LINC03121

Summary

LINC03121 (long intergenic non-protein coding RNA 3121, HGNC:56937) is a long non-coding RNA gene on chromosome 1q31.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56937
Approved symbol	LINC03121
Name	long intergenic non-protein coding RNA 3121
Location	1q31.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	Lnc-PAL2G4A-4
Ensembl gene	ENSG00000261182
Ensembl biotype	lncRNA
Entrez	132565736
RNAcentral	URS0000429D60 — lncRNA, 2277 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000569873

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000569873 — 1 exons

Exon	Start	End
ENSE00002617400	188218400	188220676

Expression profiles

Bgee: expression breadth tissue_specific, 3 present calls, max score 84.32.

Top tissues by expression

165 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.32	gold quality
testis	UBERON:0000473	48.18	gold quality
gall bladder	UBERON:0002110	46.12	silver quality
buccal mucosa cell	CL:0002336	45.65	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
secondary oocyte	CL:0000655	42.57	gold quality
blood	UBERON:0000178	42.04	gold quality
heart left ventricle	UBERON:0002084	41.97	gold quality
vagina	UBERON:0000996	41.55	gold quality
vastus lateralis	UBERON:0001379	41.41	gold quality
oviduct epithelium	UBERON:0004804	41.40	gold quality
quadriceps femoris	UBERON:0001377	41.37	gold quality
prefrontal cortex	UBERON:0000451	41.35	gold quality
adult mammalian kidney	UBERON:0000082	41.34	gold quality
superficial temporal artery	UBERON:0001614	41.33	gold quality
cardiac ventricle	UBERON:0002082	41.15	gold quality
bone marrow	UBERON:0002371	41.14	gold quality
skeletal muscle tissue	UBERON:0001134	41.10	gold quality
palpebral conjunctiva	UBERON:0001812	41.10	gold quality
fallopian tube	UBERON:0003889	40.98	gold quality
mucosa of paranasal sinus	UBERON:0005030	40.98	gold quality
upper leg skin	UBERON:0004262	40.73	silver quality
amniotic fluid	UBERON:0000173	40.69	gold quality
nasal cavity mucosa	UBERON:0001826	40.63	gold quality
jejunal mucosa	UBERON:0000399	40.59	gold quality
endometrium	UBERON:0001295	40.57	gold quality
biceps brachii	UBERON:0001507	40.57	gold quality
adipose tissue	UBERON:0001013	40.50	gold quality
epithelium of nasopharynx	UBERON:0001951	40.45	gold quality
myocardium	UBERON:0002349	40.45	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.80

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.