LINC03165

Summary

LINC03165 (long intergenic non-protein coding RNA 3165, HGNC:58928) is a long non-coding RNA gene on chromosome 1p34.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58928
Approved symbol	LINC03165
Name	long intergenic non-protein coding RNA 3165
Location	1p34.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	uc.16
Ensembl gene	ENSG00000286552
Ensembl biotype	lncRNA
Entrez	105378654

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000655033, ENST00000810720, ENST00000810721

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000655033 — 3 exons

Exon	Start	End
ENSE00003851875	38161693	38161823
ENSE00003861630	38149544	38150178
ENSE00003873737	38162279	38162545

Expression profiles

Bgee: expression breadth broad, 73 present calls, max score 88.87.

Top tissues by expression

73 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.87	gold quality
sural nerve	UBERON:0015488	64.82	silver quality
bone marrow cell	CL:0002092	64.51	silver quality
cortical plate	UBERON:0005343	60.59	gold quality
right testis	UBERON:0004534	60.55	gold quality
bone marrow	UBERON:0002371	58.77	silver quality
left testis	UBERON:0004533	57.69	gold quality
testis	UBERON:0000473	57.45	gold quality
blood	UBERON:0000178	51.05	silver quality
monocyte	CL:0000576	49.78	silver quality
thoracic aorta	UBERON:0001515	49.57	gold quality
ascending aorta	UBERON:0001496	49.48	gold quality
liver	UBERON:0002107	48.72	silver quality
adrenal gland	UBERON:0002369	48.67	gold quality
prefrontal cortex	UBERON:0000451	48.64	gold quality
muscle of leg	UBERON:0001383	48.50	gold quality
lymph node	UBERON:0000029	48.36	gold quality
right lobe of liver	UBERON:0001114	48.29	silver quality
gastrocnemius	UBERON:0001388	47.52	gold quality
myometrium	UBERON:0001296	47.42	gold quality
islet of Langerhans	UBERON:0000006	47.15	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	46.60	silver quality
thoracic mammary gland	UBERON:0005200	45.95	silver quality
frontal cortex	UBERON:0001870	45.74	gold quality
hindlimb stylopod muscle	UBERON:0004252	44.82	silver quality
body of stomach	UBERON:0001161	44.70	gold quality
tibial artery	UBERON:0007610	44.39	gold quality
kidney	UBERON:0002113	44.20	silver quality
body of pancreas	UBERON:0001150	43.81	silver quality
tonsil	UBERON:0002372	43.56	gold quality

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.