LINC03163

Summary

LINC03163 (long intergenic non-protein coding RNA 3163, HGNC:27927) is a long non-coding RNA gene on chromosome 20p12.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27927
Approved symbol	LINC03163
Name	long intergenic non-protein coding RNA 3163
Location	20p12.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000230990
Ensembl biotype	lncRNA
Entrez	339593

Gene structure

Transcript identifiers

Ensembl transcripts: 9 — 9 lncRNA

ENST00000412405, ENST00000444792, ENST00000666460, ENST00000667330, ENST00000749127, ENST00000749128, ENST00000749129, ENST00000749130, ENST00000793620

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000412405 — 3 exons

Exon	Start	End
ENSE00001663715	11264950	11266443
ENSE00001766527	11268750	11268882
ENSE00003857464	11273334	11273404

Expression profiles

Bgee: expression breadth broad, 62 present calls, max score 84.16.

Top tissues by expression

176 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.16	gold quality
sural nerve	UBERON:0015488	71.20	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	59.25	gold quality
left testis	UBERON:0004533	58.12	gold quality
testis	UBERON:0000473	55.88	gold quality
hindlimb stylopod muscle	UBERON:0004252	55.72	gold quality
monocyte	CL:0000576	54.53	gold quality
tibial nerve	UBERON:0001323	53.14	gold quality
right testis	UBERON:0004534	52.56	gold quality
skin of abdomen	UBERON:0001416	50.53	gold quality
islet of Langerhans	UBERON:0000006	50.47	gold quality
vermiform appendix	UBERON:0001154	48.95	gold quality
muscle of leg	UBERON:0001383	48.42	gold quality
skin of leg	UBERON:0001511	48.04	gold quality
zone of skin	UBERON:0000014	47.92	gold quality
buccal mucosa cell	CL:0002336	47.30	gold quality
gastrocnemius	UBERON:0001388	46.67	gold quality
sperm	CL:0000019	46.34	gold quality
prefrontal cortex	UBERON:0000451	45.92	silver quality
anterior cingulate cortex	UBERON:0009835	45.83	gold quality
upper lobe of lung	UBERON:0008948	45.72	silver quality
lower lobe of lung	UBERON:0008949	45.50	silver quality
left uterine tube	UBERON:0001303	44.70	gold quality
heart left ventricle	UBERON:0002084	44.23	silver quality
cardiac ventricle	UBERON:0002082	43.64	silver quality
anatomical system	UBERON:0000467	43.54	gold quality
material anatomical entity	UBERON:0000465	43.37	gold quality
multicellular organism	UBERON:0000468	43.37	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
tibial artery	UBERON:0007610	43.13	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.40

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.