LNCRNA-IUR

Summary

LNCRNA-IUR (lncRNA imatinib upregulated, HGNC:55755) is a long non-coding RNA gene on chromosome 11q21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55755
Approved symbol	LNCRNA-IUR
Name	lncRNA imatinib upregulated
Location	11q21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000245552
Ensembl biotype	lncRNA
Entrez	101929295
RNAcentral	URS000043ABCC — lncRNA, 1926 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 87 — 87 lncRNA

ENST00000501356, ENST00000534864, ENST00000534891, ENST00000536683, ENST00000540692, ENST00000543150, ENST00000543573, ENST00000545216, ENST00000657854, ENST00000663579, ENST00000665652, ENST00000668554, ENST00000670623, ENST00000685622, ENST00000687462, ENST00000690619, ENST00000701088, ENST00000702183, ENST00000702324, ENST00000702570, ENST00000798492, ENST00000798493, ENST00000798494, ENST00000798495, ENST00000798496, ENST00000798497, ENST00000798498, ENST00000798499, ENST00000798500, ENST00000798501, ENST00000798502, ENST00000798503, ENST00000798504, ENST00000798505, ENST00000798506, ENST00000798507, ENST00000798508, ENST00000798509, ENST00000798510, ENST00000798511, ENST00000798512, ENST00000798513, ENST00000798514, ENST00000798515, ENST00000798516, ENST00000798517, ENST00000798518, ENST00000798519, ENST00000798520, ENST00000798521, ENST00000798522, ENST00000798523, ENST00000798524, ENST00000798525, ENST00000798526, ENST00000798527, ENST00000798528, ENST00000798529, ENST00000798530, ENST00000798531, ENST00000798532, ENST00000798533, ENST00000798534, ENST00000798535, ENST00000798536, ENST00000798537, ENST00000798538, ENST00000798539, ENST00000798540, ENST00000798541, ENST00000798542, ENST00000798543, ENST00000798544, ENST00000798545, ENST00000798546, ENST00000798547, ENST00000798548, ENST00000798549, ENST00000798550, ENST00000798551, ENST00000798552, ENST00000798553, ENST00000798554, ENST00000798555, ENST00000798556, ENST00000798557, ENST00000798558

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000501356 — 3 exons

Exon	Start	End
ENSE00001544565	95158609	95159148
ENSE00001959632	95157628	95157803
ENSE00001987100	95150539	95151748

Expression profiles

Bgee: expression breadth ubiquitous, 136 present calls, max score 87.20.

Top tissues by expression

137 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.20	gold quality
calcaneal tendon	UBERON:0003701	86.51	gold quality
left testis	UBERON:0004533	85.18	gold quality
testis	UBERON:0000473	84.82	gold quality
right testis	UBERON:0004534	84.73	gold quality
colonic epithelium	UBERON:0000397	84.24	gold quality
bone marrow cell	CL:0002092	83.31	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	81.82	gold quality
tonsil	UBERON:0002372	81.64	gold quality
bone marrow	UBERON:0002371	78.59	gold quality
sural nerve	UBERON:0015488	78.04	gold quality
monocyte	CL:0000576	76.55	gold quality
leukocyte	CL:0000738	76.34	gold quality
blood	UBERON:0000178	76.29	gold quality
spleen	UBERON:0002106	74.71	gold quality
tibial nerve	UBERON:0001323	74.25	gold quality
lymph node	UBERON:0000029	74.15	gold quality
popliteal artery	UBERON:0002250	73.58	gold quality
tibial artery	UBERON:0007610	73.55	gold quality
adrenal tissue	UBERON:0018303	73.36	gold quality
granulocyte	CL:0000094	73.25	gold quality
metanephros cortex	UBERON:0010533	72.64	gold quality
right coronary artery	UBERON:0001625	72.62	gold quality
ovary	UBERON:0000992	72.42	gold quality
endometrium	UBERON:0001295	72.41	gold quality
vermiform appendix	UBERON:0001154	72.19	gold quality
left coronary artery	UBERON:0001626	72.09	gold quality
skeletal muscle tissue	UBERON:0001134	72.03	gold quality
uterine cervix	UBERON:0000002	71.91	gold quality
left ovary	UBERON:0002119	71.88	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.76

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.