LIPT2-AS1

Summary

LIPT2-AS1 (LIPT2 antisense RNA 1, HGNC:56172) is a long non-coding RNA gene on chromosome 11q13.4.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56172
Approved symbol	LIPT2-AS1
Name	LIPT2 antisense RNA 1
Location	11q13.4
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000254837
Ensembl biotype	lncRNA
Entrez	100287896
RNAcentral	URS0000D5866C — lncRNA, 2479 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000526036

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000526036 — 2 exons

Exon	Start	End
ENSE00002196665	74493366	74493973
ENSE00002248892	74496649	74498533

Expression profiles

Bgee: expression breadth ubiquitous, 215 present calls, max score 86.77.

Top tissues by expression

238 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	86.77	gold quality
bronchial epithelial cell	CL:0002328	85.48	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.97	gold quality
bronchus	UBERON:0002185	83.48	gold quality
Brodmann (1909) area 9	UBERON:0013540	79.86	gold quality
calcaneal tendon	UBERON:0003701	79.83	gold quality
mucosa of paranasal sinus	UBERON:0005030	79.59	gold quality
jejunal mucosa	UBERON:0000399	79.56	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	79.44	gold quality
cortical plate	UBERON:0005343	78.76	gold quality
anterior cingulate cortex	UBERON:0009835	78.67	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	78.58	gold quality
right frontal lobe	UBERON:0002810	78.43	gold quality
hypothalamus	UBERON:0001898	77.78	gold quality
spinal cord	UBERON:0002240	77.54	gold quality
islet of Langerhans	UBERON:0000006	77.18	gold quality
left ovary	UBERON:0002119	77.17	gold quality
amygdala	UBERON:0001876	77.12	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	76.88	gold quality
caudate nucleus	UBERON:0001873	76.66	gold quality
ventricular zone	UBERON:0003053	76.64	gold quality
nucleus accumbens	UBERON:0001882	76.60	gold quality
prefrontal cortex	UBERON:0000451	76.42	gold quality
palpebral conjunctiva	UBERON:0001812	76.40	gold quality
neocortex	UBERON:0001950	76.31	gold quality
nasal cavity epithelium	UBERON:0005384	76.13	silver quality
nasal cavity mucosa	UBERON:0001826	76.10	gold quality
gall bladder	UBERON:0002110	75.97	gold quality
rectum	UBERON:0001052	75.92	gold quality
substantia nigra	UBERON:0002038	75.78	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.50

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.