LINC03216

Summary

LINC03216 (long intergenic non-protein coding RNA 3216, HGNC:59079) is a long non-coding RNA gene on chromosome 4p15.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:59079
Approved symbol	LINC03216
Name	long intergenic non-protein coding RNA 3216
Location	4p15.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248515
Ensembl biotype	lncRNA
Entrez	105374511

Gene structure

Transcript identifiers

Ensembl transcripts: 14 — 14 lncRNA

ENST00000511431, ENST00000655810, ENST00000661892, ENST00000669511, ENST00000796527, ENST00000819372, ENST00000819373, ENST00000819374, ENST00000819375, ENST00000819376, ENST00000819377, ENST00000819378, ENST00000819379, ENST00000819380

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000511431 — 4 exons

Exon	Start	End
ENSE00002055305	19909212	19909692
ENSE00002067461	19455436	19455652
ENSE00002068178	19533548	19533618
ENSE00002081039	19856276	19856395

Expression profiles

Bgee: expression breadth broad, 80 present calls, max score 79.18.

Top tissues by expression

80 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
endometrium	UBERON:0001295	79.18	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.03	silver quality
right uterine tube	UBERON:0001302	75.43	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	71.42	gold quality
uterine cervix	UBERON:0000002	66.37	gold quality
endocervix	UBERON:0000458	65.34	gold quality
skeletal muscle tissue	UBERON:0001134	64.48	silver quality
liver	UBERON:0002107	63.76	silver quality
ventricular zone	UBERON:0003053	63.57	gold quality
fallopian tube	UBERON:0003889	62.12	gold quality
calcaneal tendon	UBERON:0003701	58.62	gold quality
hindlimb stylopod muscle	UBERON:0004252	57.07	gold quality
body of uterus	UBERON:0009853	57.05	gold quality
monocyte	CL:0000576	55.95	gold quality
tonsil	UBERON:0002372	55.67	gold quality
myometrium	UBERON:0001296	55.40	gold quality
placenta	UBERON:0001987	55.08	gold quality
blood	UBERON:0000178	54.32	gold quality
islet of Langerhans	UBERON:0000006	52.62	gold quality
cortex of kidney	UBERON:0001225	51.71	gold quality
pancreas	UBERON:0001264	51.30	gold quality
prefrontal cortex	UBERON:0000451	49.86	gold quality
smooth muscle tissue	UBERON:0001135	49.67	gold quality
muscle of leg	UBERON:0001383	48.76	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	48.67	gold quality
kidney	UBERON:0002113	47.95	gold quality
left lobe of thyroid gland	UBERON:0001120	47.85	gold quality
left uterine tube	UBERON:0001303	47.35	gold quality
gastrocnemius	UBERON:0001388	47.32	silver quality
thyroid gland	UBERON:0002046	46.87	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.82

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.