LNX1-AS2

Summary

LNX1-AS2 (LNX1 antisense RNA 2, HGNC:41450) is a long non-coding RNA gene on chromosome 4q12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41450
Approved symbol	LNX1-AS2
Name	LNX1 antisense RNA 2
Location	4q12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248494
Ensembl biotype	lncRNA
Entrez	100873955
RNAcentral	URS0000759A74 — lncRNA, 1973 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000502410, ENST00000509974, ENST00000758476

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000502410 — 2 exons

Exon	Start	End
ENSE00004110427	53593845	53594185
ENSE00004110429	53592902	53593072

Expression profiles

Bgee: expression breadth ubiquitous, 121 present calls, max score 80.47.

Top tissues by expression

121 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.47	gold quality
sural nerve	UBERON:0015488	71.24	gold quality
cortical plate	UBERON:0005343	68.94	gold quality
ventricular zone	UBERON:0003053	64.24	gold quality
lower esophagus mucosa	UBERON:0035834	63.38	gold quality
islet of Langerhans	UBERON:0000006	63.35	gold quality
ganglionic eminence	UBERON:0004023	62.81	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	61.24	gold quality
left adrenal gland cortex	UBERON:0035825	60.51	gold quality
left adrenal gland	UBERON:0001234	60.14	gold quality
adrenal gland	UBERON:0002369	58.99	gold quality
lymph node	UBERON:0000029	58.98	gold quality
leukocyte	CL:0000738	58.87	gold quality
right adrenal gland cortex	UBERON:0035827	58.75	gold quality
monocyte	CL:0000576	58.56	gold quality
placenta	UBERON:0001987	58.45	gold quality
right adrenal gland	UBERON:0001233	58.38	gold quality
duodenum	UBERON:0002114	58.31	gold quality
blood	UBERON:0000178	58.28	gold quality
skeletal muscle tissue	UBERON:0001134	57.84	gold quality
vermiform appendix	UBERON:0001154	57.45	gold quality
gall bladder	UBERON:0002110	57.30	gold quality
hindlimb stylopod muscle	UBERON:0004252	57.11	gold quality
pancreas	UBERON:0001264	56.91	gold quality
cortex of kidney	UBERON:0001225	56.77	gold quality
calcaneal tendon	UBERON:0003701	55.67	gold quality
adrenal tissue	UBERON:0018303	55.17	gold quality
kidney	UBERON:0002113	55.10	gold quality
superior frontal gyrus	UBERON:0002661	54.72	gold quality
rectum	UBERON:0001052	54.41	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.94

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.