LRRC3B-AS1

Summary

LRRC3B-AS1 (LRRC3B antisense RNA 1, HGNC:55847) is a long non-coding RNA gene on chromosome 3p24.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55847
Approved symbol	LRRC3B-AS1
Name	LRRC3B antisense RNA 1
Location	3p24.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000225386
Ensembl biotype	lncRNA
Entrez	105377003
RNAcentral	URS00026A2654 — lncRNA, 4242 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 10 — 10 lncRNA

ENST00000435884, ENST00000757437, ENST00000757438, ENST00000757439, ENST00000757440, ENST00000757441, ENST00000757442, ENST00000757443, ENST00000757444, ENST00000757445

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000435884 — 4 exons

Exon	Start	End
ENSE00001602678	26619702	26619848
ENSE00001670950	26614261	26619506
ENSE00001704562	26620933	26620972
ENSE00001775757	26622601	26622943

Expression profiles

Bgee: expression breadth broad, 55 present calls, max score 67.14.

Top tissues by expression

55 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ventricular zone	UBERON:0003053	67.14	gold quality
ganglionic eminence	UBERON:0004023	63.74	gold quality
skeletal muscle tissue	UBERON:0001134	61.76	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.38	gold quality
cortical plate	UBERON:0005343	59.23	silver quality
colon	UBERON:0001155	56.13	gold quality
blood	UBERON:0000178	51.54	gold quality
endometrium	UBERON:0001295	51.51	silver quality
prefrontal cortex	UBERON:0000451	51.44	gold quality
muscle of leg	UBERON:0001383	51.28	gold quality
gastrocnemius	UBERON:0001388	49.67	gold quality
putamen	UBERON:0001874	49.01	gold quality
monocyte	CL:0000576	48.70	silver quality
amygdala	UBERON:0001876	48.65	gold quality
nucleus accumbens	UBERON:0001882	47.26	gold quality
caudate nucleus	UBERON:0001873	47.25	gold quality
frontal cortex	UBERON:0001870	47.15	gold quality
cerebellum	UBERON:0002037	46.49	silver quality
cerebellar cortex	UBERON:0002129	46.39	silver quality
cerebellar hemisphere	UBERON:0002245	46.24	silver quality
brain	UBERON:0000955	45.97	gold quality
cerebral cortex	UBERON:0000956	45.88	gold quality
anterior cingulate cortex	UBERON:0009835	45.85	gold quality
right hemisphere of cerebellum	UBERON:0014890	45.56	silver quality
Ammon’s horn	UBERON:0001954	45.54	gold quality
superior frontal gyrus	UBERON:0002661	45.38	silver quality
skin of leg	UBERON:0001511	44.82	silver quality
heart left ventricle	UBERON:0002084	44.77	silver quality
urinary bladder	UBERON:0001255	43.64	gold quality
Brodmann (1909) area 9	UBERON:0013540	43.55	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.97

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.