LNCARGI

Summary

LNCARGI (lncRNA antiviral response interferon signaling inducer, HGNC:56890) is a long non-coding RNA gene on chromosome 13q32.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56890
Approved symbol	LNCARGI
Name	lncRNA antiviral response interferon signaling inducer
Location	13q32.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	ARGI
Ensembl gene	ENSG00000285448
Ensembl biotype	lncRNA
Entrez	133395150
RNAcentral	URS0002A146B4 — lncRNA, 1589 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000646895

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000646895 — 3 exons

Exon	Start	End
ENSE00003818758	99432387	99432702
ENSE00003820993	99429211	99429928
ENSE00003825741	99431399	99431552

Expression profiles

Bgee: expression breadth broad, 59 present calls, max score 62.95.

Top tissues by expression

59 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	62.95	silver quality
ganglionic eminence	UBERON:0004023	59.69	gold quality
leukocyte	CL:0000738	55.58	gold quality
monocyte	CL:0000576	55.41	gold quality
bone marrow	UBERON:0002371	54.71	silver quality
blood	UBERON:0000178	53.19	gold quality
myometrium	UBERON:0001296	52.46	gold quality
lymph node	UBERON:0000029	52.30	gold quality
urinary bladder	UBERON:0001255	52.02	gold quality
vermiform appendix	UBERON:0001154	51.23	gold quality
caudate nucleus	UBERON:0001873	51.03	silver quality
granulocyte	CL:0000094	49.85	silver quality
prefrontal cortex	UBERON:0000451	48.79	silver quality
multicellular organism	UBERON:0000468	48.45	gold quality
endometrium	UBERON:0001295	47.92	silver quality
placenta	UBERON:0001987	47.85	silver quality
duodenum	UBERON:0002114	47.85	silver quality
muscle of leg	UBERON:0001383	47.33	silver quality
islet of Langerhans	UBERON:0000006	46.52	silver quality
tonsil	UBERON:0002372	45.73	gold quality
colon	UBERON:0001155	45.60	gold quality
cerebellar hemisphere	UBERON:0002245	45.45	silver quality
right atrium auricular region	UBERON:0006631	44.77	silver quality
spleen	UBERON:0002106	44.62	gold quality
body of pancreas	UBERON:0001150	44.10	silver quality
gastrocnemius	UBERON:0001388	43.99	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	43.74	gold quality
skin of abdomen	UBERON:0001416	43.04	silver quality
gall bladder	UBERON:0002110	42.63	silver quality
amygdala	UBERON:0001876	42.53	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.96

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.