LLPH-DT

Summary

LLPH-DT (LLPH divergent transcript, HGNC:50493) is a long non-coding RNA gene on chromosome 12q14.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50493
Approved symbol	LLPH-DT
Name	LLPH divergent transcript
Location	12q14.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000239335
Ensembl biotype	lncRNA
Entrez	103625681
RNAcentral	URS000004F0C7 — lncRNA, 623 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000510317

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000510317 — 2 exons

Exon	Start	End
ENSE00001236879	66134052	66134449
ENSE00002241299	66130751	66130975

Expression profiles

Bgee: expression breadth ubiquitous, 126 present calls, max score 72.79.

FANTOM5 (CAGE): breadth broad, TPM avg 1.0391 / max 15.8044, expressed in 623 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
126540	1.0391	623

Top tissues by expression

126 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right adrenal gland	UBERON:0001233	72.79	gold quality
right adrenal gland cortex	UBERON:0035827	72.78	gold quality
left adrenal gland	UBERON:0001234	71.34	gold quality
left adrenal gland cortex	UBERON:0035825	70.86	gold quality
adrenal gland	UBERON:0002369	70.15	gold quality
ventricular zone	UBERON:0003053	68.46	gold quality
bone marrow cell	CL:0002092	68.42	silver quality
stromal cell of endometrium	CL:0002255	66.42	gold quality
ganglionic eminence	UBERON:0004023	65.05	gold quality
mucosa of transverse colon	UBERON:0004991	63.80	gold quality
blood	UBERON:0000178	63.00	gold quality
duodenum	UBERON:0002114	62.85	gold quality
sural nerve	UBERON:0015488	62.24	silver quality
bone marrow	UBERON:0002371	61.28	gold quality
liver	UBERON:0002107	60.51	gold quality
kidney	UBERON:0002113	60.44	gold quality
apex of heart	UBERON:0002098	60.12	gold quality
adult mammalian kidney	UBERON:0000082	60.05	gold quality
lymph node	UBERON:0000029	59.81	gold quality
heart left ventricle	UBERON:0002084	59.68	gold quality
granulocyte	CL:0000094	59.66	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.26	gold quality
cortex of kidney	UBERON:0001225	59.25	gold quality
placenta	UBERON:0001987	59.01	gold quality
monocyte	CL:0000576	58.81	gold quality
leukocyte	CL:0000738	58.80	gold quality
metanephros cortex	UBERON:0010533	58.76	gold quality
fundus of stomach	UBERON:0001160	58.55	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	58.09	gold quality
spleen	UBERON:0002106	58.08	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.