LINC03108

Summary

LINC03108 (long intergenic non-protein coding RNA 3108, HGNC:56844) is a long non-coding RNA gene on chromosome 1q42.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56844
Approved symbol	LINC03108
Name	long intergenic non-protein coding RNA 3108
Location	1q42.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	AL391832.3
Ensembl gene	ENSG00000258082
Ensembl biotype	lncRNA
Entrez	130512932
RNAcentral	URS00026A273B — lncRNA, 5724 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000549744

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000549744 — 2 exons

Exon	Start	End
ENSE00002403971	234978814	234980343
ENSE00002409941	234980656	234980804

Expression profiles

Bgee: expression breadth ubiquitous, 106 present calls, max score 79.50.

Top tissues by expression

106 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	79.50	gold quality
bone marrow	UBERON:0002371	73.78	gold quality
blood	UBERON:0000178	69.67	gold quality
leukocyte	CL:0000738	68.99	gold quality
monocyte	CL:0000576	68.78	gold quality
granulocyte	CL:0000094	67.42	gold quality
vermiform appendix	UBERON:0001154	63.25	gold quality
placenta	UBERON:0001987	57.30	gold quality
skeletal muscle tissue	UBERON:0001134	55.83	gold quality
lymph node	UBERON:0000029	55.40	gold quality
tonsil	UBERON:0002372	55.37	gold quality
duodenum	UBERON:0002114	55.03	gold quality
descending thoracic aorta	UBERON:0002345	54.85	gold quality
gall bladder	UBERON:0002110	54.51	gold quality
right coronary artery	UBERON:0001625	52.81	gold quality
smooth muscle tissue	UBERON:0001135	52.35	gold quality
urinary bladder	UBERON:0001255	52.29	gold quality
spleen	UBERON:0002106	50.95	gold quality
multicellular organism	UBERON:0000468	50.79	gold quality
adrenal gland	UBERON:0002369	50.77	gold quality
left adrenal gland	UBERON:0001234	50.56	gold quality
right adrenal gland	UBERON:0001233	49.99	gold quality
right lung	UBERON:0002167	49.91	gold quality
myometrium	UBERON:0001296	49.83	gold quality
left adrenal gland cortex	UBERON:0035825	49.73	gold quality
prefrontal cortex	UBERON:0000451	49.70	gold quality
omental fat pad	UBERON:0010414	49.12	gold quality
thoracic aorta	UBERON:0001515	48.79	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	48.69	gold quality
liver	UBERON:0002107	48.65	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.75

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.