MAGI1-AS1

Summary

MAGI1-AS1 (MAGI1 antisense RNA 1, HGNC:40091) is a long non-coding RNA gene on chromosome 3p14.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40091
Approved symbol	MAGI1-AS1
Name	MAGI1 antisense RNA 1
Location	3p14.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000240175
Ensembl biotype	lncRNA
Entrez	100873983
RNAcentral	URS000075D3A0 — lncRNA, 605 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000472514

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000472514 — 3 exons

Exon	Start	End
ENSE00001863347	65914091	65914181
ENSE00001925925	65924900	65925297
ENSE00001942473	65893816	65893917

Expression profiles

Bgee: expression breadth ubiquitous, 103 present calls, max score 97.38.

Top tissues by expression

103 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	97.38	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.66	gold quality
colonic epithelium	UBERON:0000397	80.83	gold quality
tonsil	UBERON:0002372	75.91	gold quality
skeletal muscle tissue	UBERON:0001134	71.08	gold quality
corpus callosum	UBERON:0002336	70.96	gold quality
liver	UBERON:0002107	68.06	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	67.56	gold quality
calcaneal tendon	UBERON:0003701	66.91	gold quality
adrenal tissue	UBERON:0018303	65.07	gold quality
kidney	UBERON:0002113	60.97	gold quality
urinary bladder	UBERON:0001255	59.29	gold quality
blood	UBERON:0000178	58.45	gold quality
lung	UBERON:0002048	58.20	gold quality
hindlimb stylopod muscle	UBERON:0004252	56.18	gold quality
uterine cervix	UBERON:0000002	55.69	gold quality
adult mammalian kidney	UBERON:0000082	54.81	gold quality
islet of Langerhans	UBERON:0000006	54.69	gold quality
muscle of leg	UBERON:0001383	53.85	gold quality
cortex of kidney	UBERON:0001225	52.63	gold quality
stomach	UBERON:0000945	52.48	gold quality
endometrium	UBERON:0001295	52.08	gold quality
monocyte	CL:0000576	52.07	gold quality
thoracic mammary gland	UBERON:0005200	50.54	gold quality
primary visual cortex	UBERON:0002436	50.35	silver quality
prefrontal cortex	UBERON:0000451	49.71	gold quality
myometrium	UBERON:0001296	49.69	gold quality
right lobe of liver	UBERON:0001114	49.45	gold quality
adrenal gland	UBERON:0002369	49.35	gold quality
prostate gland	UBERON:0002367	49.33	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.67

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.