LINC03104

Summary

LINC03104 (long intergenic non-protein coding RNA 3104, HGNC:56834) is a long non-coding RNA gene on chromosome 21p12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56834
Approved symbol	LINC03104
Name	long intergenic non-protein coding RNA 3104
Location	21p12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000274333
Ensembl biotype	lncRNA
Entrez	102724219
RNAcentral	URS00021231C9 — lncRNA, 2353 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 52 — 52 lncRNA

ENST00000611026, ENST00000619252, ENST00000622939, ENST00000623050, ENST00000623436, ENST00000623449, ENST00000623887, ENST00000623914, ENST00000624368, ENST00000624412, ENST00000624444, ENST00000624516, ENST00000624627, ENST00000775081, ENST00000775082, ENST00000775083, ENST00000775084, ENST00000775085, ENST00000775086, ENST00000775087, ENST00000775088, ENST00000775089, ENST00000775090, ENST00000775091, ENST00000775092, ENST00000775093, ENST00000775094, ENST00000775095, ENST00000775096, ENST00000775097, ENST00000775098, ENST00000775099, ENST00000775100, ENST00000775101, ENST00000775102, ENST00000775103, ENST00000775104, ENST00000775105, ENST00000775106, ENST00000775107, ENST00000775108, ENST00000775109, ENST00000775110, ENST00000775111, ENST00000775112, ENST00000775113, ENST00000775114, ENST00000775115, ENST00000775116, ENST00000775117, ENST00000775118, ENST00000775119

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000611026 — 2 exons

Exon	Start	End
ENSE00003717842	5585778	5585987
ENSE00003740631	5590019	5592003

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 94.23.

Top tissues by expression

132 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ganglionic eminence	UBERON:0004023	94.23	gold quality
ventricular zone	UBERON:0003053	91.74	gold quality
cortical plate	UBERON:0005343	90.89	gold quality
mucosa of stomach	UBERON:0001199	89.52	gold quality
body of pancreas	UBERON:0001150	89.24	gold quality
metanephros cortex	UBERON:0010533	88.73	gold quality
cortex of kidney	UBERON:0001225	87.21	gold quality
right uterine tube	UBERON:0001302	87.14	gold quality
stromal cell of endometrium	CL:0002255	87.11	gold quality
pancreas	UBERON:0001264	86.21	gold quality
endometrium	UBERON:0001295	84.99	gold quality
right lobe of liver	UBERON:0001114	84.93	gold quality
liver	UBERON:0002107	84.61	gold quality
kidney	UBERON:0002113	84.06	gold quality
fundus of stomach	UBERON:0001160	84.04	gold quality
stomach	UBERON:0000945	83.88	gold quality
body of stomach	UBERON:0001161	83.04	gold quality
prostate gland	UBERON:0002367	83.03	gold quality
colonic epithelium	UBERON:0000397	83.00	gold quality
right ovary	UBERON:0002118	81.92	gold quality
left ovary	UBERON:0002119	81.83	gold quality
adult mammalian kidney	UBERON:0000082	81.65	gold quality
adrenal tissue	UBERON:0018303	81.64	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	81.24	gold quality
lower esophagus muscularis layer	UBERON:0035833	81.11	gold quality
lower esophagus	UBERON:0013473	81.09	gold quality
ovary	UBERON:0000992	81.02	gold quality
islet of Langerhans	UBERON:0000006	80.99	gold quality
transverse colon	UBERON:0001157	80.86	gold quality
rectum	UBERON:0001052	80.53	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.22

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.