LMF1-AS1

Summary

LMF1-AS1 (LMF1 antisense RNA 1, HGNC:50469) is a long non-coding RNA gene on chromosome 16p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50469
Approved symbol	LMF1-AS1
Name	LMF1 antisense RNA 1
Location	16p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260439
Ensembl biotype	lncRNA
Entrez	101929387
RNAcentral	URS000075E6EE — lncRNA, 1477 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000567820, ENST00000569574

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000567820 — 2 exons

Exon	Start	End
ENSE00002602658	933338	934266
ENSE00002620418	921033	921167

Expression profiles

Bgee: expression breadth ubiquitous, 123 present calls, max score 69.04.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1184 / max 14.3536, expressed in 57 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
152012	0.1184	57

Top tissues by expression

123 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
C1 segment of cervical spinal cord	UBERON:0006469	69.04	gold quality
placenta	UBERON:0001987	67.64	gold quality
bone marrow cell	CL:0002092	67.50	silver quality
hindlimb stylopod muscle	UBERON:0004252	63.96	gold quality
substantia nigra	UBERON:0002038	62.55	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	60.66	silver quality
lymph node	UBERON:0000029	60.61	gold quality
skeletal muscle tissue	UBERON:0001134	60.24	gold quality
colonic epithelium	UBERON:0000397	59.61	silver quality
tonsil	UBERON:0002372	58.32	gold quality
bone marrow	UBERON:0002371	58.25	silver quality
Ammon’s horn	UBERON:0001954	58.15	gold quality
apex of heart	UBERON:0002098	57.90	gold quality
cortical plate	UBERON:0005343	57.68	silver quality
ganglionic eminence	UBERON:0004023	57.41	gold quality
spleen	UBERON:0002106	57.37	gold quality
putamen	UBERON:0001874	56.92	gold quality
prefrontal cortex	UBERON:0000451	56.91	gold quality
primary visual cortex	UBERON:0002436	56.67	gold quality
stromal cell of endometrium	CL:0002255	56.44	gold quality
corpus callosum	UBERON:0002336	54.70	gold quality
liver	UBERON:0002107	54.68	silver quality
pituitary gland	UBERON:0000007	54.35	gold quality
Brodmann (1909) area 9	UBERON:0013540	53.57	gold quality
endocervix	UBERON:0000458	53.18	gold quality
blood	UBERON:0000178	52.98	silver quality
gall bladder	UBERON:0002110	52.81	gold quality
adenohypophysis	UBERON:0002196	52.75	gold quality
hypothalamus	UBERON:0001898	52.69	gold quality
frontal cortex	UBERON:0001870	52.56	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.43

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.