LINC03136

Summary

LINC03136 (long intergenic non-protein coding RNA 3136, HGNC:58102) is a long non-coding RNA gene on chromosome 11q24.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58102
Approved symbol	LINC03136
Name	long intergenic non-protein coding RNA 3136
Location	11q24.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	AP000842.3
Ensembl gene	ENSG00000260209
Ensembl biotype	lncRNA
Entrez	124902781
RNAcentral	URS000014C965 — lncRNA, 1080 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000564354, ENST00000569238

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000564354 — 2 exons

Exon	Start	End
ENSE00002579459	125874246	125874398
ENSE00002607119	125873031	125873685

Expression profiles

Bgee: expression breadth ubiquitous, 122 present calls, max score 83.86.

Top tissues by expression

215 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.86	gold quality
colonic epithelium	UBERON:0000397	74.70	gold quality
tendon of biceps brachii	UBERON:0008188	64.43	gold quality
cortical plate	UBERON:0005343	62.44	gold quality
bone marrow cell	CL:0002092	61.92	silver quality
ganglionic eminence	UBERON:0004023	60.68	gold quality
buccal mucosa cell	CL:0002336	57.74	silver quality
hindlimb stylopod muscle	UBERON:0004252	54.92	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	53.62	silver quality
monocyte	CL:0000576	52.61	silver quality
adrenal tissue	UBERON:0018303	52.44	gold quality
islet of Langerhans	UBERON:0000006	50.58	gold quality
calcaneal tendon	UBERON:0003701	50.01	silver quality
right lobe of liver	UBERON:0001114	49.17	silver quality
upper leg skin	UBERON:0004262	48.71	gold quality
right hemisphere of cerebellum	UBERON:0014890	48.23	gold quality
cerebellar cortex	UBERON:0002129	47.76	silver quality
cerebellar hemisphere	UBERON:0002245	47.71	silver quality
skin of hip	UBERON:0001554	47.66	gold quality
lower esophagus mucosa	UBERON:0035834	47.65	gold quality
right testis	UBERON:0004534	47.26	gold quality
muscle of leg	UBERON:0001383	47.18	silver quality
pancreas	UBERON:0001264	47.11	gold quality
cerebellum	UBERON:0002037	47.09	silver quality
vermiform appendix	UBERON:0001154	46.91	gold quality
cortex of kidney	UBERON:0001225	46.72	silver quality
left testis	UBERON:0004533	46.65	gold quality
prefrontal cortex	UBERON:0000451	46.47	gold quality
testis	UBERON:0000473	46.45	gold quality
amniotic fluid	UBERON:0000173	46.38	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.81

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.