LINC03110

Summary

LINC03110 (long intergenic non-protein coding RNA 3110, HGNC:56846) is a long non-coding RNA gene on chromosome 18q21.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56846
Approved symbol	LINC03110
Name	long intergenic non-protein coding RNA 3110
Location	18q21.32
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000275418
Ensembl biotype	lncRNA
Entrez	102724745
RNAcentral	URS00026A2550 — lncRNA, 723 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000622763, ENST00000809521, ENST00000809522, ENST00000809523, ENST00000809524

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000622763 — 2 exons

Exon	Start	End
ENSE00003739596	58659858	58660013
ENSE00003747530	58660432	58660524

Expression profiles

Bgee: expression breadth broad, 95 present calls, max score 94.94.

Top tissues by expression

95 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	94.94	gold quality
lymph node	UBERON:0000029	83.10	gold quality
hindlimb stylopod muscle	UBERON:0004252	78.76	gold quality
bone marrow cell	CL:0002092	78.52	gold quality
granulocyte	CL:0000094	77.64	gold quality
skeletal muscle tissue	UBERON:0001134	77.38	gold quality
tonsil	UBERON:0002372	76.97	gold quality
spleen	UBERON:0002106	74.33	gold quality
bone marrow	UBERON:0002371	74.33	gold quality
vermiform appendix	UBERON:0001154	73.72	gold quality
muscle of leg	UBERON:0001383	69.74	gold quality
blood	UBERON:0000178	68.91	gold quality
leukocyte	CL:0000738	68.72	gold quality
gastrocnemius	UBERON:0001388	68.26	gold quality
prefrontal cortex	UBERON:0000451	66.69	gold quality
placenta	UBERON:0001987	65.93	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	65.65	gold quality
monocyte	CL:0000576	65.64	gold quality
urinary bladder	UBERON:0001255	65.21	gold quality
fundus of stomach	UBERON:0001160	63.55	gold quality
gall bladder	UBERON:0002110	62.74	gold quality
islet of Langerhans	UBERON:0000006	61.73	gold quality
anterior cingulate cortex	UBERON:0009835	61.27	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	60.96	gold quality
body of stomach	UBERON:0001161	59.59	gold quality
small intestine	UBERON:0002108	59.44	gold quality
mucosa of transverse colon	UBERON:0004991	59.42	gold quality
stomach	UBERON:0000945	59.40	gold quality
small intestine Peyer’s patch	UBERON:0003454	59.09	gold quality
multicellular organism	UBERON:0000468	58.88	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.29

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.