LRFN5-DT

Summary

LRFN5-DT (LRFN5 divergent transcript, HGNC:55444) is a long non-coding RNA gene on chromosome 14q21.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55444
Approved symbol	LRFN5-DT
Name	LRFN5 divergent transcript
Location	14q21.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000258636
Ensembl biotype	lncRNA
Entrez	105370469
RNAcentral	URS0002A19D20 — lncRNA, 5285 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 9 — 9 lncRNA

ENST00000557067, ENST00000661475, ENST00000745758, ENST00000745759, ENST00000745760, ENST00000745761, ENST00000745762, ENST00000745763, ENST00000745764

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000557067 — 2 exons

Exon	Start	End
ENSE00004085961	41587321	41588287
ENSE00004085974	41604754	41605992

Expression profiles

Bgee: expression breadth ubiquitous, 146 present calls, max score 81.41.

Top tissues by expression

236 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.41	gold quality
calcaneal tendon	UBERON:0003701	77.49	gold quality
adrenal tissue	UBERON:0018303	75.50	gold quality
sural nerve	UBERON:0015488	73.41	gold quality
colonic epithelium	UBERON:0000397	69.41	silver quality
right adrenal gland	UBERON:0001233	67.29	gold quality
right adrenal gland cortex	UBERON:0035827	67.24	gold quality
left adrenal gland	UBERON:0001234	67.00	gold quality
adrenal gland	UBERON:0002369	66.97	gold quality
mucosa of stomach	UBERON:0001199	66.28	gold quality
left adrenal gland cortex	UBERON:0035825	65.99	gold quality
endocervix	UBERON:0000458	65.96	gold quality
hindlimb stylopod muscle	UBERON:0004252	65.82	gold quality
adrenal cortex	UBERON:0001235	64.44	gold quality
ventricular zone	UBERON:0003053	64.19	gold quality
tendon	UBERON:0000043	63.85	gold quality
Brodmann (1909) area 9	UBERON:0013540	63.50	gold quality
islet of Langerhans	UBERON:0000006	63.43	gold quality
prefrontal cortex	UBERON:0000451	63.43	gold quality
ectocervix	UBERON:0012249	62.64	gold quality
ganglionic eminence	UBERON:0004023	61.79	gold quality
monocyte	CL:0000576	61.58	gold quality
tibial nerve	UBERON:0001323	61.55	gold quality
gall bladder	UBERON:0002110	61.09	gold quality
uterine cervix	UBERON:0000002	60.67	gold quality
cortical plate	UBERON:0005343	60.33	gold quality
left ovary	UBERON:0002119	60.18	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	60.09	gold quality
stromal cell of endometrium	CL:0002255	59.91	gold quality
hypothalamus	UBERON:0001898	59.80	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.24

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.