LINC03147

Summary

LINC03147 (long intergenic non-protein coding RNA 3147, HGNC:1279) is a long non-coding RNA gene on chromosome 21q21.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:1279
Approved symbol	LINC03147
Name	long intergenic non-protein coding RNA 3147
Location	21q21.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231755
Ensembl biotype	lncRNA
Entrez	54075
RNAcentral	URS000075AD2B — lncRNA, 461 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000447175

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000447175 — 3 exons

Exon	Start	End
ENSE00001614466	17885462	17885608
ENSE00001646083	17835016	17835826
ENSE00001760043	17840495	17840653

Expression profiles

Bgee: expression breadth broad, 42 present calls, max score 84.32.

Top tissues by expression

51 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
caudate nucleus	UBERON:0001873	84.32	gold quality
cerebellar vermis	UBERON:0004720	83.86	gold quality
anterior cingulate cortex	UBERON:0009835	83.57	gold quality
quadriceps femoris	UBERON:0001377	77.69	gold quality
bone marrow cell	CL:0002092	70.61	silver quality
skeletal muscle tissue	UBERON:0001134	63.24	silver quality
pancreas	UBERON:0001264	62.80	silver quality
lung	UBERON:0002048	61.99	silver quality
kidney	UBERON:0002113	61.59	silver quality
adrenal gland	UBERON:0002369	60.69	silver quality
thymus	UBERON:0002370	59.96	silver quality
monocyte	CL:0000576	52.59	silver quality
prefrontal cortex	UBERON:0000451	52.56	gold quality
blood	UBERON:0000178	52.07	silver quality
urinary bladder	UBERON:0001255	51.08	gold quality
frontal cortex	UBERON:0001870	50.78	gold quality
stomach	UBERON:0000945	50.73	gold quality
muscle of leg	UBERON:0001383	48.95	silver quality
gastrocnemius	UBERON:0001388	47.99	silver quality
calcaneal tendon	UBERON:0003701	47.36	silver quality
placenta	UBERON:0001987	46.97	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	46.72	gold quality
vermiform appendix	UBERON:0001154	46.37	silver quality
fallopian tube	UBERON:0003889	44.90	gold quality
Brodmann (1909) area 9	UBERON:0013540	44.43	silver quality
heart left ventricle	UBERON:0002084	44.36	silver quality
brain	UBERON:0000955	44.05	silver quality
skin of leg	UBERON:0001511	43.79	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	43.68	silver quality
intestine	UBERON:0000160	43.53	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.