LY6G5C-AS1

Summary

LY6G5C-AS1 (LY6G5C antisense RNA 1, HGNC:59160) is a long non-coding RNA gene on chromosome 6p21.33.

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:59160
Approved symbol	LY6G5C-AS1
Name	LY6G5C antisense RNA 1
Location	6p21.33
Locus type	RNA, long non-coding
Status	Approved
Entrez	105375019

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1000350287 (6:31685212 A>G), RS1000423798 (6:31685558 C>A), RS1001503218 (6:31683999 T>C), RS1001912133 (6:31682047 A>AT), RS1001916948 (6:31681021 C>A,T), RS1002263245 (6:31681565 G>A,C), RS1002273140 (6:31681645 C>T), RS1002518019 (6:31685329 C>A), RS1002591515 (6:31685574 C>T), RS1003598515 (6:31683848 G>A,T), RS1004213544 (6:31683306 G>A), RS1004705275 (6:31683722 T>C), RS1004917360 (6:31683565 G>A), RS1005937575 (6:31684990 G>C), RS1006384641 (6:31682029 G>A)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.