LINC03107

Summary

LINC03107 (long intergenic non-protein coding RNA 3107, HGNC:56841) is a long non-coding RNA gene on chromosome 16p13.12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56841
Approved symbol	LINC03107
Name	long intergenic non-protein coding RNA 3107
Location	16p13.12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000263257
Ensembl biotype	lncRNA
Entrez	124903648
RNAcentral	URS0000DB7908 — lncRNA, 1265 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000572479, ENST00000647822, ENST00000656661

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000572479 — 3 exons

Exon	Start	End
ENSE00002658404	14418634	14418872
ENSE00002671710	14408039	14408219
ENSE00002672954	14410239	14410398

Expression profiles

Bgee: expression breadth ubiquitous, 107 present calls, max score 82.42.

Top tissues by expression

107 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.42	gold quality
descending thoracic aorta	UBERON:0002345	66.31	gold quality
left coronary artery	UBERON:0001626	65.12	gold quality
right coronary artery	UBERON:0001625	64.79	gold quality
apex of heart	UBERON:0002098	64.48	gold quality
right atrium auricular region	UBERON:0006631	63.38	gold quality
heart	UBERON:0000948	63.33	gold quality
heart left ventricle	UBERON:0002084	63.13	gold quality
thoracic aorta	UBERON:0001515	61.58	gold quality
popliteal artery	UBERON:0002250	61.07	gold quality
skeletal muscle tissue	UBERON:0001134	61.06	gold quality
ascending aorta	UBERON:0001496	61.03	gold quality
tibial artery	UBERON:0007610	60.95	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.75	gold quality
muscle of leg	UBERON:0001383	59.69	gold quality
gastrocnemius	UBERON:0001388	59.36	gold quality
tonsil	UBERON:0002372	59.30	silver quality
placenta	UBERON:0001987	58.21	gold quality
prostate gland	UBERON:0002367	58.04	gold quality
stromal cell of endometrium	CL:0002255	55.36	gold quality
subcutaneous adipose tissue	UBERON:0002190	53.87	gold quality
body of pancreas	UBERON:0001150	53.35	gold quality
pancreas	UBERON:0001264	52.96	gold quality
lymph node	UBERON:0000029	52.56	gold quality
adipose tissue	UBERON:0001013	51.60	gold quality
superior frontal gyrus	UBERON:0002661	51.47	gold quality
liver	UBERON:0002107	51.31	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	50.95	silver quality
multicellular organism	UBERON:0000468	50.84	gold quality
monocyte	CL:0000576	50.47	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.06

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.