LIPE
gene geneOn this page
Also known as HSL
Summary
LIPE (lipase E, hormone sensitive type, HGNC:6621) is a protein-coding gene on chromosome 19q13.2, encoding Hormone-sensitive lipase (Q05469). Lipase with broad substrate specificity, catalyzing the hydrolysis of triacylglycerols (TAGs), diacylglycerols (DAGs), monoacylglycerols (MAGs), cholesteryl esters and retinyl esters.
The protein encoded by this gene has a long and a short form, generated by use of alternative translational start codons. The long form is expressed in steroidogenic tissues such as testis, where it converts cholesteryl esters to free cholesterol for steroid hormone production. The short form is expressed in adipose tissue, among others, where it hydrolyzes stored triglycerides to free fatty acids.
Source: NCBI Gene 3991 — RefSeq curated summary.
At a glance
- Gene–disease (curated): LIPE-related familial partial lipodystrophy (Definitive, ClinGen)
- Clinical variants (ClinVar): 300 total — 3 pathogenic, 5 likely-pathogenic
- Expression (HPA): Group enriched — highest in adipose tissue, parieto-temporal junction (white matter), cerebellar white matter
- GTEx eGene: eQTL in 9 tissues, sQTL in 2 (q < 0.05)
- Phenotypes (HPO): 37
- Constraint (gnomAD): pLI 0.00 (LoF-tolerant), LOEUF 0.93 (unconstrained)
- MANE Select transcript:
NM_005357 - Interaction hub: 2,022 STRING partners (top 7% of genes corpus-wide)
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:6621 |
| Approved symbol | LIPE |
| Name | lipase E, hormone sensitive type |
| Location | 19q13.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | HSL |
| Ensembl gene | ENSG00000079435 |
| Ensembl biotype | protein_coding |
| OMIM | 151750 |
| Entrez | 3991 |
Gene structure
Transcript identifiers
Ensembl transcripts: 9 — 7 protein_coding, 1 retained_intron, 1 protein_coding_CDS_not_defined
MANE Select: ENST00000244289
Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 2, TSL 3: 4, TSL 5: 3
ENST00000244289, ENST00000597001, ENST00000597620, ENST00000599211, ENST00000599783, ENST00000599918, ENST00000600224, ENST00000601189, ENST00000602000
RefSeq mRNA: 10 — MANE Select: NM_005357
NM_001416100, NM_001416101, NM_001416102, NM_001416103, NM_001416104, NM_001416105, NM_001416106, NM_001416107, NM_001416108, NM_005357
CCDS: CCDS12607
Canonical transcript exons
ENST00000244289 — 10 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000709257 | 42406161 | 42406388 |
| ENSE00000709260 | 42405385 | 42405561 |
| ENSE00000709262 | 42402607 | 42403031 |
| ENSE00001162583 | 42426267 | 42427388 |
| ENSE00001194800 | 42401514 | 42402075 |
| ENSE00003076590 | 42407174 | 42407468 |
| ENSE00004034694 | 42407976 | 42408121 |
| ENSE00004034696 | 42407606 | 42407791 |
| ENSE00004034697 | 42408232 | 42408322 |
| ENSE00004034698 | 42410307 | 42410842 |
Expression profiles
Bgee: expression breadth ubiquitous, 207 present calls, max score 98.67.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 14.1310 / max 2297.0978, expressed in 923 samples.
Highest expression (Bgee): omental fat pad, peritoneum, C1 segment of cervical spinal cord, adipose tissue of abdominal region, subcutaneous adipose tissue.
Genetic regulation across tissues (GTEx eQTL / sQTL)
LIPE is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 9 tissues and its splicing (sQTL) in 2 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.
11 significant tissue × QTL associations:
| Tissue | QTL | q-value | Slope | Lead variant |
|---|---|---|---|---|
| Lung | eqtl | 4.4e-08 | +0.46 | 19:42423369:T:C |
| Spleen | eqtl | 1.8e-04 | +0.49 | 19:42412478:G:C |
| Whole Blood | eqtl | 2.7e-04 | +0.25 | 19:42412478:G:C |
| Brain Anterior cingulate cortex BA24 | eqtl | 5.6e-03 | +0.47 | 19:42394998:T:G |
| Brain Caudate basal ganglia | sqtl | 7.7e-03 | -2.34 | 19:43261245:C:G |
| Adipose Subcutaneous | sqtl | 1.4e-02 | -0.44 | 19:41443569:G:T |
| Breast Mammary Tissue | eqtl | 1.9e-02 | -0.32 | 19:41480535:A:G |
| Cells Cultured fibroblasts | eqtl | 3.2e-02 | +0.24 | 19:42249131:G:A |
| Artery Tibial | eqtl | 3.8e-02 | -0.37 | 19:42442175:G:C |
| Skin Sun Exposed Lower leg | eqtl | 3.9e-02 | +0.41 | 19:42904634:T:A |
| Adipose Subcutaneous | eqtl | 4.5e-02 | -0.08 | 19:43391628:G:A |
FANTOM5 promoters
7 alternative TSS:
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 181186 | 11.8181 | 226 |
| 181190 | 1.4375 | 689 |
| 181189 | 0.6774 | 317 |
| 181187 | 0.0950 | 36 |
| 181191 | 0.0685 | 14 |
| 181192 | 0.0302 | 9 |
| 181188 | 0.0043 | 3 |
Top tissues by expression
showing 100 of 276 tissues by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| omental fat pad | UBERON:0010414 | 98.67 | gold quality |
| peritoneum | UBERON:0002358 | 98.63 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 97.87 | gold quality |
| adipose tissue of abdominal region | UBERON:0007808 | 97.79 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 97.63 | gold quality |
| adipose tissue | UBERON:0001013 | 97.34 | gold quality |
| spinal cord | UBERON:0002240 | 96.34 | gold quality |
| connective tissue | UBERON:0002384 | 95.56 | gold quality |
| pericardium | UBERON:0002407 | 94.94 | gold quality |
| right testis | UBERON:0004534 | 94.68 | gold quality |
| left testis | UBERON:0004533 | 94.59 | gold quality |
| inferior vagus X ganglion | UBERON:0005363 | 93.58 | silver quality |
| apex of heart | UBERON:0002098 | 93.09 | gold quality |
| middle frontal gyrus | UBERON:0002702 | 93.00 | gold quality |
| inferior olivary complex | UBERON:0002127 | 92.49 | silver quality |
| olfactory bulb | UBERON:0002264 | 92.04 | gold quality |
| subthalamic nucleus | UBERON:0001906 | 91.89 | silver quality |
| right adrenal gland cortex | UBERON:0035827 | 91.40 | gold quality |
| type B pancreatic cell | CL:0000169 | 91.05 | gold quality |
| right adrenal gland | UBERON:0001233 | 90.99 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 90.76 | gold quality |
| left adrenal gland | UBERON:0001234 | 90.57 | gold quality |
| adrenal cortex | UBERON:0001235 | 90.53 | gold quality |
| testis | UBERON:0000473 | 90.49 | gold quality |
| dorsal motor nucleus of vagus nerve | UBERON:0002870 | 90.36 | silver quality |
| substantia nigra | UBERON:0002038 | 90.33 | gold quality |
| midbrain | UBERON:0001891 | 90.28 | gold quality |
| corpus callosum | UBERON:0002336 | 89.79 | gold quality |
| heart left ventricle | UBERON:0002084 | 89.59 | gold quality |
| adrenal gland | UBERON:0002369 | 89.52 | gold quality |
| pons | UBERON:0000988 | 89.51 | silver quality |
| cardiac ventricle | UBERON:0002082 | 89.51 | gold quality |
| putamen | UBERON:0001874 | 89.42 | gold quality |
| ventral tegmental area | UBERON:0002691 | 89.30 | silver quality |
| substantia nigra pars reticulata | UBERON:0001966 | 89.19 | silver quality |
| hindlimb stylopod muscle | UBERON:0004252 | 89.16 | gold quality |
| vena cava | UBERON:0004087 | 88.99 | silver quality |
| medulla oblongata | UBERON:0001896 | 88.94 | gold quality |
| lateral globus pallidus | UBERON:0002476 | 88.70 | silver quality |
| diaphragm | UBERON:0001103 | 88.42 | gold quality |
| dorsal plus ventral thalamus | UBERON:0001897 | 88.36 | silver quality |
| Ammon’s horn | UBERON:0001954 | 88.32 | gold quality |
| skeletal muscle tissue of rectus abdominis | UBERON:0004511 | 87.88 | gold quality |
| lateral nuclear group of thalamus | UBERON:0002736 | 87.74 | silver quality |
| prefrontal cortex | UBERON:0000451 | 87.62 | gold quality |
| heart right ventricle | UBERON:0002080 | 87.61 | silver quality |
| superior vestibular nucleus | UBERON:0007227 | 87.19 | silver quality |
| hypothalamus | UBERON:0001898 | 87.09 | gold quality |
| mammary duct | UBERON:0001765 | 87.02 | silver quality |
| caudate nucleus | UBERON:0001873 | 86.89 | gold quality |
| substantia nigra pars compacta | UBERON:0001965 | 86.80 | silver quality |
| paraflocculus | UBERON:0005351 | 86.55 | silver quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 86.54 | gold quality |
| amygdala | UBERON:0001876 | 86.35 | gold quality |
| Brodmann (1909) area 10 | UBERON:0013541 | 86.23 | silver quality |
| ventricular zone | UBERON:0003053 | 86.15 | gold quality |
| adrenal tissue | UBERON:0018303 | 86.06 | gold quality |
| nucleus accumbens | UBERON:0001882 | 86.04 | gold quality |
| layer of synovial tissue | UBERON:0007616 | 86.00 | gold quality |
| Brodmann (1909) area 46 | UBERON:0006483 | 85.83 | silver quality |
| vastus lateralis | UBERON:0001379 | 85.76 | gold quality |
| heart | UBERON:0000948 | 85.70 | gold quality |
| frontal pole | UBERON:0002795 | 85.69 | gold quality |
| frontal cortex | UBERON:0001870 | 85.58 | gold quality |
| cardia of stomach | UBERON:0001162 | 85.45 | gold quality |
| telencephalon | UBERON:0001893 | 85.37 | gold quality |
| epithelium of mammary gland | UBERON:0003244 | 85.17 | silver quality |
| tibial nerve | UBERON:0001323 | 85.14 | gold quality |
| central nervous system | UBERON:0001017 | 85.01 | gold quality |
| forebrain | UBERON:0001890 | 84.84 | gold quality |
| temporal lobe | UBERON:0001871 | 84.83 | gold quality |
| gastrocnemius | UBERON:0001388 | 84.80 | gold quality |
| right frontal lobe | UBERON:0002810 | 84.78 | gold quality |
| left coronary artery | UBERON:0001626 | 84.76 | gold quality |
| parietal lobe | UBERON:0001872 | 84.74 | silver quality |
| neocortex | UBERON:0001950 | 84.68 | gold quality |
| brain | UBERON:0000955 | 84.65 | gold quality |
| cerebral cortex | UBERON:0000956 | 84.65 | gold quality |
| coronary artery | UBERON:0001621 | 84.56 | gold quality |
| postcentral gyrus | UBERON:0002581 | 84.54 | silver quality |
| synovial joint | UBERON:0002217 | 84.09 | silver quality |
| ganglionic eminence | UBERON:0004023 | 84.08 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 84.05 | gold quality |
| muscle of leg | UBERON:0001383 | 84.04 | gold quality |
| muscle organ | UBERON:0001630 | 83.81 | gold quality |
| occipital lobe | UBERON:0002021 | 83.70 | gold quality |
| thoracic mammary gland | UBERON:0005200 | 83.65 | gold quality |
| skin of leg | UBERON:0001511 | 83.64 | gold quality |
| mammary gland | UBERON:0001911 | 83.54 | gold quality |
| endothelial cell | CL:0000115 | 83.52 | silver quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 83.49 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 83.35 | gold quality |
| spleen | UBERON:0002106 | 83.32 | gold quality |
| cerebellar cortex | UBERON:0002129 | 83.26 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 83.22 | gold quality |
| cerebellum | UBERON:0002037 | 83.19 | gold quality |
| right atrium auricular region | UBERON:0006631 | 83.05 | gold quality |
| primary visual cortex | UBERON:0002436 | 82.92 | gold quality |
| cardiac atrium | UBERON:0002081 | 82.78 | gold quality |
| saliva-secreting gland | UBERON:0001044 | 82.76 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 0.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | no | 3.49 |
HPA expression
RNA tissue specificity: Group enriched
showing 60 of 76 HPA tissues / cells by nTPM:
| Tissue / cell | Axis | nTPM | Protein (IHC) |
|---|---|---|---|
| Adipose tissue | tissue | 783.5 | high |
| Locus coeruleus | tissue | 65.7 | |
| Nucleus accumbens | tissue | 59.1 | |
| Hippocampus | tissue | 41.9 | not detected |
| Postcentral gyrus | tissue | 31.5 | |
| Breast | tissue | 25.2 | high |
| Testis | tissue | 22.1 | high |
| Corpus callosum | tissue | 22.1 | |
| Tongue | tissue | 21.7 | |
| Adrenal gland | tissue | 16.4 | not detected |
| Salivary gland | tissue | 16.2 | not detected |
| Spinal cord | tissue | 15.8 | |
| Heart muscle | tissue | 13.4 | not detected |
| Medulla oblongata | tissue | 12.9 | |
| Choroid plexus | tissue | 11.8 | |
| Skeletal muscle | tissue | 10.6 | not detected |
| Midbrain | tissue | 10.5 | |
| Substantia nigra | tissue | 10.2 | |
| Superior colliculi | tissue | 8.6 | |
| Thalamus | tissue | 8.3 | |
| Spleen | tissue | 7.9 | not detected |
| Periaqueductal gray | tissue | 7.8 | |
| Pons | tissue | 7.7 | |
| Ventral forebrain | tissue | 7.5 | |
| Appendix | tissue | 7.4 | medium |
| Vagina | tissue | 7.2 | not detected |
| Putamen | tissue | 7.1 | |
| Small intestine | tissue | 7.1 | medium |
| Pituitary gland | tissue | 6.8 | |
| Lymph node | tissue | 6.8 | not detected |
| Cerebellum | tissue | 6.8 | not detected |
| Hypothalamus | tissue | 6.5 | |
| Thymus | tissue | 6.5 | |
| Colon | tissue | 5.8 | medium |
| Hippocampal formation | tissue | 5.8 | |
| Caudate putamen | tissue | 5.8 | |
| Olfactory bulb | tissue | 5.5 | |
| Septum | tissue | 5.4 | |
| Duodenum | tissue | 5.0 | medium |
| Bone marrow | tissue | 4.7 | not detected |
| Cerebral cortex | tissue | 4.6 | not detected |
| Somatosensory cortex | tissue | 4.6 | |
| Pancreas | tissue | 4.5 | not detected |
| Parathyroid gland | tissue | 4.4 | not detected |
| Retrosplenial cortex | tissue | 4.4 | |
| Occipital cortex | tissue | 4.4 | |
| Esophagus | tissue | 4.2 | not detected |
| Frontal cortex | tissue | 4.2 | |
| Amygdala | tissue | 4.2 | |
| Insular cortex | tissue | 4.2 | |
| Basal ganglia | tissue | 4.1 | not detected |
| Motor cortex | tissue | 4.0 | |
| Urinary bladder | tissue | 3.9 | not detected |
| Retrosplenial and cingulate cortex | tissue | 3.6 | |
| Gallbladder | tissue | 3.5 | not detected |
| Temporal cortex | tissue | 3.5 | |
| Prefrontal cortex | tissue | 3.4 | |
| Tonsil | tissue | 3.4 | not detected |
| Entorhinal cortex | tissue | 3.2 | |
| Placenta | tissue | 2.8 | not detected |
Brain sub-regions (HPA Brain Atlas): detected in 189; highest nTPM — Parieto-temporal junction (white matter) (248.3), Cerebellar white matter (241.7), Nucleus raphe obscurus (225.0), Nucleus raphe pallidus (212.9), Nucleus ambiguus (211.2).
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): CREM, DGKQ, ID2, NFKB1, NR1H3, NR5A1, PPARG, RELA, RXRA, SP1, SREBF1, TCF3, USF1
miRNA regulators (miRDB)
Targeting LIPE by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).
11 miRNAs:
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6867-5P | 100.00 | 82.21 | 3464 |
| HSA-MIR-497-5P | 99.92 | 71.83 | 2674 |
| HSA-MIR-15A-5P | 99.90 | 72.80 | 2787 |
| HSA-MIR-15B-5P | 99.90 | 72.78 | 2798 |
| HSA-MIR-16-5P | 99.90 | 72.80 | 2780 |
| HSA-MIR-195-5P | 99.90 | 72.81 | 2805 |
| HSA-MIR-124-3P | 99.89 | 73.74 | 3043 |
| HSA-MIR-506-3P | 99.89 | 73.55 | 3057 |
| HSA-MIR-6838-5P | 99.89 | 71.94 | 2690 |
| HSA-MIR-424-5P | 99.89 | 71.90 | 2641 |
| HSA-MIR-3714 | 99.71 | 70.74 | 2671 |
Functional genomics
gnomAD constraint: pLI 2.34e-17, LOEUF 0.932, missense Z 0.61 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD
Regional missense constraint (gnomAD RMC): no regional variation along ENST00000244289 — one region, missense o/e 0.94.
Literature-anchored findings (GeneRIF, showing 40)
- genes of C3, hormone-sensitive lipase, and PPARgamma may exert a modifying effect on lipid and glucose metabolism in familial combined hypersensitivity (PMID:11979403)
- overexpression of HSL, despite increased lipase activity, does not lead to enhanced lipolysis (PMID:12518034)
- HSL i6 A5 HOMOZYGOSITY IS A RISK FACTOR FOR BODY FAT ACCUMULATION (PMID:12534454)
- high concentrations of estradiol significantly increased both hormone-sensitive lipase expression and glycerol release relative to control (PMID:12701046)
- lipolytic catecholamine resistance of sc adipocytes in polycystic ovary syndrome is probably due to a combination of decreased amounts of beta(2)-adrenergic receptors, the regulatory II beta-component of protein kinase A, and hormone-sensitive lipase (PMID:12727985)
- High adrenaline levels can stimulate hormone-sensitive lipase(HSL) activity regardless of metabolic milieu. Large increases in adrenaline during exercise are able to further stimulate contraction-induced increase in HSL activity. (PMID:12730334)
- The presence of a catalytically inactive variant of this enzyme is associated with decreased lipolysis in abdominal subcutaneous adipose tissue of obese subjects (PMID:12765952)
- role of cyclic GMP in natriuretic peptide-mediated phosphorylation in adipocytes (PMID:12970365)
- AMPK is a major regulator of skeletal muscle HSL activity that can override beta-adrenergic stimulation (PMID:15231718)
- catalytic serine of hormone-sensitive lipase is highly reactive and similar behavior was also observed with lipases with no lid domain covering their active site, or with a deletion in the lid domain (PMID:15260473)
- 5’AMP-activated protein kinase phosphorylates hormone-sensitive lipase on Ser565 in human skeletal muscle during exercise with reduced muscle glycogen. Apparently, HSL Ser565 phosphorylation by AMPK during exercise (PMID:15308678)
- mechanism of infertility in HSL-deficient males is cell autonomous and resides in postmeiotic germ cells, because HSL expression in these cells is in itself sufficient to restore normal fertility (PMID:15345679)
- a pre-lipolysis complex containing at least AFABP and HSL exists (PMID:15456755)
- Basal HSL is decreased in patients with type 2 diabetes mellitus, and this may be a consequence of elevated plasma insulin levels. (PMID:15609025)
- Perilipin targets a novel pool of lipid droplets for lipolytic attack by hormone-sensitive lipase (PMID:16243839)
- the HSL C-60G polymorphism is associated with increased waist circumference in non-obese subjects (PMID:16534522)
- adrenergic stimulation contributes to the increase in HSL activity that occurs in human skeletal muscle in the first minute of exercise at 65% and 90% VO2 peak (PMID:16690773)
- HSL gene expression shows a regulation according to obesity status and is associated with increased adipose tissue lipase activity. (PMID:16752181)
- although HSL expression and Ser(659) phosphorylation in skeletal muscle during exercise is sex specific, total muscle HSL activity measured in vitro was similar between sexes (PMID:16822962)
- maternal type 1 diabetes is associated with TG accumulation and increased EL and HSL gene expression in placenta (PMID:16940551)
- hormone-sensitive lipase (PMID:17026959)
- Adipose triglyceride lipase and hormone sensitive lipase are responsible for more than 95% of the triacylglycerol hydrolase activity present in murine white adipose tissue. (PMID:17074755)
- The combined effect of LIPC, LIPE and ApoCIII gene polymorphisms may increase the likelihood of gestational hypertension, but seemingly not of preeclampsia. (PMID:17318300)
- Adipose triglyceride lipase (ATGL) is less important than hormone-sensitive lipase (HSL) in regulating catecholamine-induced lipolysis. Both lipases regulate basal lipolysis in human adipocytes. ATGL expression is not influenced by obesity or PCOS. (PMID:17327373)
- In obese subjects, insulin resistance and hyperinsulinemia are strongly associated with ATGL and HSL mRNA and protein expression, independent of fat mass (PMID:17356053)
- Dydrogesterone and norethisterone increase secretion of HSL from abdominaal adipocytes. (PMID:17587400)
- variation of the HSL gene might be associated with a physiological effect on in vivo beta-adrenoceptor-mediated fat oxidation (PMID:18249203)
- Real-time PCR revealed that large adipocytes expressed higher mRNA levels of hormone sensitive lipase. (PMID:18383440)
- Obesity is accompanied by impaired fasting glycerol release, lower HSL protein expression, and serine phosphorylation. (PMID:18398140)
- Mapping of the hormone-sensitive lipase binding site on the adipocyte fatty acid-binding protein (AFABP). Identification of the charge quartet on the AFABP/aP2 helix-turn-helix domain. (PMID:18820256)
- analysis of human, mouse and ovine Hormone Sensitive Lipase (PMID:18824087)
- PKA activates human HSL against lipid substrates in vitro primarily through phosphorylation of Ser649 and Ser650 (PMID:19018281)
- These results suggest that the associations between physical activity and body fat and plasma lipoprotein/lipid concentrations in men are dependent on the LIPE C-60G polymorphism,. (PMID:19164092)
- results suggest that ATGL/CGI-58 acts independently of HSL and precedes its action in the sequential hydrolysis of triglycerides in human hMADS adipocytes (PMID:19433586)
- TNFalpha decreased ATGL and HSL protein content and triglycerides (TG)-hydrolase activity but increased basal lipolysis due to a marked reduction in perilipin (PLIN) protein content (PMID:19695247)
- The present study aimed at comparing expression and subcellular distribution of perilipin and hormone-sensitive lipase in two abdominal adipose tissues of lean and obese women. (PMID:20017959)
- Those findings indicate improvement and conservation of lifestyle depending on genetic predisposition in ADIPOQ, PLIN and LIPE should be encouraged. (PMID:20495294)
- Data show that hormone-sensitive lipase activity is reduced in adipose tissue of patients with and without diabetes, while lipoprotein lipase activity is reduces only in patients with diabetes. (PMID:20926921)
- It is concluded that ACTH via the PKA pathway stimulates expression of SF-1, which activates transcription of LIPE presumably by interaction with putative binding sequences within promoter A (PMID:21081692)
- Studies indicate tha HSL is regulated by reversible phosphorylation on five critical residues. (PMID:21241784)
Cross-species orthologs
6 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | lipea | ENSDARG00000063037 |
| danio_rerio | lipeb | ENSDARG00000101145 |
| mus_musculus | Lipe | ENSMUSG00000003123 |
| rattus_norvegicus | Lipe | ENSRNOG00000020546 |
| drosophila_melanogaster | Hsl | FBGN0034491 |
| caenorhabditis_elegans | WBGENE00016704 |
Mouse-model phenotypes
Observed phenotypes of the mouse ortholog (MGI:96790) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 72 distinct phenotype terms.
| Mouse phenotype (MP) | Records |
|---|---|
| male infertility | 4 |
| increased circulating glucose level | 4 |
| decreased liver triglyceride level | 3 |
| increased circulating insulin level | 2 |
| oligozoospermia | 2 |
| decreased circulating free fatty acids level | 2 |
| increased triglyceride level | 2 |
| decreased circulating leptin level | 2 |
| abnormal white adipose tissue physiology | 2 |
| increased pancreatic beta cell mass | 2 |
| abnormal seminiferous tubule epithelium morphology | 2 |
| decreased circulating adiponectin level | 2 |
| increased brown adipose tissue amount | 1 |
| abnormal abdominal fat pad morphology | 1 |
| increased bone mineral density | 1 |
| abnormal circulating cholesterol level | 1 |
| abnormal triglyceride level | 1 |
| abnormal testis morphology | 1 |
| small testis | 1 |
| decreased body weight | 1 |
| hyperactivity | 1 |
| abnormal lipid level | 1 |
| increased circulating triglyceride level | 1 |
| abnormal circulating free fatty acids level | 1 |
| increased circulating free fatty acids level | 1 |
+47 more (showing top 25).
Additional cross-species homologs
Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.
| Organism | UniProt | Identity | Method |
|---|---|---|---|
| Escherichia coli APEC O1 | A1A8E2 | 100.0% | Diamond |
| Escherichia coli SMS-3-5 | B1LJN4 | 100.0% | Diamond |
| Escherichia coli str. K-12 substr. DH10B | B1XFR3 | 100.0% | Diamond |
| Salmonella enterica subsp. enterica serovar Newport str. SL254 | B4SWY4 | 100.0% | Diamond |
| Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 | B5FLK0 | 100.0% | Diamond |
| Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 | B5QU79 | 100.0% | Diamond |
| Escherichia coli O157:H7 str. EC4115 | B5Z3Y7 | 100.0% | Diamond |
| Escherichia coli SE11 | B6I0B9 | 100.0% | Diamond |
| Escherichia coli 55989 | B7L7A1 | 100.0% | Diamond |
| Escherichia coli IAI1 | B7M3W8 | 100.0% | Diamond |
| Escherichia coli S88 | B7MDZ8 | 100.0% | Diamond |
| Escherichia coli IAI39 | B7NIF4 | 100.0% | Diamond |
| Escherichia coli BW2952 | C4ZUT0 | 100.0% | Diamond |
| Escherichia coli K-12 | P23872 | 100.0% | Diamond |
| Mycobacterium tuberculosis CDC1551 | P9WK86 | 100.0% | Diamond |
| Mycobacterium tuberculosis H37Rv | P9WK87 | 100.0% | Diamond |
| Escherichia coli UTI89 | Q1RF59 | 100.0% | Diamond |
| Shigella sonnei Ss046 | Q3Z4S3 | 100.0% | Diamond |
| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 | Q5PFJ2 | 100.0% | Diamond |
| Escherichia coli O157:H7 | Q8XD38 | 100.0% | Diamond |
| Escherichia coli HS | A7ZXD4 | 99.7% | Diamond |
| Escherichia coli ATCC 8739 | B1IZB8 | 99.7% | Diamond |
| Shigella boydii CDC 3083-94 | B2U4S9 | 99.7% | Diamond |
| Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 | B5BD42 | 99.7% | Diamond |
| Escherichia coli UMN026 | B7N929 | 99.7% | Diamond |
| Shigella flexneri 5 str. 8401 | Q0T7A9 | 99.7% | Diamond |
| Shigella boydii Sb227 | Q325C0 | 99.7% | Diamond |
| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 | Q57S73 | 99.7% | Diamond |
| Shigella flexneri | Q83M39 | 99.7% | Diamond |
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Q8ZRA1 | 99.7% | Diamond |
| Tulipa gesneriana | R4X247 | 99.7% | Diamond |
| Escherichia coli O139:H28 str. E24377A | A7ZIN6 | 99.4% | Diamond |
| Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 | A9MW81 | 99.4% | Diamond |
| Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 | B4TMG8 | 99.4% | Diamond |
| Salmonella enterica subsp. enterica serovar Agona str. SL483 | B5EXN3 | 99.4% | Diamond |
| Escherichia coli ED1a | B7MQJ1 | 99.4% | Diamond |
| Escherichia coli O127:H6 str. E2348/69 | B7UKF6 | 99.4% | Diamond |
| Escherichia coli CFT073 | Q8FK82 | 99.4% | Diamond |
| Salmonella enterica subsp. enterica serovar Typhi | Q8Z8T1 | 99.4% | Diamond |
| Pongo abelii | Q5R8Y5 | 99.0% | Diamond |
Genomic neighbors (locus context)
Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).
| Symbol | Type | Entrez |
|---|---|---|
| MIR8077 | ncRNA | 102465875 |
| CEACAM8 | protein-coding | 1088 |
| MEGF8 | protein-coding | 1954 |
| CXCL17 | protein-coding | 284340 |
| CEACAM1 | protein-coding | 634 |
| CNFN | protein-coding | 84518 |
| LIPE-AS1 | ncRNA | 100996307 |
| PRR19 | protein-coding | 284338 |
| TMEM145 | protein-coding | 284339 |
| PAFAH1B3 | protein-coding | 5050 |
Protein
Protein identifiers
Hormone-sensitive lipase — Q05469 (reviewed: Q05469)
Alternative names: Monoacylglycerol lipase LIPE, Retinyl ester hydrolase
All UniProt accessions (7): Q05469, M0QXB1, M0QXM5, M0QY29, M0QYP8, M0R201, M0R2G1
UniProt curated annotations — full annotation on UniProt →
Function. Lipase with broad substrate specificity, catalyzing the hydrolysis of triacylglycerols (TAGs), diacylglycerols (DAGs), monoacylglycerols (MAGs), cholesteryl esters and retinyl esters. Shows a preferential hydrolysis of DAGs over TAGs and MAGs and preferentially hydrolyzes the fatty acid (FA) esters at the sn-3 position of the glycerol backbone in DAGs. Preferentially hydrolyzes FA esters at the sn-1 and sn-2 positions of the glycerol backbone in TAGs. Catalyzes the hydrolysis of 2-arachidonoylglycerol, an endocannabinoid and of 2-acetyl monoalkylglycerol ether, the penultimate precursor of the pathway for de novo synthesis of platelet-activating factor. In adipose tissue and heart, it primarily hydrolyzes stored triglycerides to free fatty acids, while in steroidogenic tissues, it principally converts cholesteryl esters to free cholesterol for steroid hormone production.
Subunit / interactions. Monomer and homodimer. Interacts with CAVIN1 in the adipocyte cytoplasm. Interacts with PLIN5.
Subcellular location. Cell membrane. Membrane. Caveola. Cytoplasm. Cytosol. Lipid droplet.
Tissue specificity. Testis.
Post-translational modifications. Phosphorylation by AMPK reduces its translocation towards the lipid droplets.
Disease relevance. Lipodystrophy, familial partial, 6 (FPLD6) [MIM:615980] An autosomal recessive form of lipodystrophy characterized by abnormal subcutaneous fat distribution. Affected individuals have increased visceral fat, impaired lipolysis, dyslipidemia, hepatic steatosis, systemic insulin resistance, and diabetes. Some patients manifest muscular dystrophy. The disease is caused by variants affecting the gene represented in this entry.
Activity regulation. Retinyl ester hydrolase is inhibited by bis-p-nitrophenyl phosphate.
Pathway. Glycerolipid metabolism; triacylglycerol degradation.
Similarity. Belongs to the ‘GDXG’ lipolytic enzyme family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q05469-1 | 1, Testicular | yes |
| Q05469-2 | 2 |
RefSeq proteins (10): NP_001403029, NP_001403030, NP_001403031, NP_001403032, NP_001403033, NP_001403034, NP_001403035, NP_001403036, NP_001403037, NP_005348* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR002168 | Aes_GDXG_HIS_AS | Active_site |
| IPR010468 | HSL_N | Domain |
| IPR013094 | AB_hydrolase_3 | Domain |
| IPR029058 | AB_hydrolase_fold | Homologous_superfamily |
| IPR033140 | Lipase_GDXG_put_SER_AS | Active_site |
Pfam: PF06350, PF07859
Enzyme classification (BRENDA)
- EC 3.1.1.79 — hormone-sensitive lipase (BRENDA: 22 organisms, 222 substrates, 108 inhibitors, 149 Km, 116 kcat entries)
Substrate kinetics (BRENDA)
64 substrates with measured Km, best-characterized 15. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| FLUORESCEIN DIACETOXYMETHYL ETHER | 0.0002–0.082 | 18 |
| FLUORESCEIN DI(METHOXY)ACETOXYMETHYL ETHER | 0.0011–0.694 | 17 |
| FLUORESCEIN BIS((5-OXAZOLYL)CARBOXYMETHYL ETHER) | — | 15 |
| CHOLESTERYL OLEATE | 0.0022–0.099 | 9 |
| 4-NITROPHENYL ACETATE | 0.28–7.42 | 7 |
| 4-NITROPHENYL BUTYRATE | 0.02–1.97 | 5 |
| 4-NITROPHENYL OLEATE | 0.268–0.462 | 4 |
| P-NITROPHENYL ACETATE | 0.28–7.42 | 4 |
| 2-NAPHTHYL ACETATE | 0.0077–5.43 | 2 |
| 4-NITROPHENYL HEXANOATE | 1.4–2.32 | 2 |
| 4-NITROPHENYL PALMITATE | 0.363–0.376 | 2 |
| P-NITROPHENYL BUTYRATE | 0.164–1.06 | 2 |
| P-NITROPHENYL HEXANOATE | 0.03–0.054 | 2 |
| VINYL ACETATE | 170–315 | 2 |
| VINYL BUTYRATE | 10–25 | 2 |
Catalyzed reactions (Rhea)
- a triacylglycerol + H2O = a diacylglycerol + a fatty acid + H(+) (RHEA:12044)
- all-trans-retinyl hexadecanoate + H2O = all-trans-retinol + hexadecanoate + H(+) (RHEA:13933)
- a monoacylglycerol + H2O = glycerol + a fatty acid + H(+) (RHEA:15245)
- 2-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-glycerol + H2O = glycerol + (5Z,8Z,11Z,14Z)-eicosatetraenoate + H(+) (RHEA:26132)
- a diacylglycerol + H2O = a monoacylglycerol + a fatty acid + H(+) (RHEA:32731)
- cholesteryl (9Z-octadecenoate) + H2O = cholesterol + (9Z)-octadecenoate + H(+) (RHEA:33875)
- 1,2-di-(9Z-octadecenoyl)-glycerol + (9Z)-octadecenoate + H(+) = 1,2,3-tri-(9Z-octadecenoyl)-glycerol + H2O (RHEA:38379)
- 2,3-di-(9Z)-octadecenoyl-sn-glycerol + H2O = 2-(9Z-octadecenoyl)-glycerol + (9Z)-octadecenoate + H(+) (RHEA:38383)
- 1,2-di-(9Z-octadecenoyl)-glycerol + H2O = (9Z-octadecenoyl)-glycerol + (9Z)-octadecenoate + H(+) (RHEA:38455)
- 1-(9Z-octadecenoyl)-glycerol + H2O = glycerol + (9Z)-octadecenoate + H(+) (RHEA:38487)
- 2-(9Z-octadecenoyl)-glycerol + H2O = glycerol + (9Z)-octadecenoate + H(+) (RHEA:38491)
- 1-O-hexadecyl-2-acetyl-sn-glycerol + H2O = 1-O-hexadecyl-sn-glycerol + acetate + H(+) (RHEA:38563)
UniProt features (91 total): helix 26, strand 15, turn 11, compositionally biased region 10, sequence variant 10, modified residue 6, region of interest 4, active site 3, sequence conflict 3, chain 1, splice variant 1, short sequence motif 1
Structure
Experimental structures (PDB)
1 structure by resolution:
| PDB | Title | Method | Resolution (Å) |
|---|---|---|---|
| 8ZVQ | Cryo-EM Structure of Human Hormone-sensitive Lipase (HSL) | ELECTRON MICROSCOPY | 3.4 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q05469-F1 | 64.77 | 0.37 |
Human Protein Atlas
Protein class: Enzymes, ENZYME proteins, Hydrolases, Metabolic proteins, Predicted intracellular proteins, Disease related genes, Potential drug targets, Human disease related genes, Congenital disorders of metabolism, Other congenital disorders of metabolism
Protein evidence: Evidence at protein level
Subcellular location (HPA, imaging): cytosol
Antibody reliability (HPA): IH enhanced · IF supported
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (3)
| Position | Role |
|---|---|
| 725 | |
| 994 | |
| 1024 |
Post-translational modifications (6)
| Type | Positions |
|---|---|
| Phosphoserine | 853, 855, 897, 929, 950, 951 |
Function
Pathways and Gene Ontology
Reactome pathways
0 curated (TAS) of 10; 0 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).
10 pathways:
| ID | Pathway | Evidence |
|---|---|---|
| R-HSA-9917777 | Epigenetic regulation by WDR5-containing histone modifying complexes | — |
| R-HSA-9851695 | Epigenetic regulation of adipogenesis genes by MLL3 and MLL4 complexes | — |
| R-HSA-212165 | Epigenetic regulation of gene expression | — |
| R-HSA-9818564 | Epigenetic regulation of gene expression by MLL3 and MLL4 complexes | — |
| R-HSA-74160 | Gene expression (Transcription) | — |
| R-HSA-9841922 | MLL4 and MLL3 complexes regulate expression of PPARG target genes in adipogenesis and hepatic steatosis | electronic |
| R-HSA-1430728 | Metabolism | — |
| R-HSA-556833 | Metabolism of lipids | — |
| R-HSA-163560 | Triglyceride catabolism | electronic |
| R-HSA-8979227 | Triglyceride metabolism | — |
MSigDB gene sets: 249 (showing top):
REACTOME_TRIGLYCERIDE_CATABOLISM, ASTON_MAJOR_DEPRESSIVE_DISORDER_DN, GOBP_REGULATION_OF_HORMONE_LEVELS, GOBP_RETINOL_METABOLIC_PROCESS, GOBP_GLYCEROLIPID_METABOLIC_PROCESS, MARTINEZ_RB1_TARGETS_UP, GOBP_NEUTRAL_LIPID_CATABOLIC_PROCESS, YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_6, GOBP_LIPID_METABOLIC_PROCESS, GOBP_TRIGLYCERIDE_CATABOLIC_PROCESS, MAGRANGEAS_MULTIPLE_MYELOMA_IGG_VS_IGA_UP, GOBP_NEUTRAL_LIPID_METABOLIC_PROCESS, NAKAYAMA_SOFT_TISSUE_TUMORS_PCA2_DN, GOBP_DIACYLGLYCEROL_METABOLIC_PROCESS, GOBP_GLYCEROLIPID_CATABOLIC_PROCESS
GO Biological Process (9): protein phosphorylation (GO:0006468), cholesterol metabolic process (GO:0008203), lipid catabolic process (GO:0016042), triglyceride catabolic process (GO:0019433), diacylglycerol catabolic process (GO:0046340), ether lipid metabolic process (GO:0046485), lipid metabolic process (GO:0006629), steroid metabolic process (GO:0008202), retinol metabolic process (GO:0042572)
GO Molecular Function (9): sterol ester esterase activity (GO:0004771), triacylglycerol lipase activity (GO:0004806), monoacylglycerol lipase activity (GO:0047372), all-trans-retinyl-palmitate hydrolase, all-trans-retinol forming activity (GO:0047376), retinyl-palmitate esterase activity (GO:0050253), diacylglycerol lipase activity (GO:0120516), protein binding (GO:0005515), lipase activity (GO:0016298), hydrolase activity (GO:0016787)
GO Cellular Component (5): lipid droplet (GO:0005811), cytosol (GO:0005829), caveola (GO:0005901), membrane (GO:0016020), plasma membrane (GO:0005886)
Reactome top-level categories
8 top-level categories:
| Category | Pathways |
|---|---|
| Triglyceride metabolism | 1 |
| Epigenetic regulation of adipogenesis genes by MLL3 and MLL4 complexes | 1 |
| Gene expression (Transcription) | 1 |
| Metabolism | 1 |
| Metabolism of lipids | 1 |
| Epigenetic regulation by WDR5-containing histone modifying complexes | 1 |
| Epigenetic regulation of gene expression by MLL3 and MLL4 complexes | 1 |
| Epigenetic regulation of gene expression | 1 |
GO top-level categories
27 GO namespaces:
| Category | Terms |
|---|---|
| lipase activity | 4 |
| carboxylic ester hydrolase activity | 4 |
| lipid metabolic process | 3 |
| acylglycerol catabolic process | 2 |
| cellular anatomical structure | 2 |
| phosphorylation | 1 |
| protein modification process | 1 |
| sterol metabolic process | 1 |
| secondary alcohol metabolic process | 1 |
| catabolic process | 1 |
| triglyceride metabolic process | 1 |
| diacylglycerol metabolic process | 1 |
| primary metabolic process | 1 |
| retinoid metabolic process | 1 |
| primary alcohol metabolic process | 1 |
| hormone metabolic process | 1 |
| olefinic compound metabolic process | 1 |
| retinyl-palmitate esterase activity | 1 |
| retinol metabolic process | 1 |
| binding | 1 |
| hydrolase activity, acting on ester bonds | 1 |
| catalytic activity | 1 |
| intracellular membraneless organelle | 1 |
| cytoplasm | 1 |
| plasma membrane raft | 1 |
| membrane | 1 |
| cell periphery | 1 |
Experimentally-supported GO annotations
GO terms backed by direct experimental evidence (ECO experimental codes) — 5 of 23 annotations. The rest are phylogenetic / computational / electronic (IEA).
5 experimentally-supported GO terms:
| GO term | NS | Evidence |
|---|---|---|
| cytosol | CC | direct assay |
| diacylglycerol lipase activity | MF | direct assay |
| retinyl-palmitate esterase activity | MF | direct assay |
| sterol ester esterase activity | MF | direct assay |
| triacylglycerol lipase activity | MF | direct assay |
Protein interactions and networks
STRING
showing 15 of 2,022 interactions by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| LIPE | PNPLA2 | Q96AD5 | 966 |
| LIPE | PLIN1 | O60240 | 938 |
| LIPE | MGLL | Q99685 | 919 |
| LIPE | ABHD5 | Q8WTS1 | 899 |
| LIPE | LPL | P06858 | 882 |
| LIPE | PNPLA3 | Q9NST1 | 848 |
| LIPE | PPARG | P37231 | 834 |
| LIPE | INS | P01308 | 832 |
| LIPE | PPARA | Q07869 | 800 |
| LIPE | UCP1 | P25874 | 786 |
| LIPE | SLC2A4 | P14672 | 785 |
| LIPE | PRKACA | P17612 | 784 |
| LIPE | PRKACG | P22612 | 782 |
| LIPE | PRKACB | P22694 | 782 |
| LIPE | ACSF2 | Q96CM8 | 782 |
IntAct
Human interaction partners of LIPE in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).
3 partners by confidence:
| Partner | Interaction type | MIscore | Records |
|---|---|---|---|
| TSGA10IP | physical association | 0.560 | 3 |
| MTNR1A | physical association | 0.000 | 1 |
| NSFL1C | physical association | 0.000 | 1 |
BioGRID (24 interactions; top human partners by supporting records): PLIN1 (FRET; 4 records), PTRF (Co-fractionation; 3 records), FABP4 (FRET; 2 records), PLIN2 (FRET; 2 records), PLIN5 (FRET; 2 records), ARF6 (Proximity Label-MS), GPR182 (Affinity Capture-MS), MTNR1A (Two-hybrid), NSFL1C (Two-hybrid), PARP9 (Proximity Label-MS), PLIN3 (Affinity Capture-Western), PRNP (Affinity Capture-MS), RELA (Affinity Capture-MS), TOPBP1 (Proximity Label-MS), TSGA10IP (Two-hybrid)
SIGNOR signaling
showing 10 of 13 signaling interactions:
| A | Effect | B | Mechanism |
|---|---|---|---|
| AMPK | down-regulates | LIPE | phosphorylation |
| CAMK2A | down-regulates | LIPE | phosphorylation |
| PRKAA1 | down-regulates | LIPE | phosphorylation |
| PRKACA | down-regulates | LIPE | phosphorylation |
| PRKACA | “up-regulates activity” | LIPE | phosphorylation |
| MAPK1 | “up-regulates activity” | LIPE | phosphorylation |
| MAPK3 | “up-regulates activity” | LIPE | phosphorylation |
| Gbeta | “up-regulates activity” | LIPE | phosphorylation |
| ERK1/2 | “up-regulates activity” | LIPE | phosphorylation |
| PKA | “up-regulates activity” | LIPE | phosphorylation |
Disease & clinical
Genetic variants
Variant evidence for LIPE: 300 ClinVar records (8 pathogenic / likely pathogenic). Per-variant detail is on Sugi Variant.
ClinVar
300 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 3 |
| Likely pathogenic | 5 |
| Uncertain significance | 187 |
| Likely benign | 54 |
| Benign | 35 |
Top pathogenic / likely-pathogenic (8)
Showing all 8 pathogenic / likely-pathogenic ClinVar records, ranked by ClinVar review status (expert panel → multiple submitters → single submitter), then by number of submitting labs.
| Variant ID | HGVS | Classification | Review | Submitters |
|---|---|---|---|---|
| 1028370 | NM_005357.4(LIPE):c.2152C>T (p.Arg718Ter) | Likely pathogenic | criteria provided, multiple submitters, no conflicts | 3 |
| 4682129 | NM_005357.4(LIPE):c.1111_1120dup (p.Arg374fs) | Pathogenic | criteria provided, single submitter | 1 |
| 4682134 | NM_005357.4(LIPE):c.235del (p.Gln79fs) | Pathogenic | criteria provided, single submitter | 1 |
| 522594 | NM_005357.4(LIPE):c.3103G>T (p.Glu1035Ter) | Likely pathogenic | criteria provided, single submitter | 2 |
| 4845693 | NM_005357.4(LIPE):c.232C>T (p.Gln78Ter) | Likely pathogenic | criteria provided, single submitter | 1 |
| 4942738 | NM_005357.4(LIPE):c.2212dup (p.Ala738fs) | Likely pathogenic | criteria provided, single submitter | 1 |
| 4942739 | NM_005357.4(LIPE):c.2062G>T (p.Glu688Ter) | Likely pathogenic | criteria provided, single submitter | 1 |
| 180647 | NM_005357.4(LIPE):c.1519_1520dup (p.Ser508fs) | Pathogenic | no assertion criteria provided | 1 |
Per-variant reference — Sugi Variant
Explore LIPE’s pathogenic and likely-pathogenic variants individually — each with its ClinVar classification and conditions, applied ACMG criteria (ClinGen expert panel, where curated), the calibrated in-silico predictors (AlphaMissense, REVEL, SaProt, conservation), gnomAD frequency, and the predictor-disagreement QC signal — on Sugi Variant.
SpliceAI
Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 40 predictions of 983):
| Position(s) | Effect | Δscore | Sites |
|---|---|---|---|
| 19:42402076–42402077 | acceptor_loss | 1.0000 | 5 |
| 19:42405384 | donor_loss | 1.0000 | |
| 19:42405562–42405563 | acceptor_loss | 1.0000 | 5 |
| 19:42407172–42407173 | donor_loss | 1.0000 | 4 |
| 19:42407469–42407470 | acceptor_loss | 1.0000 | 6 |
| 19:42407604–42407605 | donor_loss | 1.0000 | 5 |
| 19:42407792–42407793 | acceptor_loss | 1.0000 | 6 |
| 19:42407974–42407975 | donor_loss | 1.0000 | 6 |
| 19:42407987 | donor_gain | 1.0000 | |
| 19:42408014 | donor_gain | 1.0000 |
AlphaMissense
1,734 missense substitutions predicted likely pathogenic (of 6,875 scored), across 465 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:
| Residue | Likely-pathogenic substitutions | Mean am_pathogenicity | Max am_pathogenicity |
|---|---|---|---|
| D724 | 8 | 0.989 | 0.998 |
| H663 | 8 | 0.988 | 0.996 |
| H651 | 8 | 0.987 | 0.998 |
| D998 | 8 | 0.983 | 0.995 |
| D994 | 8 | 0.982 | 0.992 |
| H1024 | 8 | 0.980 | 0.996 |
| S725 | 8 | 0.977 | 0.998 |
| D772 | 8 | 0.975 | 0.988 |
| F655 | 8 | 0.970 | 0.999 |
| F1026 | 8 | 0.970 | 0.999 |
| H649 | 8 | 0.968 | 0.996 |
| D999 | 8 | 0.964 | 0.992 |
| F472 | 8 | 0.962 | 0.996 |
| F403 | 8 | 0.958 | 0.992 |
| F538 | 8 | 0.942 | 0.991 |
| D682 | 8 | 0.942 | 0.987 |
| D363 | 8 | 0.937 | 0.970 |
| F691 | 8 | 0.937 | 0.995 |
| F465 | 8 | 0.935 | 0.987 |
| F402 | 8 | 0.895 | 0.968 |
HPA cancer prognostics
RNA cancer specificity: Low cancer specificity
Human Protein Atlas survival analysis — favorable = higher expression predicts better survival.
4 prognostic cancer types:
| Cancer | Prognostic | p-value |
|---|---|---|
| Kidney Renal Clear Cell Carcinoma (validation) | favorable | 4.01e-05 |
| Kidney Renal Clear Cell Carcinoma (TCGA) | favorable | 9.48e-05 |
| Head and Neck Squamous Cell Carcinoma (TCGA) | favorable | 0.000104 |
| Pancreatic Adenocarcinoma (TCGA) | favorable | 0.000379 |
Disease associations
OMIM: gene MIM:151750 | disease phenotypes: MIM:615980 (Lipodystrophy, familial partial, type 6)
GenCC curated gene-disease
1 curated gene-disease records:
| Disease | Classification | Inheritance | Records |
|---|---|---|---|
| LIPE-related familial partial lipodystrophy | Strong | Autosomal recessive | 3 |
ClinGen Gene-Disease Validity
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
1 validity classifications:
| Disease | Classification | Inheritance |
|---|---|---|
| LIPE-related familial partial lipodystrophy | Definitive | AR |
Genomics England panels (PanelApp)
Clinical diagnostic gene panels including this gene (2 panels, 2 green/diagnostic-grade). Confidence: green = diagnostic, amber = moderate.
2 panels:
| Panel | Rating |
|---|---|
| Insulin resistance (including lipodystrophy) | green |
| Severe insulin resistance and lipodystrophy syndromes | green |
Mondo (1): LIPE-related familial partial lipodystrophy (MONDO:0014431)
Orphanet (1): LIPE-related familial partial lipodystrophy (Orphanet:435660)
HPO phenotypes
37 phenotypes (HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000147 | Polycystic ovaries |
| HP:0000468 | Increased adipose tissue around the neck |
| HP:0000819 | Diabetes mellitus |
| HP:0000822 | Hypertension |
| HP:0000831 | Insulin-resistant diabetes mellitus |
| HP:0000855 | Insulin resistance |
| HP:0000876 | Oligomenorrhea |
| HP:0000956 | Acanthosis nigricans |
| HP:0001010 | Hypopigmentation of the skin |
| HP:0001324 | Muscle weakness |
| HP:0001397 | Hepatic steatosis |
| HP:0001761 | Pes cavus |
| HP:0002155 | Hypertriglyceridemia |
| HP:0002240 | Hepatomegaly |
| HP:0002938 | Lumbar hyperlordosis |
| HP:0003077 | Hyperlipidemia |
| HP:0003119 | Abnormal circulating lipid concentration |
| HP:0003198 | Myopathy |
| HP:0003202 | Skeletal muscle atrophy |
| HP:0003236 | Elevated circulating creatine kinase activity |
| HP:0003292 | Decreased serum leptin |
| HP:0003551 | Difficulty climbing stairs |
| HP:0003560 | Muscular dystrophy |
| HP:0003635 | Loss of subcutaneous adipose tissue in limbs |
| HP:0003701 | Proximal muscle weakness |
| HP:0003712 | Skeletal muscle hypertrophy |
| HP:0007340 | Lower limb muscle weakness |
| HP:0008993 | Increased intraabdominal fat |
| HP:0008994 | Proximal lower limb muscle weakness |
| HP:0008997 | Proximal upper limb muscle weakness |
| HP:0009017 | Loss of gluteal subcutaneous adipose tissue |
| HP:0009125 | Lipodystrophy |
| HP:0011462 | Young adult onset |
| HP:0012743 | Abdominal obesity |
| HP:0012881 | Abnormal labia majora morphology |
| HP:0030685 | Decreased adiponectin level |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL3590 (SINGLE PROTEIN)
PharmGKB: 1 entry (CPIC guideline: no)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — Hydrolases & Lipases
Most potent curated ligand interactions (1 total), top 1:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| compound 41 [PMID: 15026062] | Inhibition | 9.0 | pIC50 |
Binding affinities (BindingDB)
259 measured of 342 human assays (342 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| 2-(4-(3-fluorophenyl)piperidine-1-carbonyl)-4-(2-methoxyethyl)-3-methylisoxazol-5(2H)-one | IC50 | 0.2 nM | |
| Morpholin-4-yl-carbamic acid 4-[(4-tert-butyl-cyclohexanecarbonyl)-amino]-phenyl ester | IC50 | 1 nM | |
| 4-Isopropyl-2-[4-(3-methoxy-phenyl)-piperazine-1-carbonyl]-3-methyl-2H-isoxazol-5-one | IC50 | 1 nM | |
| 4-butyl-3-methyl-2-(4-methylpiperidine-1-carbonyl)isoxazol-5(2H)-one | IC50 | 1 nM | |
| 4-Isopropyl-3-methyl-2-(piperidine-1-carbonyl)-2H-isoxazol-5-one | IC50 | 2 nM | |
| 4-Isopropyl-3-methyl-5-oxo-5H-isoxazole-2-carboxylic acid methyl-thiophen-2-ylmethyl-amide | IC50 | 2 nM | |
| 3-methyl-4-(2-phenoxyethyl)-2-(piperidine-1-carbonyl)isoxazol-5(2H)-one | IC50 | 2 nM | |
| CHEMBL4063082 | IC50 | 2 nM | |
| (5S,7S,8R)-8-hydroxy-7-propan-2-yl-2-[4-(2,2,2-trifluoroethoxy)phenyl]-2-azaspiro[4.5]decan-1-one | IC50 | 2.4 nM | US-8722721: SEC-hydroxycyclohexyl derivatives |
| (3,4-Dihydro-1H-isoquinolin-2-yl)-carbamic acid 4-tert-butoxycarbonylamino-phenyl ester | IC50 | 3 nM | |
| (5S,7R,8R)-8-hydroxy-7-propyl-2-[4-(2,2,2-trifluoroethoxy)phenyl]-2-azaspiro[4.5]decan-1-one | IC50 | 3.7 nM | US-8722721: SEC-hydroxycyclohexyl derivatives |
| 4-Isopropyl-3-methyl-5-oxo-5H-isoxazole-2-carboxylic acid furan-2-ylmethyl-methyl-amide | IC50 | 4 nM | |
| [4-(Morpholin-4-ylcarbamoyloxy)-phenyl]-acetic acid benzyl ester | IC50 | 5 nM | |
| N-benzyl-4-isopropyl-N,3-dimethyl-5-oxoisoxazole-2(5H)-carboxamide | IC50 | 5 nM | |
| 4-Benzyl-3-methyl-2-(piperidine-1-carbonyl)-2H-isoxazol-5-one | IC50 | 5 nM | |
| CHEMBL3814077 | IC50 | 7 nM | |
| 8-hydroxy-8-[(2-oxopyrrolidin-1-yl)methyl]-2-[4-(trifluoromethyl)phenyl]-2-azaspiro[4.5]decan-1-one | IC50 | 7.7 nM | US-8703807: Azaspirodecanone compounds |
| CHEMBL4101186 | IC50 | 8 nM | |
| CHEMBL4063918 | IC50 | 8 nM | |
| N-cyclohexyl-4-isopropyl-N,3-dimethyl-5-oxoisoxazole-2(5H)-carboxamide | IC50 | 9 nM | |
| 8-(2-fluoroethoxymethyl)-8-hydroxy-2-[6-[(2S)-1,1,1-trifluoropropan-2-yl]oxy-3-pyridinyl]-2-azaspiro[4.5]decan-1-one | IC50 | 10 nM | US-8703807: Azaspirodecanone compounds |
| Morpholin-4-yl-carbamic acid 4-(cyclohexanecarbonyl-amino)-phenyl ester | IC50 | 10 nM | |
| 4-isobutyl-3-methyl-2-(4-phenylpiperidine-1-carbonyl)isoxazol-5(2H)-one | IC50 | 10 nM | |
| N-(2-fluorobenzyl)-4-isopropyl-N,3-dimethyl-5-oxoisoxazole-2(5H)-carboxamide | IC50 | 10 nM | |
| 4-(2-methoxyethyl)-3-methyl-2-(piperidine-1-carbonyl)isoxazol-5(2H)-one | IC50 | 10 nM | |
| 3-Methyl-2-(piperidine-1-carbonyl)-4-(tetrahydro-thiopyran-4-yl)-2H-isoxazol-5-one | IC50 | 11 nM | |
| 4-(2-methoxyethyl)-3-methyl-2-(4-phenylpiperidine-1-carbonyl)isoxazol-5(2H)-one | IC50 | 11 nM | |
| 4-cyclohexyl-3-methyl-2-(piperidine-1-carbonyl)isoxazol-5(2H)-one | IC50 | 11 nM | |
| 2-[4-(3-Fluoro-phenyl)-piperidine-1-carbonyl]-4-isopropyl-3-methyl-2H-isoxazol-5-one | IC50 | 12 nM | |
| 4-Isopropyl-3-methyl-5-oxo-5H-isoxazole-2-carboxylic acid (3-fluoro-benzyl)-methyl-amide | IC50 | 12 nM | |
| 4-isopropyl-3-methyl-2-(4-phenylpiperidine-1-carbonyl)isoxazol-5(2H)-one | IC50 | 12 nM | |
| 3,4-dimethyl-2-(piperidine-1-carbonyl)isoxazol-5(2H)-one | IC50 | 13 nM | |
| CHEMBL4084740 | IC50 | 13 nM | |
| 8-hydroxy-2-(6-propan-2-yloxy-3-pyridinyl)-8-(2,2,2-trifluoroethoxymethyl)-2-azaspiro[4.5]decan-1-one | IC50 | 13.7 nM | US-8703807: Azaspirodecanone compounds |
| 3-Methyl-4-phenyl-2-(piperidine-1-carbonyl)-2H-isoxazol-5-one | IC50 | 14 nM | |
| 4-tert-butyl-3-methyl-2-(piperidine-1-carbonyl)isoxazol-5(2H)-one | IC50 | 14 nM | |
| CHEMBL4093111 | IC50 | 14 nM | |
| 4-isopropyl-3-methyl-2-(pyrrolidine-1-carbonyl)isoxazol-5(2H)-one | IC50 | 15 nM | |
| CHEMBL4100232 | IC50 | 16 nM | |
| (5S,7S,8R)-8-hydroxy-7-propan-2-yl-2-[4-(trifluoromethoxy)phenyl]-2-azaspiro[4.5]decan-1-one | IC50 | 16.2 nM | US-8722721: SEC-hydroxycyclohexyl derivatives |
| 8-(2,2-difluoroethoxymethyl)-8-hydroxy-2-(4-propan-2-yloxyphenyl)-2-azaspiro[4.5]decan-1-one | IC50 | 16.3 nM | US-8703807: Azaspirodecanone compounds |
| 4-{[(1H-Indol-2-yl)-methyl-amino]-methyl}-3-methyl-2-(piperidine-1-carbonyl)-2H-isoxazol-5-one | IC50 | 17 nM | |
| 4-Isopropyl-3-methyl-5-oxo-5H-isoxazole-2-carboxylic acid (4-chloro-phenyl)-methyl-amide | IC50 | 17 nM | |
| 4-isobutyl-3-methyl-2-(4-methylpiperidine-1-carbonyl)isoxazol-5(2H)-one | IC50 | 18 nM | |
| 4-ethyl-3-methyl-2-(piperidine-1-carbonyl)isoxazol-5(2H)-one | IC50 | 18 nM | |
| (3,4-Dihydro-1H-isoquinolin-2-yl)-carbamic acid 4-chloro-phenyl ester | IC50 | 19 nM | |
| CHEMBL4085494 | IC50 | 19 nM | |
| 4-(2-ethoxyethyl)-3-methyl-2-(4-methylpiperidine-1-carbonyl)isoxazol-5(2H)-one | IC50 | 20 nM | |
| 4-cyclohexyl-3-methyl-2-(4-methylpiperidine-1-carbonyl)isoxazol-5(2H)-one | IC50 | 20 nM | |
| CHEMBL4074445 | IC50 | 20 nM |
ChEMBL bioactivities
388 potent at pChembl≥5 of 390 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
PubChem BioAssay actives
268 with measured affinity, of 387 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 2-[4-(3-fluorophenyl)piperidine-1-carbonyl]-4-(2-methoxyethyl)-3-methyl-1,2-oxazol-5-one | 3416: Inhibition of forskolin-stimulated lipolysis in differentiated 3T3-L1 cells | ic50 | 0.0002 | uM |
| [4-[(4-tert-butylcyclohexanecarbonyl)amino]phenyl] N-morpholin-4-ylcarbamate | 90857: Inhibition of human recombinant hormone sensitive lipase. | ic50 | 0.0010 | uM |
| 4-butyl-3-methyl-2-(4-methylpiperidine-1-carbonyl)-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0010 | uM |
| 2-[4-(3-methoxyphenyl)piperazine-1-carbonyl]-3-methyl-4-propan-2-yl-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0010 | uM |
| [5-chloro-2-[[6-[4-(trifluoromethyl)phenoxy]pyridine-3-carbonyl]amino]phenyl]boronic acid | 1432867: Inhibition of recombinant human HSL expressed in baculovirus infected sf9 cells using PNPB as substrate after 5 mins by spectrophotometric method | ic50 | 0.0020 | uM |
| 3-methyl-2-(piperidine-1-carbonyl)-4-propan-2-yl-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0020 | uM |
| 3-methyl-4-(2-phenoxyethyl)-2-(piperidine-1-carbonyl)-1,2-oxazol-5-one | 3416: Inhibition of forskolin-stimulated lipolysis in differentiated 3T3-L1 cells | ic50 | 0.0020 | uM |
| N,3-dimethyl-5-oxo-4-propan-2-yl-N-(thiophen-2-ylmethyl)-1,2-oxazole-2-carboxamide | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0020 | uM |
| 3-methyl-2-[(3S)-3-methylpiperidine-1-carbonyl]-4-propan-2-yl-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0030 | uM |
| [4-[(2-methylpropan-2-yl)oxycarbonylamino]phenyl] N-(3,4-dihydro-1H-isoquinolin-2-yl)carbamate | 90857: Inhibition of human recombinant hormone sensitive lipase. | ic50 | 0.0030 | uM |
| 4-(2-ethoxyethyl)-3-methyl-2-(4-methylpiperidine-1-carbonyl)-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0030 | uM |
| 3-methyl-2-(4-methylpiperidine-1-carbonyl)-4-(2-methylpropyl)-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0030 | uM |
| 4-cyclohexyl-3-methyl-2-(4-methylpiperidine-1-carbonyl)-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0040 | uM |
| N-[(2-fluorophenyl)methyl]-N,3-dimethyl-5-oxo-4-propan-2-yl-1,2-oxazole-2-carboxamide | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0040 | uM |
| 3-methyl-4-(2-methylpropyl)-2-(4-phenylpiperidine-1-carbonyl)-1,2-oxazol-5-one | 3416: Inhibition of forskolin-stimulated lipolysis in differentiated 3T3-L1 cells | ic50 | 0.0040 | uM |
| 4-(2-methoxyethyl)-3-methyl-2-[4-(3-methylphenyl)piperidine-1-carbonyl]-1,2-oxazol-5-one | 3416: Inhibition of forskolin-stimulated lipolysis in differentiated 3T3-L1 cells | ic50 | 0.0040 | uM |
| 2-[4-(3-fluorophenyl)piperidine-1-carbonyl]-3-methyl-4-propan-2-yl-1,2-oxazol-5-one | 3416: Inhibition of forskolin-stimulated lipolysis in differentiated 3T3-L1 cells | ic50 | 0.0040 | uM |
| N-(furan-2-ylmethyl)-N,3-dimethyl-5-oxo-4-propan-2-yl-1,2-oxazole-2-carboxamide | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0040 | uM |
| benzyl 2-[4-(morpholin-4-ylcarbamoyloxy)phenyl]acetate | 90857: Inhibition of human recombinant hormone sensitive lipase. | ic50 | 0.0050 | uM |
| 3-methyl-4-(2-methylpropyl)-2-(piperidine-1-carbonyl)-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0050 | uM |
| 4-benzyl-3-methyl-2-(piperidine-1-carbonyl)-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0050 | uM |
| N-[(3-fluorophenyl)methyl]-N,3-dimethyl-5-oxo-4-propan-2-yl-1,2-oxazole-2-carboxamide | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0050 | uM |
| 4-(2-methoxyethyl)-3-methyl-2-(4-phenylpiperidine-1-carbonyl)-1,2-oxazol-5-one | 3416: Inhibition of forskolin-stimulated lipolysis in differentiated 3T3-L1 cells | ic50 | 0.0050 | uM |
| N-benzyl-N,3-dimethyl-5-oxo-4-propan-2-yl-1,2-oxazole-2-carboxamide | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0050 | uM |
| 4-(4-chlorophenyl)sulfanyl-3-methyl-2-(piperidine-1-carbonyl)-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0060 | uM |
| 3-methyl-2-(4-methylpiperidine-1-carbonyl)-4-(thian-4-yl)-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0060 | uM |
| 3-methyl-4-phenylsulfanyl-2-(piperidine-1-carbonyl)-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0060 | uM |
| 3-methyl-2-(4-methylpiperidine-1-carbonyl)-4-propan-2-yl-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0060 | uM |
| 4-cyclopentyl-3-methyl-2-(piperidine-1-carbonyl)-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0060 | uM |
| ethyl 1-(3-methyl-5-oxo-4-propan-2-yl-1,2-oxazole-2-carbonyl)piperidine-4-carboxylate | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0060 | uM |
| 3-methyl-2-(4-phenylpiperazine-1-carbonyl)-4-propan-2-yl-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0060 | uM |
| [2-[[4-[[5-(trifluoromethyl)-2-pyridinyl]oxy]phenyl]methoxy]phenyl]boronic acid | 1306885: Inhibition of recombinant human HSL expressed in Sf9 insect cells using PNPB as substrate measured after 5 mins by spectrophotometric method | ic50 | 0.0070 | uM |
| 4-butyl-3-methyl-2-(piperidine-1-carbonyl)-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0070 | uM |
| N,3-dimethyl-5-oxo-N-phenyl-4-propan-2-yl-1,2-oxazole-2-carboxamide | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0070 | uM |
| 2-(3,3-dimethylpiperidine-1-carbonyl)-3-methyl-4-propan-2-yl-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0070 | uM |
| [5-chloro-2-[2-oxo-2-[4-[[5-(trifluoromethyl)-2-pyridinyl]oxy]piperidin-1-yl]ethyl]phenyl]boronic acid | 1461939: Inhibition of recombinant human HSL expressed in baculovirus infected sf9 insect cells using PNPB as substrate after 5 mins by spectrophotometric analysis | ic50 | 0.0080 | uM |
| N-[4-chloro-2-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)phenyl]-6-[4-(trifluoromethyl)phenoxy]pyridine-3-carboxamide | 1432867: Inhibition of recombinant human HSL expressed in baculovirus infected sf9 cells using PNPB as substrate after 5 mins by spectrophotometric method | ic50 | 0.0080 | uM |
| 4-cyclopentyl-3-methyl-2-(4-phenylpiperidine-1-carbonyl)-1,2-oxazol-5-one | 3416: Inhibition of forskolin-stimulated lipolysis in differentiated 3T3-L1 cells | ic50 | 0.0080 | uM |
| 3-methyl-4-propan-2-yl-2-(thiomorpholine-4-carbonyl)-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0080 | uM |
| N-cyclohexyl-N,3-dimethyl-5-oxo-4-propan-2-yl-1,2-oxazole-2-carboxamide | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0090 | uM |
| [4-(cyclohexanecarbonylamino)phenyl] N-morpholin-4-ylcarbamate | 90857: Inhibition of human recombinant hormone sensitive lipase. | ic50 | 0.0100 | uM |
| 4-(2-methoxyethyl)-3-methyl-2-(piperidine-1-carbonyl)-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0100 | uM |
| 3-methyl-2-(piperidine-1-carbonyl)-4-(thian-4-yl)-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0110 | uM |
| 4-cyclohexyl-3-methyl-2-(piperidine-1-carbonyl)-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0110 | uM |
| 3-methyl-2-(4-phenylpiperidine-1-carbonyl)-4-propan-2-yl-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0120 | uM |
| [5-fluoro-2-[[6-[4-(trifluoromethyl)phenoxy]pyridine-3-carbonyl]amino]phenyl]boronic acid | 1432867: Inhibition of recombinant human HSL expressed in baculovirus infected sf9 cells using PNPB as substrate after 5 mins by spectrophotometric method | ic50 | 0.0130 | uM |
| 3,4-dimethyl-2-(piperidine-1-carbonyl)-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0130 | uM |
| N-[2-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)phenyl]-6-[4-(trifluoromethyl)phenoxy]pyridine-3-carboxamide | 1432867: Inhibition of recombinant human HSL expressed in baculovirus infected sf9 cells using PNPB as substrate after 5 mins by spectrophotometric method | ic50 | 0.0140 | uM |
| 4-tert-butyl-3-methyl-2-(piperidine-1-carbonyl)-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0140 | uM |
| 3-methyl-4-phenyl-2-(piperidine-1-carbonyl)-1,2-oxazol-5-one | 90855: Inhibition of human recombinant hormone sensitive lipase (HSL) | ic50 | 0.0140 | uM |
CTD chemical–gene interactions
46 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol S | increases expression | 3 |
| nuciferine | decreases expression, decreases reaction | 2 |
| cobaltous chloride | decreases expression | 2 |
| Air Pollutants | affects expression, increases abundance, increases expression | 2 |
| Dietary Carbohydrates | decreases expression, affects cotreatment, affects expression | 2 |
| Niacin | decreases activity, decreases expression | 2 |
| Palmitic Acid | decreases expression, decreases reaction | 2 |
| GSK-J4 | decreases expression | 1 |
| bisphenol F | increases expression | 1 |
| bisphenol A | increases expression | 1 |
| beta-lapachone | decreases expression | 1 |
| retinol palmitate | decreases reaction, increases hydrolysis | 1 |
| mono-(2-ethylhexyl)phthalate | increases expression | 1 |
| 2-chloroethyl ethyl sulfide | increases phosphorylation | 1 |
| tuberostemonine | increases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| corosolic acid | increases expression | 1 |
| bisphenol B | increases expression | 1 |
| chiglitazar | increases expression | 1 |
| dorsomorphin | decreases expression, decreases reaction | 1 |
| jinfukang | increases expression, affects cotreatment | 1 |
| bisphenol AF | increases expression | 1 |
| Tenofovir | affects expression | 1 |
| Rosiglitazone | increases expression | 1 |
| Sunitinib | decreases expression | 1 |
| Cyclic AMP | increases activity | 1 |
| Adenosine Triphosphate | increases activity | 1 |
| Cisplatin | affects cotreatment, increases expression | 1 |
| Deferoxamine | decreases expression | 1 |
| Dexamethasone | increases expression | 1 |
ChEMBL screening assays
27 unique, capped per target: 25 binding, 2 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL3606467 | Binding | Inhibition of HSL (unknown origin) | Carbamoyl Triazoles, Known Serine Protease Inhibitors, Are a Potent New Class of Antimalarials. — *J Med Chem* |
| CHEMBL615539 | Functional | Inhibition of forskolin-stimulated lipolysis in differentiated 3T3-L1 cells | In vitro SAR of (5-(2H)-isoxazolonyl) ureas, potent inhibitors of hormone-sensitive lipase. — *Bioorg Med Chem Lett* |
Clinical trials (associated diseases)
Via MONDO — disease-level, not drug-specific.
Predicted chemistry — Sugi Predict
The predicted patent-compound landscape for LIPE across ~30M SureChEMBL compounds — explore on Sugi Predict.
Related Atlas pages
- Associated diseases: LIPE-related familial partial lipodystrophy
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): LIPE-related familial partial lipodystrophy