LINC03215

Summary

LINC03215 (long intergenic non-protein coding RNA 3215, HGNC:59078) is a long non-coding RNA gene on chromosome 4p15.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:59078
Approved symbol	LINC03215
Name	long intergenic non-protein coding RNA 3215
Location	4p15.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000286046
Ensembl biotype	lncRNA
Entrez	105374510

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000652661, ENST00000767385

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000652661 — 9 exons

Exon	Start	End
ENSE00003841409	18418662	18418962
ENSE00003842778	18629100	18629295
ENSE00003843503	18738230	18738314
ENSE00003845384	18888378	18888662
ENSE00003845682	18832865	18832932
ENSE00003845919	18488857	18488973
ENSE00003848036	18802313	18802432
ENSE00003850058	18832041	18832140
ENSE00003850456	18877617	18877666

Expression profiles

Bgee: expression breadth broad, 73 present calls, max score 76.56.

Top tissues by expression

73 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.56	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	70.07	silver quality
gall bladder	UBERON:0002110	63.66	gold quality
duodenum	UBERON:0002114	61.44	gold quality
ventricular zone	UBERON:0003053	60.80	gold quality
ganglionic eminence	UBERON:0004023	60.70	gold quality
cortical plate	UBERON:0005343	60.42	silver quality
islet of Langerhans	UBERON:0000006	54.74	gold quality
placenta	UBERON:0001987	53.82	gold quality
pancreas	UBERON:0001264	52.59	gold quality
skeletal muscle tissue	UBERON:0001134	52.23	silver quality
endometrium	UBERON:0001295	51.46	silver quality
monocyte	CL:0000576	51.19	silver quality
right adrenal gland cortex	UBERON:0035827	50.64	gold quality
fundus of stomach	UBERON:0001160	49.56	gold quality
intestine	UBERON:0000160	48.95	gold quality
small intestine	UBERON:0002108	48.80	gold quality
prefrontal cortex	UBERON:0000451	48.65	silver quality
lymph node	UBERON:0000029	48.62	silver quality
metanephros cortex	UBERON:0010533	48.30	gold quality
cortex of kidney	UBERON:0001225	48.27	gold quality
body of pancreas	UBERON:0001150	48.15	gold quality
right adrenal gland	UBERON:0001233	47.22	gold quality
saliva-secreting gland	UBERON:0001044	47.09	silver quality
blood	UBERON:0000178	46.89	silver quality
left adrenal gland cortex	UBERON:0035825	46.44	gold quality
Ammon’s horn	UBERON:0001954	46.36	silver quality
kidney	UBERON:0002113	46.12	gold quality
small intestine Peyer’s patch	UBERON:0003454	45.87	gold quality
skin of leg	UBERON:0001511	45.86	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.77

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.