LRRC7-AS1

Summary

LRRC7-AS1 (LRRC7 antisense RNA 1, HGNC:40843) is a long non-coding RNA gene on chromosome 1p31.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40843
Approved symbol	LRRC7-AS1
Name	LRRC7 antisense RNA 1
Location	1p31.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000237919
Ensembl biotype	lncRNA
Entrez	105378792
RNAcentral	URS00026A1AE3 — lncRNA, 3161 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000414132, ENST00000425754

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000414132 — 4 exons

Exon	Start	End
ENSE00001608896	70013982	70014144
ENSE00001629479	70021248	70021379
ENSE00001630387	70022262	70022398
ENSE00001765021	70031132	70031222

Expression profiles

Bgee: expression breadth broad, 87 present calls, max score 84.84.

Top tissues by expression

87 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
corpus callosum	UBERON:0002336	84.84	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.53	silver quality
right testis	UBERON:0004534	73.02	gold quality
left testis	UBERON:0004533	72.08	gold quality
testis	UBERON:0000473	71.24	gold quality
cortical plate	UBERON:0005343	70.07	gold quality
ganglionic eminence	UBERON:0004023	69.43	gold quality
skeletal muscle tissue	UBERON:0001134	64.63	silver quality
sural nerve	UBERON:0015488	64.24	gold quality
lymph node	UBERON:0000029	58.62	gold quality
prefrontal cortex	UBERON:0000451	55.45	gold quality
monocyte	CL:0000576	55.22	gold quality
stomach	UBERON:0000945	55.10	gold quality
nucleus accumbens	UBERON:0001882	53.86	gold quality
gall bladder	UBERON:0002110	53.31	gold quality
superior frontal gyrus	UBERON:0002661	53.09	gold quality
caudate nucleus	UBERON:0001873	52.13	gold quality
primary visual cortex	UBERON:0002436	51.84	gold quality
blood	UBERON:0000178	51.40	gold quality
multicellular organism	UBERON:0000468	51.39	gold quality
putamen	UBERON:0001874	51.30	gold quality
substantia nigra	UBERON:0002038	51.15	gold quality
hypothalamus	UBERON:0001898	51.13	gold quality
calcaneal tendon	UBERON:0003701	51.12	silver quality
brain	UBERON:0000955	50.98	gold quality
frontal cortex	UBERON:0001870	50.76	gold quality
adrenal tissue	UBERON:0018303	50.74	gold quality
amygdala	UBERON:0001876	50.70	gold quality
liver	UBERON:0002107	50.54	silver quality
kidney	UBERON:0002113	50.32	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.60

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.