LMX1B-DT

Summary

LMX1B-DT (LMX1B divergent transcript, HGNC:55849) is a long non-coding RNA gene on chromosome 9q33.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55849
Approved symbol	LMX1B-DT
Name	LMX1B divergent transcript
Location	9q33.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000224842
Ensembl biotype	lncRNA
Entrez	105376277
RNAcentral	URS00026A20E8 — lncRNA, 818 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 20 — 20 lncRNA

ENST00000425370, ENST00000432418, ENST00000451449, ENST00000760211, ENST00000760212, ENST00000760213, ENST00000760214, ENST00000760215, ENST00000760216, ENST00000760217, ENST00000760218, ENST00000760219, ENST00000760220, ENST00000760221, ENST00000760222, ENST00000760223, ENST00000760224, ENST00000760225, ENST00000760226, ENST00000760227

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000425370 — 3 exons

Exon	Start	End
ENSE00001656763	126609144	126609214
ENSE00004113584	126613449	126613699
ENSE00004113588	126608094	126608461

Expression profiles

Bgee: expression breadth ubiquitous, 117 present calls, max score 86.71.

Top tissues by expression

117 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
tonsil	UBERON:0002372	86.71	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	85.56	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.91	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	76.39	gold quality
right atrium auricular region	UBERON:0006631	67.71	gold quality
skeletal muscle tissue	UBERON:0001134	67.17	gold quality
ventricular zone	UBERON:0003053	67.15	gold quality
ganglionic eminence	UBERON:0004023	66.28	gold quality
thoracic mammary gland	UBERON:0005200	63.82	gold quality
apex of heart	UBERON:0002098	63.16	gold quality
saliva-secreting gland	UBERON:0001044	62.33	gold quality
substantia nigra	UBERON:0002038	62.10	gold quality
heart	UBERON:0000948	61.56	gold quality
skin of leg	UBERON:0001511	60.61	gold quality
zone of skin	UBERON:0000014	59.93	gold quality
kidney	UBERON:0002113	59.81	gold quality
adult mammalian kidney	UBERON:0000082	59.61	gold quality
minor salivary gland	UBERON:0001830	59.34	gold quality
adenohypophysis	UBERON:0002196	59.09	gold quality
skin of abdomen	UBERON:0001416	58.88	gold quality
heart left ventricle	UBERON:0002084	58.68	gold quality
right coronary artery	UBERON:0001625	58.42	gold quality
lymph node	UBERON:0000029	58.35	gold quality
monocyte	CL:0000576	57.91	gold quality
pituitary gland	UBERON:0000007	57.24	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	56.68	gold quality
vermiform appendix	UBERON:0001154	56.61	gold quality
thyroid gland	UBERON:0002046	56.09	gold quality
right testis	UBERON:0004534	55.83	gold quality
cortex of kidney	UBERON:0001225	55.77	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.29

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.