LNCMB3

Summary

LNCMB3 (lncRNA MYC regulated medulloblastoma associated 3, HGNC:58926) is a long non-coding RNA gene on chromosome 10q26.12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58926
Approved symbol	LNCMB3
Name	lncRNA MYC regulated medulloblastoma associated 3
Location	10q26.12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000278484
Ensembl biotype	lncRNA
Entrez	105378520

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000613871, ENST00000843715, ENST00000843716

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000613871 — 2 exons

Exon	Start	End
ENSE00004269841	120984962	120985624
ENSE00004269843	120996597	120996736

Expression profiles

Bgee: expression breadth broad, 100 present calls, max score 86.11.

Top tissues by expression

100 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	86.11	gold quality
mucosa of transverse colon	UBERON:0004991	82.84	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.31	silver quality
body of stomach	UBERON:0001161	75.32	gold quality
stomach	UBERON:0000945	73.83	gold quality
fundus of stomach	UBERON:0001160	72.48	gold quality
rectum	UBERON:0001052	70.84	gold quality
transverse colon	UBERON:0001157	70.27	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	69.32	gold quality
right lung	UBERON:0002167	66.65	gold quality
colon	UBERON:0001155	65.14	gold quality
left ovary	UBERON:0002119	64.45	gold quality
cortex of kidney	UBERON:0001225	63.17	gold quality
intestine	UBERON:0000160	62.89	gold quality
ovary	UBERON:0000992	62.43	gold quality
monocyte	CL:0000576	60.59	gold quality
thoracic mammary gland	UBERON:0005200	60.52	gold quality
duodenum	UBERON:0002114	59.60	gold quality
urinary bladder	UBERON:0001255	59.47	gold quality
small intestine	UBERON:0002108	57.57	gold quality
mucosa of stomach	UBERON:0001199	57.34	gold quality
right ovary	UBERON:0002118	57.23	gold quality
small intestine Peyer’s patch	UBERON:0003454	56.93	gold quality
muscle tissue	UBERON:0002385	56.87	gold quality
prostate gland	UBERON:0002367	54.91	gold quality
lung	UBERON:0002048	54.40	gold quality
pituitary gland	UBERON:0000007	54.25	gold quality
adenohypophysis	UBERON:0002196	54.20	gold quality
smooth muscle tissue	UBERON:0001135	53.16	gold quality
upper lobe of left lung	UBERON:0008952	52.51	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.83

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.