LINC03227

Summary

LINC03227 (long intergenic non-protein coding RNA 3227, HGNC:27583) is a long non-coding RNA gene on chromosome 17p11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27583
Approved symbol	LINC03227
Name	long intergenic non-protein coding RNA 3227
Location	17p11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000230709
Ensembl biotype	lncRNA
Entrez	284191

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000428142

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000428142 — 3 exons

Exon	Start	End
ENSE00001595923	16980201	16980716
ENSE00001683127	16975999	16977630
ENSE00001723158	16981301	16981353

Expression profiles

Bgee: expression breadth broad, 57 present calls, max score 75.71.

Top tissues by expression

57 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	75.71	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	73.73	gold quality
bone marrow	UBERON:0002371	71.65	gold quality
ventricular zone	UBERON:0003053	58.77	silver quality
adrenal gland	UBERON:0002369	58.23	gold quality
spleen	UBERON:0002106	57.47	gold quality
tonsil	UBERON:0002372	57.18	gold quality
urinary bladder	UBERON:0001255	54.56	gold quality
blood	UBERON:0000178	53.80	gold quality
rectum	UBERON:0001052	51.83	gold quality
lymph node	UBERON:0000029	51.18	gold quality
prefrontal cortex	UBERON:0000451	50.77	silver quality
monocyte	CL:0000576	50.44	silver quality
duodenum	UBERON:0002114	49.28	gold quality
multicellular organism	UBERON:0000468	48.99	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	48.66	gold quality
small intestine	UBERON:0002108	47.04	gold quality
vermiform appendix	UBERON:0001154	46.96	silver quality
small intestine Peyer’s patch	UBERON:0003454	46.78	gold quality
intestine	UBERON:0000160	46.47	gold quality
gastrocnemius	UBERON:0001388	46.24	silver quality
colon	UBERON:0001155	45.79	gold quality
placenta	UBERON:0001987	45.69	silver quality
transverse colon	UBERON:0001157	45.61	gold quality
fundus of stomach	UBERON:0001160	45.61	gold quality
saliva-secreting gland	UBERON:0001044	45.53	gold quality
islet of Langerhans	UBERON:0000006	45.26	gold quality
lower esophagus muscularis layer	UBERON:0035833	45.17	silver quality
minor salivary gland	UBERON:0001830	44.85	gold quality
esophagus	UBERON:0001043	44.82	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.65

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.