LINC03145

Summary

LINC03145 (long intergenic non-protein coding RNA 3145, HGNC:56020) is a long non-coding RNA gene on chromosome 16q12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56020
Approved symbol	LINC03145
Name	long intergenic non-protein coding RNA 3145
Location	16q12.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	CRART16
Ensembl gene	ENSG00000259821
Ensembl biotype	lncRNA
Entrez	141445969

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000564193, ENST00000732744, ENST00000732745, ENST00000732746, ENST00000732747

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000564193 — 3 exons

Exon	Start	End
ENSE00002584420	47034994	47035385
ENSE00002589976	47029231	47029326
ENSE00002592628	47004513	47004768

Expression profiles

Bgee: expression breadth broad, 97 present calls, max score 78.13.

Top tissues by expression

97 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.13	silver quality
cortical plate	UBERON:0005343	66.63	gold quality
ventricular zone	UBERON:0003053	60.59	gold quality
liver	UBERON:0002107	58.89	gold quality
stromal cell of endometrium	CL:0002255	55.49	gold quality
gall bladder	UBERON:0002110	54.91	gold quality
lymph node	UBERON:0000029	53.02	gold quality
duodenum	UBERON:0002114	51.82	gold quality
islet of Langerhans	UBERON:0000006	51.69	gold quality
placenta	UBERON:0001987	51.42	gold quality
prefrontal cortex	UBERON:0000451	51.12	gold quality
blood	UBERON:0000178	50.63	silver quality
bone marrow	UBERON:0002371	49.70	silver quality
monocyte	CL:0000576	48.32	silver quality
endometrium	UBERON:0001295	48.29	gold quality
cortex of kidney	UBERON:0001225	48.20	silver quality
muscle of leg	UBERON:0001383	47.75	gold quality
right atrium auricular region	UBERON:0006631	47.19	gold quality
gastrocnemius	UBERON:0001388	46.97	gold quality
urinary bladder	UBERON:0001255	46.84	gold quality
smooth muscle tissue	UBERON:0001135	46.76	gold quality
superior frontal gyrus	UBERON:0002661	46.59	silver quality
heart	UBERON:0000948	46.34	gold quality
ectocervix	UBERON:0012249	46.16	gold quality
heart left ventricle	UBERON:0002084	46.09	gold quality
fallopian tube	UBERON:0003889	45.85	gold quality
cerebellar cortex	UBERON:0002129	45.82	silver quality
cerebellar hemisphere	UBERON:0002245	45.60	silver quality
frontal cortex	UBERON:0001870	45.52	gold quality
adult mammalian kidney	UBERON:0000082	45.42	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.63

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.