LINC03188

Summary

LINC03188 (long intergenic non-protein coding RNA 3188, HGNC:58953) is a long non-coding RNA gene on chromosome 7p15.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58953
Approved symbol	LINC03188
Name	long intergenic non-protein coding RNA 3188
Location	7p15.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	uc.206
Ensembl gene	ENSG00000285592
Ensembl biotype	lncRNA
Entrez	144467521

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000649509, ENST00000743052, ENST00000743053, ENST00000743054, ENST00000743055

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000649509 — 6 exons

Exon	Start	End
ENSE00003835889	20959391	20959632
ENSE00003836847	21028751	21028813
ENSE00003838489	20968056	20968123
ENSE00003839150	20975104	20975168
ENSE00003839646	20964034	20964342
ENSE00003840323	20986694	20986869

Expression profiles

Bgee: expression breadth broad, 16 present calls, max score 87.63.

Top tissues by expression

16 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.63	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	84.92	gold quality
monocyte	CL:0000576	56.03	gold quality
blood	UBERON:0000178	53.47	silver quality
prefrontal cortex	UBERON:0000451	50.90	gold quality
islet of Langerhans	UBERON:0000006	49.24	gold quality
small intestine	UBERON:0002108	48.18	gold quality
heart left ventricle	UBERON:0002084	43.99	silver quality
Ammon’s horn	UBERON:0001954	42.23	gold quality
stomach	UBERON:0000945	40.71	silver quality
amygdala	UBERON:0001876	36.65	silver quality
lower esophagus muscularis layer	UBERON:0035833	36.15	silver quality
testis	UBERON:0000473	33.51	gold quality
right testis	UBERON:0004534	33.40	silver quality
left testis	UBERON:0004533	31.87	silver quality
right frontal lobe	UBERON:0002810	28.78	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.11

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.