LINC03224

Summary

LINC03224 (long intergenic non-protein coding RNA 3224, HGNC:59167) is a long non-coding RNA gene on chromosome 5q35.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:59167
Approved symbol	LINC03224
Name	long intergenic non-protein coding RNA 3224
Location	5q35.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249186
Ensembl biotype	lncRNA
Entrez	105377753

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000504214, ENST00000504362, ENST00000505248, ENST00000667415, ENST00000839274, ENST00000839275, ENST00000839276

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000504214 — 2 exons

Exon	Start	End
ENSE00004261331	177870853	177871228
ENSE00004261337	177864393	177864634

Expression profiles

Bgee: expression breadth broad, 80 present calls, max score 83.60.

Top tissues by expression

80 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.60	gold quality
sural nerve	UBERON:0015488	74.04	gold quality
right testis	UBERON:0004534	72.13	gold quality
left testis	UBERON:0004533	71.65	gold quality
testis	UBERON:0000473	71.48	gold quality
bone marrow cell	CL:0002092	65.60	silver quality
blood	UBERON:0000178	60.88	gold quality
primary visual cortex	UBERON:0002436	58.29	gold quality
lymph node	UBERON:0000029	57.82	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	57.31	gold quality
monocyte	CL:0000576	57.12	gold quality
granulocyte	CL:0000094	56.60	gold quality
superior frontal gyrus	UBERON:0002661	56.36	gold quality
bone marrow	UBERON:0002371	55.85	gold quality
tonsil	UBERON:0002372	55.10	gold quality
multicellular organism	UBERON:0000468	53.94	gold quality
right lobe of liver	UBERON:0001114	52.87	gold quality
prefrontal cortex	UBERON:0000451	51.81	gold quality
kidney	UBERON:0002113	51.72	gold quality
adrenal tissue	UBERON:0018303	51.11	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	50.50	gold quality
gastrocnemius	UBERON:0001388	50.27	gold quality
cortex of kidney	UBERON:0001225	49.61	silver quality
Ammon’s horn	UBERON:0001954	48.79	gold quality
spleen	UBERON:0002106	48.01	gold quality
right atrium auricular region	UBERON:0006631	47.57	gold quality
esophagus mucosa	UBERON:0002469	47.49	gold quality
cerebellar cortex	UBERON:0002129	47.46	silver quality
cerebellar hemisphere	UBERON:0002245	47.39	silver quality
Brodmann (1909) area 9	UBERON:0013540	47.22	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.31

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.