LINC03140

Summary

LINC03140 (long intergenic non-protein coding RNA 3140, HGNC:58127) is a long non-coding RNA gene on chromosome 4q28.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58127
Approved symbol	LINC03140
Name	long intergenic non-protein coding RNA 3140
Location	4q28.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	lincRNA-JADE1
Ensembl gene	ENSG00000248187
Ensembl biotype	lncRNA
Entrez	124900778
RNAcentral	URS0002A2FD6C — lncRNA, 1662 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000514265, ENST00000731507

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000514265 — 2 exons

Exon	Start	End
ENSE00004060990	128570225	128570531
ENSE00004060992	128567933	128569287

Expression profiles

Bgee: expression breadth broad, 100 present calls, max score 67.80.

Top tissues by expression

100 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
skeletal muscle tissue	UBERON:0001134	67.80	gold quality
left coronary artery	UBERON:0001626	66.83	gold quality
mucosa of stomach	UBERON:0001199	64.92	gold quality
putamen	UBERON:0001874	61.97	gold quality
vermiform appendix	UBERON:0001154	61.34	gold quality
subcutaneous adipose tissue	UBERON:0002190	61.27	gold quality
spleen	UBERON:0002106	61.15	gold quality
tibial artery	UBERON:0007610	61.04	gold quality
popliteal artery	UBERON:0002250	61.03	gold quality
adipose tissue	UBERON:0001013	60.77	gold quality
omental fat pad	UBERON:0010414	60.22	gold quality
myometrium	UBERON:0001296	59.62	gold quality
lower esophagus	UBERON:0013473	58.97	gold quality
descending thoracic aorta	UBERON:0002345	58.91	gold quality
lower esophagus muscularis layer	UBERON:0035833	58.83	gold quality
islet of Langerhans	UBERON:0000006	58.60	gold quality
blood	UBERON:0000178	58.23	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	57.98	gold quality
thoracic mammary gland	UBERON:0005200	57.76	gold quality
thoracic aorta	UBERON:0001515	57.70	gold quality
ascending aorta	UBERON:0001496	57.62	gold quality
left adrenal gland cortex	UBERON:0035825	57.08	gold quality
stromal cell of endometrium	CL:0002255	56.87	gold quality
esophagus	UBERON:0001043	56.73	gold quality
right adrenal gland	UBERON:0001233	56.61	gold quality
urinary bladder	UBERON:0001255	56.50	gold quality
left adrenal gland	UBERON:0001234	55.92	gold quality
gall bladder	UBERON:0002110	55.68	gold quality
right adrenal gland cortex	UBERON:0035827	55.66	gold quality
heart	UBERON:0000948	55.62	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.90

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.