MAML3
geneOn this page
Also known as KIAA1816MAM2CAGH3GDN
Summary
MAML3 (mastermind like transcriptional coactivator 3, HGNC:16272) is a protein-coding gene on chromosome 4q31.1, encoding Mastermind-like protein 3 (Q96JK9). Acts as a transcriptional coactivator for NOTCH proteins.
Enables transcription coactivator activity. Involved in Notch signaling pathway and positive regulation of transcription by RNA polymerase II. Located in nuclear speck.
Source: NCBI Gene 55534 — RefSeq curated summary.
At a glance
- GWAS associations: 26
- Clinical variants (ClinVar): 96 total
- MANE Select transcript:
NM_018717
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:16272 |
| Approved symbol | MAML3 |
| Name | mastermind like transcriptional coactivator 3 |
| Location | 4q31.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | KIAA1816, MAM2, CAGH3, GDN |
| Ensembl gene | ENSG00000196782 |
| Ensembl biotype | protein_coding |
| OMIM | 608991 |
| Entrez | 55534 |
Gene structure
Transcript identifiers
Ensembl transcripts: 3 — 3 protein_coding
ENST00000502696, ENST00000509479, ENST00000899537
RefSeq mRNA: 1 — MANE Select: NM_018717
NM_018717
CCDS: CCDS54805
Canonical transcript exons
ENST00000509479 — 5 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001481480 | 139725751 | 139725835 |
| ENSE00001481481 | 139730416 | 139730667 |
| ENSE00001623169 | 139889357 | 139890967 |
| ENSE00002031346 | 140152860 | 140154184 |
| ENSE00003401959 | 139716753 | 139720323 |
Expression profiles
Bgee: expression breadth ubiquitous, 235 present calls, max score 90.08.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 3.5307 / max 99.6345, expressed in 1117 samples.
FANTOM5 promoters (5 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 54115 | 3.0770 | 1072 |
| 54109 | 0.1478 | 50 |
| 54113 | 0.1262 | 47 |
| 54116 | 0.0904 | 29 |
| 54110 | 0.0892 | 36 |
Top tissues by expression
276 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| germinal epithelium of ovary | UBERON:0001304 | 90.08 | gold quality |
| esophagus squamous epithelium | UBERON:0006920 | 87.75 | gold quality |
| corpus epididymis | UBERON:0004359 | 86.65 | gold quality |
| gingival epithelium | UBERON:0001949 | 85.42 | gold quality |
| gingiva | UBERON:0001828 | 84.36 | gold quality |
| skin of hip | UBERON:0001554 | 83.31 | gold quality |
| cauda epididymis | UBERON:0004360 | 82.83 | gold quality |
| parotid gland | UBERON:0001831 | 82.64 | gold quality |
| visceral pleura | UBERON:0002401 | 82.62 | gold quality |
| adrenal tissue | UBERON:0018303 | 81.91 | gold quality |
| sural nerve | UBERON:0015488 | 81.85 | gold quality |
| epithelium of esophagus | UBERON:0001976 | 81.59 | gold quality |
| parietal pleura | UBERON:0002400 | 81.41 | gold quality |
| caput epididymis | UBERON:0004358 | 81.29 | gold quality |
| monocyte | CL:0000576 | 81.16 | gold quality |
| amniotic fluid | UBERON:0000173 | 81.03 | gold quality |
| pleura | UBERON:0000977 | 81.03 | gold quality |
| mononuclear cell | CL:0000842 | 80.87 | gold quality |
| upper leg skin | UBERON:0004262 | 80.50 | gold quality |
| leukocyte | CL:0000738 | 80.47 | gold quality |
| lower lobe of lung | UBERON:0008949 | 80.38 | gold quality |
| squamous epithelium | UBERON:0006914 | 79.69 | gold quality |
| palpebral conjunctiva | UBERON:0001812 | 79.23 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 78.86 | gold quality |
| blood | UBERON:0000178 | 78.55 | gold quality |
| tibia | UBERON:0000979 | 78.48 | gold quality |
| oral cavity | UBERON:0000167 | 78.44 | gold quality |
| calcaneal tendon | UBERON:0003701 | 77.82 | gold quality |
| endothelial cell | CL:0000115 | 77.10 | gold quality |
| cortical plate | UBERON:0005343 | 77.09 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 4.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-35 | yes | 39.58 |
| E-CURD-119 | yes | 22.15 |
| E-HCAD-25 | yes | 16.24 |
| E-ANND-3 | yes | 8.34 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
125 targeting MAML3, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-3924 | 100.00 | 72.09 | 2394 |
| HSA-MIR-4673 | 100.00 | 66.64 | 1490 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-186-5P | 99.99 | 70.83 | 3707 |
| HSA-MIR-548N | 99.98 | 71.94 | 4170 |
| HSA-MIR-548AJ-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-548X-3P | 99.96 | 73.38 | 5345 |
| HSA-MIR-495-3P | 99.96 | 72.81 | 4197 |
| HSA-MIR-5688 | 99.96 | 73.23 | 4504 |
| HSA-MIR-493-5P | 99.96 | 72.47 | 2382 |
| HSA-MIR-6825-5P | 99.96 | 69.81 | 3431 |
| HSA-LET-7C-3P | 99.95 | 73.42 | 2862 |
| HSA-MIR-548J-3P | 99.94 | 72.61 | 4881 |
| HSA-MIR-101-3P | 99.94 | 75.03 | 2230 |
| HSA-MIR-144-3P | 99.94 | 73.98 | 2698 |
| HSA-MIR-651-3P | 99.94 | 73.48 | 5177 |
| HSA-MIR-6845-3P | 99.94 | 66.88 | 1439 |
| HSA-MIR-548AE-3P | 99.93 | 72.66 | 4867 |
| HSA-MIR-548AH-3P | 99.93 | 72.54 | 4872 |
| HSA-MIR-548AM-3P | 99.93 | 72.54 | 4872 |
| HSA-MIR-548AQ-3P | 99.93 | 72.66 | 4867 |
| HSA-MIR-6721-5P | 99.93 | 68.92 | 2981 |
| HSA-MIR-6508-5P | 99.92 | 70.67 | 2465 |
| HSA-MIR-454-3P | 99.91 | 74.01 | 1925 |
| HSA-MIR-3686 | 99.90 | 70.53 | 2432 |
| HSA-MIR-130A-3P | 99.90 | 73.31 | 1861 |
| HSA-MIR-130B-3P | 99.90 | 73.27 | 1850 |
Literature-anchored findings (GeneRIF, showing 10)
- Identification of new human proteins defines a family that consists of positive regulators for notch signaling (PMID:12386158)
- Suggest that hypoxia promotes SMO transcription through upregulation of MAML3 and RBPJ to induce proliferation, invasiveness and tumorigenesis in pancreatic cancer. (PMID:26655998)
- The present study further expands the genetic spectrum of small blue round cell tumors, with 2 novel fusions, BCOR-MAML3 and ZC3H7B-BCOR, identified (PMID:26752546)
- Results show that overexpression of MAML3 confers resistance to retinoic acid in multiple neuroblastoma cell lines. (PMID:26785999)
- These results suggest that PSK suppresses Hedgehog signaling through down-regulation of MAML3 and RBPJ transcription under hypoxia, inhibiting the induction of a malignant phenotype in pancreatic cancer. Our results may lead to development of new treatments for refractory pancreatic cancer using PSK as a Hedgehog inhibitor (PMID:27466498)
- PTTG1IP and MAML3 are associated with BHR severity in adult asthma. The relevance of these genes is supported by the eQTL analyses and co-expression of PTTG1lP with vimentin and E-cadherin1, and MAML3 with MAML2. (PMID:27709636)
- These findings indicate that the miR-2392-MAML3/WHSC1-Slug/Twist1 regulatory axis plays a critical role in GC metastasis. (PMID:28512191)
- RBPJ and MAML3 could be new therapeutic targets for SCLC. (PMID:30061220)
- Mastermind Like Transcriptional Coactivator 3 (MAML3) Drives Neuroendocrine Tumor Progression. (PMID:33986121)
- MAML3 Contributes to Induction of Malignant Phenotype of Gallbladder Cancer Through Morphogenesis Signalling Under Hypoxia. (PMID:37351966)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | maml3 | ENSDARG00000079552 |
| mus_musculus | Maml3 | ENSMUSG00000061143 |
| rattus_norvegicus | Maml3 | ENSRNOG00000067338 |
Paralogs (2): MAML1 (ENSG00000161021), MAML2 (ENSG00000184384)
Protein
Protein identifiers
Mastermind-like protein 3 — Q96JK9 (reviewed: Q96JK9)
All UniProt accessions (2): H0Y920, Q96JK9
UniProt curated annotations — full annotation on UniProt →
Function. Acts as a transcriptional coactivator for NOTCH proteins. Has been shown to amplify NOTCH-induced transcription of HES1.
Subunit / interactions. Interacts through its N-terminal region with the ankyrin repeat region of the Notch proteins NOTCH1, NOTCH2, NOTCH3 and NOTCH4. Forms a DNA-binding complex with Notch proteins and RBPSUH/RBP-J kappa.
Subcellular location. Nucleus speckle.
Domain organisation. The C-terminal domain is required for transcriptional activation.
Similarity. Belongs to the mastermind family.
RefSeq proteins (1): NP_061187* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR019082 | Mastermind-like_N | Domain |
| IPR046369 | MAML1-3 | Family |
| IPR046370 | MAML_N_sf | Homologous_superfamily |
| IPR048455 | MAML1_3_TAD2 | Domain |
Pfam: PF09596, PF20801
UniProt features (27 total): region of interest 11, compositionally biased region 11, sequence conflict 2, chain 1, modified residue 1, sequence variant 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q96JK9-F1 | 47.21 | 0.05 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (1): 603
Function
Pathways and Gene Ontology
Reactome pathways
31 pathways
| ID | Pathway |
|---|---|
| R-HSA-1912408 | Pre-NOTCH Transcription and Translation |
| R-HSA-210744 | Regulation of gene expression in late stage (branching morphogenesis) pancreatic bud precursor cells |
| R-HSA-2122947 | NOTCH1 Intracellular Domain Regulates Transcription |
| R-HSA-2197563 | NOTCH2 intracellular domain regulates transcription |
| R-HSA-2644606 | Constitutive Signaling by NOTCH1 PEST Domain Mutants |
| R-HSA-2894862 | Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants |
| R-HSA-350054 | Notch-HLH transcription pathway |
| R-HSA-8941856 | RUNX3 regulates NOTCH signaling |
| R-HSA-9013508 | NOTCH3 Intracellular Domain Regulates Transcription |
| R-HSA-9013695 | NOTCH4 Intracellular Domain Regulates Transcription |
| R-HSA-9793380 | Formation of paraxial mesoderm |
| R-HSA-9976102 | Differentiation of naive CD4+ T cells to T helper 2 cells (Th2 cells) |
| R-HSA-1266738 | Developmental Biology |
| R-HSA-157118 | Signaling by NOTCH |
| R-HSA-162582 | Signal Transduction |
| R-HSA-1643685 | Disease |
| R-HSA-186712 | Regulation of beta-cell development |
| R-HSA-1912422 | Pre-NOTCH Expression and Processing |
| R-HSA-1980143 | Signaling by NOTCH1 |
| R-HSA-1980145 | Signaling by NOTCH2 |
| R-HSA-212436 | Generic Transcription Pathway |
| R-HSA-2644602 | Signaling by NOTCH1 PEST Domain Mutants in Cancer |
| R-HSA-2644603 | Signaling by NOTCH1 in Cancer |
| R-HSA-2894858 | Signaling by NOTCH1 HD+PEST Domain Mutants in Cancer |
| R-HSA-5663202 | Diseases of signal transduction by growth factor receptors and second messengers |
| R-HSA-73857 | RNA Polymerase II Transcription |
| R-HSA-74160 | Gene expression (Transcription) |
| R-HSA-8878159 | Transcriptional regulation by RUNX3 |
| R-HSA-9012852 | Signaling by NOTCH3 |
| R-HSA-9013694 | Signaling by NOTCH4 |
MSigDB gene sets: 215 (showing top):
RNGTGGGC_UNKNOWN, REACTOME_SIGNALING_BY_NOTCH, AAGCAAT_MIR137, NKX25_02, CHUNG_BLISTER_CYTOTOXICITY_DN, FOXO4_01, ACTGCAG_MIR173P, GTACAGG_MIR486, MOLENAAR_TARGETS_OF_CCND1_AND_CDK4_UP, GATA3_01, FREAC3_01, GATA1_01, WTGAAAT_UNKNOWN, ZIC1_01, AAAGGGA_MIR204_MIR211
GO Biological Process (3): Notch signaling pathway (GO:0007219), positive regulation of transcription of Notch receptor target (GO:0007221), positive regulation of transcription by RNA polymerase II (GO:0045944)
GO Molecular Function (2): transcription coactivator activity (GO:0003713), protein binding (GO:0005515)
GO Cellular Component (3): nucleus (GO:0005634), nucleoplasm (GO:0005654), nuclear speck (GO:0016607)
Reactome top-level categories
Rollup of top-15 pathways:
| Category | Pathways |
|---|---|
| Signaling by NOTCH | 3 |
| Pre-NOTCH Expression and Processing | 1 |
| Regulation of beta-cell development | 1 |
| Signaling by NOTCH1 | 1 |
| Signaling by NOTCH2 | 1 |
| Signaling by NOTCH1 PEST Domain Mutants in Cancer | 1 |
| Signaling by NOTCH1 HD+PEST Domain Mutants in Cancer | 1 |
| Generic Transcription Pathway | 1 |
| Transcriptional regulation by RUNX3 | 1 |
| Signaling by NOTCH3 | 1 |
| Signaling by NOTCH4 | 1 |
| Gastrulation | 1 |
| Differentiation of T cells | 1 |
| Signal Transduction | 1 |
| Developmental Biology | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| positive regulation of DNA-templated transcription | 2 |
| cell surface receptor signaling pathway | 1 |
| Notch signaling pathway | 1 |
| positive regulation of transcription by RNA polymerase II | 1 |
| regulation of transcription by RNA polymerase II | 1 |
| transcription by RNA polymerase II | 1 |
| transcription coregulator activity | 1 |
| binding | 1 |
| intracellular membrane-bounded organelle | 1 |
| nuclear lumen | 1 |
| cellular anatomical structure | 1 |
| nuclear ribonucleoprotein granule | 1 |
Protein interactions and networks
STRING
1180 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| MAML3 | RBPJ | Q06330 | 999 |
| MAML3 | NOTCH1 | P46531 | 996 |
| MAML3 | NOTCH4 | Q99466 | 909 |
| MAML3 | ANK1 | P16157 | 870 |
| MAML3 | NOTCH3 | Q9UM47 | 863 |
| MAML3 | ANK3 | Q12955 | 860 |
| MAML3 | ANK2 | Q01484 | 854 |
| MAML3 | GNLY | P09325 | 827 |
| MAML3 | JAG1 | P78504 | 745 |
| MAML3 | CRTC1 | Q6UUV9 | 745 |
| MAML3 | DLL1 | O00548 | 723 |
| MAML3 | JAG2 | Q9Y219 | 710 |
| MAML3 | SRRT | Q9BXP5 | 690 |
| MAML3 | EP300 | Q09472 | 683 |
| MAML3 | DLL4 | Q9NR61 | 676 |
IntAct
14 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| MAML3 | NOTCH1 | psi-mi:“MI:0915”(physical association) | 0.550 |
| MAML3 | NOTCH1 | psi-mi:“MI:0915”(physical association) | 0.500 |
| MAML3 | NOTCH1 | psi-mi:“MI:0914”(association) | 0.500 |
| MAML3 | H2BC9 | psi-mi:“MI:0915”(physical association) | 0.400 |
| RAI1 | MAML3 | psi-mi:“MI:0915”(physical association) | 0.370 |
| ZBTB1 | MAML3 | psi-mi:“MI:0915”(physical association) | 0.370 |
| SCMH1 | MAML3 | psi-mi:“MI:0915”(physical association) | 0.370 |
| ZZZ3 | MAML3 | psi-mi:“MI:0915”(physical association) | 0.370 |
| NFX1 | MAML3 | psi-mi:“MI:0915”(physical association) | 0.370 |
| SUPT5H | MAML3 | psi-mi:“MI:0915”(physical association) | 0.370 |
| NOTCH1 | CNOT1 | psi-mi:“MI:0914”(association) | 0.350 |
| CDC20 | MAML3 | psi-mi:“MI:0915”(physical association) | 0.000 |
| MAML3 | agaY | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (21): RBPJ (Affinity Capture-Western), MAML3 (Affinity Capture-RNA), MAML3 (Affinity Capture-RNA), MAML3 (Two-hybrid), MAML3 (Two-hybrid), MAML3 (Proximity Label-MS), MAML3 (Proximity Label-MS), MAML1 (Affinity Capture-Western), MAML3 (Two-hybrid), MAML3 (Proximity Label-MS), MAML3 (Affinity Capture-MS), MAML3 (Affinity Capture-MS), MAML3 (Affinity Capture-RNA), MAML3 (Proximity Label-MS), MAML3 (Two-hybrid)
ESM2 similar proteins: A0A3Q7JC00, A0JM64, A0JNC2, A2VE44, A4IHD9, B2C6R6, B5DE09, B8BCZ8, E7F1H9, F4JT98, O09000, O57539, P78364, Q0WVM7, Q15596, Q17BA4, Q2NLB0, Q3TCX3, Q5RDA3, Q5TP13, Q5ZL54, Q61026, Q64028, Q6GP15, Q6K271, Q6NS15, Q6PEH8, Q71SY5, Q7XYY2, Q7ZVN7, Q80TM6, Q8C7E9, Q8CHY6, Q8HXM1, Q8IZL2, Q8VCB2, Q8W234, Q90WJ3, Q924H2, Q940A7
Diamond homologs: Q6T264, Q8IZL2, Q92585, Q96JK9
SIGNOR signaling
7 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| RBPJ | up-regulates | MAML3 | binding |
| MAML3 | up-regulates | NOTCH | binding |
| NOTCH | up-regulates | MAML3 | binding |
| MAML3 | up-regulates | NOTCH2 | binding |
| MAML3 | up-regulates | NOTCH3 | binding |
| MAML3 | up-regulates | NOTCH4 | binding |
| NOTCH4 | up-regulates | MAML3 | binding |
Disease & clinical
Clinical variants and AI predictions
ClinVar
96 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 77 |
| Likely benign | 4 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
3427 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 4:139725833:CTG:C | acceptor_gain | 1.0000 |
| 4:139753731:AG:A | donor_gain | 1.0000 |
| 4:139753731:AGCC:A | donor_gain | 1.0000 |
| 4:139753732:G:C | donor_gain | 1.0000 |
| 4:139889352:CTTA:C | donor_loss | 1.0000 |
| 4:139889353:TTA:T | donor_loss | 1.0000 |
| 4:139889354:TA:T | donor_loss | 1.0000 |
| 4:139889355:ACC:A | donor_loss | 1.0000 |
| 4:139890963:TGTAG:T | acceptor_gain | 1.0000 |
| 4:139890964:GTAG:G | acceptor_gain | 1.0000 |
| 4:139890965:TAG:T | acceptor_gain | 1.0000 |
| 4:139890966:AG:A | acceptor_gain | 1.0000 |
| 4:139890967:GC:G | acceptor_loss | 1.0000 |
| 4:139890968:C:CC | acceptor_gain | 1.0000 |
| 4:139890969:T:A | acceptor_loss | 1.0000 |
| 4:140062094:AGGAG:A | donor_gain | 1.0000 |
| 4:139725745:CCTCA:C | donor_loss | 0.9900 |
| 4:139725746:CTCA:C | donor_loss | 0.9900 |
| 4:139725747:T:TA | donor_loss | 0.9900 |
| 4:139725748:CA:C | donor_loss | 0.9900 |
| 4:139725749:A:AA | donor_loss | 0.9900 |
| 4:139725750:C:A | donor_loss | 0.9900 |
| 4:139725832:ACTGC:A | acceptor_gain | 0.9900 |
| 4:139725833:CTGCT:C | acceptor_gain | 0.9900 |
| 4:139725834:TG:T | acceptor_gain | 0.9900 |
| 4:139725836:C:CC | acceptor_gain | 0.9900 |
| 4:139730410:TGTTA:T | donor_loss | 0.9900 |
| 4:139730411:GTTAC:G | donor_loss | 0.9900 |
| 4:139730412:TTACC:T | donor_loss | 0.9900 |
| 4:139730413:TA:T | donor_loss | 0.9900 |
AlphaMissense
7554 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 4:139890453:A:G | L328P | 1.000 |
| 4:139890477:A:T | V320D | 1.000 |
| 4:139890489:A:G | L316S | 1.000 |
| 4:139890501:A:G | L312S | 1.000 |
| 4:139890509:C:A | W309C | 1.000 |
| 4:139890509:C:G | W309C | 1.000 |
| 4:139890511:A:G | W309R | 1.000 |
| 4:139890511:A:T | W309R | 1.000 |
| 4:139890525:A:G | L304P | 1.000 |
| 4:139890525:A:T | L304Q | 1.000 |
| 4:140153066:G:C | H88D | 1.000 |
| 4:140153074:C:G | R85P | 1.000 |
| 4:140153075:G:T | R85S | 1.000 |
| 4:140153086:A:C | I81S | 1.000 |
| 4:140153086:A:T | I81N | 1.000 |
| 4:140153089:C:G | R80P | 1.000 |
| 4:140153090:G:T | R80S | 1.000 |
| 4:140153095:C:G | R78P | 1.000 |
| 4:140153096:G:T | R78S | 1.000 |
| 4:140153098:A:C | L77R | 1.000 |
| 4:140153098:A:G | L77P | 1.000 |
| 4:140153098:A:T | L77H | 1.000 |
| 4:140153101:C:G | R76P | 1.000 |
| 4:139890450:A:G | F329S | 0.999 |
| 4:139890453:A:T | L328Q | 0.999 |
| 4:139890510:C:G | W309S | 0.999 |
| 4:139890513:T:A | E308V | 0.999 |
| 4:139890513:T:C | E308G | 0.999 |
| 4:139890514:C:T | E308K | 0.999 |
| 4:139890525:A:C | L304R | 0.999 |
dbSNP variants (sampled 300 via entrez): RS1000002789 (4:139761106 G>A), RS1000011223 (4:140027305 T>G), RS1000013561 (4:139852413 T>A,G), RS1000015368 (4:140071897 G>C), RS1000017332 (4:139983967 A>G), RS1000034610 (4:139808104 TGGAGA>T), RS1000035344 (4:139760724 T>C), RS10000454 (4:140106038 T>A,C), RS10000502 (4:139943603 G>C,T), RS1000050834 (4:139716498 C>T), RS10000616 (4:140011161 T>A,C), RS1000062774 (4:139897052 G>A), RS1000067640 (4:139945318 T>G), RS1000069502 (4:139984368 T>A), RS1000073769 (4:139939923 C>A,T)
Disease associations
OMIM: gene MIM:608991 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
26 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002036_2 | Congenital heart malformation | 5.000000e-12 |
| GCST002613_2 | Chronic mucus hypersecretion | 8.000000e-06 |
| GCST004641_17 | Borderline personality disorder | 6.000000e-06 |
| GCST005316_616 | Intelligence (MTAG) | 6.000000e-09 |
| GCST005316_617 | Intelligence (MTAG) | 1.000000e-09 |
| GCST006665_2 | Social science traits (pleiotropy) (HIPO component 1) | 8.000000e-09 |
| GCST007934_6 | Medication use (anti-inflammatory and antirheumatic products, non-steroids) | 1.000000e-08 |
| GCST008512_11 | Multisite chronic pain | 4.000000e-08 |
| GCST008595_151 | Cognitive ability, years of educational attainment or schizophrenia (pleiotropy) | 5.000000e-14 |
| GCST008832_22 | Gastroesophageal reflux disease | 2.000000e-10 |
| GCST009524_209 | Household income (MTAG) | 7.000000e-09 |
| GCST009524_261 | Household income (MTAG) | 4.000000e-11 |
| GCST009524_283 | Household income (MTAG) | 4.000000e-09 |
| GCST009524_86 | Household income (MTAG) | 2.000000e-08 |
| GCST010725_3 | Malaria | 3.000000e-06 |
| GCST010725_4 | Malaria | 4.000000e-10 |
| GCST010725_58 | Malaria | 9.000000e-07 |
| GCST010725_63 | Malaria | 1.000000e-06 |
| GCST010725_84 | Malaria | 7.000000e-11 |
| GCST010725_89 | Malaria | 7.000000e-11 |
| GCST010988_79 | Adult body size | 1.000000e-12 |
| GCST011122_54 | Walking pace | 6.000000e-11 |
| GCST011358_3 | Academic attainment (English) | 5.000000e-06 |
| GCST011703_67 | Smoking initiation | 1.000000e-09 |
| GCST90000047_94 | Age at first sexual intercourse | 1.000000e-13 |
| GCST90000050_31 | Age at first birth | 3.000000e-12 |
EFO canonical traits (13, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0005673 | chronic mucus hypersecretion |
| EFO:0004337 | intelligence |
| EFO:0007006 | depressive symptom measurement |
| EFO:0007660 | neuroticism measurement |
| EFO:0007869 | wellbeing measurement |
| EFO:0009935 | Non-steroidal anti-inflammatory and antirheumatic product use measurement |
| EFO:0010100 | multisite chronic pain |
| EFO:0004784 | self reported educational attainment |
| EFO:0009695 | household income |
| EFO:0011015 | educational attainment |
| EFO:0005670 | smoking initiation |
| EFO:0009749 | age at first sexual intercourse measurement |
| EFO:0009101 | age at first birth measurement |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
1 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs11100483 | MAML3 | 0.00 | 0 |
CTD chemical–gene interactions
35 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | affects methylation, decreases expression | 2 |
| Nickel | decreases expression | 2 |
| Valproic Acid | affects expression, increases expression | 2 |
| aristolochic acid I | increases expression | 1 |
| bisphenol F | affects cotreatment, increases methylation | 1 |
| methylmercuric chloride | decreases expression | 1 |
| bisphenol A | affects methylation, affects cotreatment | 1 |
| titanium dioxide | decreases methylation | 1 |
| trichostatin A | increases expression | 1 |
| sodium arsenite | affects methylation | 1 |
| benzo(e)pyrene | affects methylation | 1 |
| ferrous chloride | decreases expression | 1 |
| avobenzone | decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| abrine | decreases expression | 1 |
| enzalutamide | affects expression | 1 |
| bisphenol S | decreases methylation | 1 |
| Fulvestrant | affects cotreatment, affects methylation, increases methylation | 1 |
| Acetaminophen | decreases expression | 1 |
| Cisplatin | decreases expression | 1 |
| Doxorubicin | decreases expression | 1 |
| Ethyl Methanesulfonate | increases expression | 1 |
| Formaldehyde | increases expression | 1 |
| Lead | affects methylation | 1 |
| Methapyrilene | affects methylation | 1 |
| Methyl Methanesulfonate | increases expression | 1 |
| Dihydrotestosterone | increases expression | 1 |
| Tobacco Smoke Pollution | decreases expression | 1 |
| 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide | affects expression | 1 |
| Mifepristone | increases expression | 1 |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): congenital heart malformation, gastroesophageal reflux disease