lower esophagus muscularis layer	UBERON:0035833	47.02	gold quality
lower esophagus	UBERON:0013473	46.95	gold quality
thoracic aorta	UBERON:0001515	46.89	gold quality
right coronary artery	UBERON:0001625	46.66	gold quality
vermiform appendix	UBERON:0001154	46.58	silver quality
left coronary artery	UBERON:0001626	46.30	gold quality
esophagus	UBERON:0001043	45.94	gold quality
right lobe of liver	UBERON:0001114	45.93	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	45.82	silver quality
right frontal lobe	UBERON:0002810	45.79	gold quality
colon	UBERON:0001155	45.63	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	45.27	gold quality

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.