LINC03152

Summary

LINC03152 (long intergenic non-protein coding RNA 3152, HGNC:58412) is a long non-coding RNA gene on chromosome 5q12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58412
Approved symbol	LINC03152
Name	long intergenic non-protein coding RNA 3152
Location	5q12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248529
Ensembl biotype	lncRNA
Entrez	101928651

Gene structure

Transcript identifiers

Ensembl transcripts: 22 — 22 lncRNA

ENST00000505623, ENST00000507264, ENST00000513386, ENST00000797315, ENST00000797316, ENST00000797317, ENST00000797318, ENST00000797319, ENST00000797320, ENST00000797321, ENST00000797322, ENST00000797323, ENST00000797324, ENST00000797325, ENST00000797326, ENST00000797327, ENST00000797328, ENST00000797329, ENST00000797330, ENST00000797331, ENST00000797332, ENST00000797333

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000505623 — 5 exons

Exon	Start	End
ENSE00002021166	61658474	61660179
ENSE00002028914	61667757	61667877
ENSE00002050024	61663390	61663543
ENSE00002067028	61687845	61687899
ENSE00002070823	61677623	61677691

Expression profiles

Bgee: expression breadth broad, 57 present calls, max score 88.02.

Top tissues by expression

173 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.02	gold quality
left testis	UBERON:0004533	73.55	gold quality
sperm	CL:0000019	73.34	gold quality
right testis	UBERON:0004534	71.50	gold quality
testis	UBERON:0000473	71.05	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	68.96	gold quality
vena cava	UBERON:0004087	63.69	gold quality
sural nerve	UBERON:0015488	63.54	silver quality
corpus callosum	UBERON:0002336	62.63	gold quality
gastrocnemius	UBERON:0001388	55.50	gold quality
monocyte	CL:0000576	53.74	gold quality
cortical plate	UBERON:0005343	53.61	silver quality
parotid gland	UBERON:0001831	52.42	gold quality
adrenal tissue	UBERON:0018303	50.50	silver quality
saliva-secreting gland	UBERON:0001044	50.11	gold quality
prefrontal cortex	UBERON:0000451	49.62	gold quality
buccal mucosa cell	CL:0002336	49.21	gold quality
upper leg skin	UBERON:0004262	49.11	silver quality
medial globus pallidus	UBERON:0002477	47.38	gold quality
upper lobe of lung	UBERON:0008948	46.00	silver quality
lower lobe of lung	UBERON:0008949	45.92	silver quality
globus pallidus	UBERON:0001875	45.70	gold quality
anatomical system	UBERON:0000467	44.55	gold quality
material anatomical entity	UBERON:0000465	44.37	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	44.32	gold quality
multicellular organism	UBERON:0000468	44.31	gold quality
cortex of kidney	UBERON:0001225	44.10	silver quality
gingiva	UBERON:0001828	44.08	gold quality
substantia nigra	UBERON:0002038	43.90	gold quality
spinal cord	UBERON:0002240	43.83	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.25

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.