LINC03141

Summary

LINC03141 (long intergenic non-protein coding RNA 3141, HGNC:58143) is a long non-coding RNA gene on chromosome 12p13.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58143
Approved symbol	LINC03141
Name	long intergenic non-protein coding RNA 3141
Location	12p13.32
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC007207.2
Ensembl gene	ENSG00000256969
Ensembl biotype	lncRNA
Entrez	105369611
RNAcentral	URS0000EEC39B — lncRNA, 1003 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000536141, ENST00000543206, ENST00000654858, ENST00000669712, ENST00000809032, ENST00000809033, ENST00000817244

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000536141 — 2 exons

Exon	Start	End
ENSE00004220824	4026222	4026654
ENSE00004220825	4025967	4026030

Expression profiles

Bgee: expression breadth ubiquitous, 133 present calls, max score 92.51.

Top tissues by expression

224 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
body of pancreas	UBERON:0001150	92.51	gold quality
pancreas	UBERON:0001264	83.70	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.15	gold quality
oocyte	CL:0000023	80.49	silver quality
right lobe of liver	UBERON:0001114	72.24	gold quality
islet of Langerhans	UBERON:0000006	68.47	gold quality
ganglionic eminence	UBERON:0004023	67.92	gold quality
secondary oocyte	CL:0000655	67.38	gold quality
liver	UBERON:0002107	67.11	gold quality
caput epididymis	UBERON:0004358	66.21	gold quality
stromal cell of endometrium	CL:0002255	61.63	gold quality
cauda epididymis	UBERON:0004360	61.43	silver quality
duodenum	UBERON:0002114	61.02	gold quality
tendon of biceps brachii	UBERON:0008188	59.73	gold quality
amygdala	UBERON:0001876	58.92	gold quality
oviduct epithelium	UBERON:0004804	58.32	silver quality
anterior cingulate cortex	UBERON:0009835	57.80	gold quality
tendon	UBERON:0000043	57.14	gold quality
cortex of kidney	UBERON:0001225	56.33	gold quality
right uterine tube	UBERON:0001302	56.11	gold quality
adult mammalian kidney	UBERON:0000082	55.88	gold quality
upper lobe of left lung	UBERON:0008952	55.79	gold quality
monocyte	CL:0000576	55.71	gold quality
fallopian tube	UBERON:0003889	55.50	gold quality
right adrenal gland cortex	UBERON:0035827	55.46	gold quality
upper lobe of lung	UBERON:0008948	54.71	gold quality
kidney	UBERON:0002113	54.67	gold quality
right adrenal gland	UBERON:0001233	54.47	gold quality
metanephros cortex	UBERON:0010533	53.55	gold quality
cerebellar vermis	UBERON:0004720	53.27	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	17.56

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.