MAP2
gene geneOn this page
Also known as MAP2AMAP2BMAP2C
Summary
MAP2 (microtubule associated protein 2, HGNC:6839) is a protein-coding gene on chromosome 2q34, encoding Microtubule-associated protein 2 (P11137). The exact function of MAP2 is unknown but MAPs may stabilize the microtubules against depolymerization.
This gene encodes a protein that belongs to the microtubule-associated protein family. The proteins of this family are thought to be involved in microtubule assembly, which is an essential step in neurogenesis. The products of similar genes in rat and mouse are neuron-specific cytoskeletal proteins that are enriched in dentrites, implicating a role in determining and stabilizing dentritic shape during neuron development. A number of alternatively spliced variants encoding distinct isoforms have been described.
Source: NCBI Gene 4133 — RefSeq curated summary.
At a glance
- GWAS associations: 18
- Clinical variants (ClinVar): 263 total — 1 pathogenic
- Druggable target: yes
- MANE Select transcript:
NM_001375505
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:6839 |
| Approved symbol | MAP2 |
| Name | microtubule associated protein 2 |
| Location | 2q34 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | MAP2A, MAP2B, MAP2C |
| Ensembl gene | ENSG00000078018 |
| Ensembl biotype | protein_coding |
| OMIM | 157130 |
| Entrez | 4133 |
Gene structure
Transcript identifiers
Ensembl transcripts: 51 — 43 protein_coding, 6 protein_coding_CDS_not_defined, 2 retained_intron
ENST00000199940, ENST00000360351, ENST00000361559, ENST00000392193, ENST00000392194, ENST00000445941, ENST00000447185, ENST00000452717, ENST00000461253, ENST00000464007, ENST00000471619, ENST00000473543, ENST00000475600, ENST00000478233, ENST00000481649, ENST00000482864, ENST00000673860, ENST00000682079, ENST00000704357, ENST00000907243, ENST00000907244, ENST00000907245, ENST00000907246, ENST00000907247, ENST00000907248, ENST00000907249, ENST00000907250, ENST00000907251, ENST00000907252, ENST00000907253, ENST00000907254, ENST00000907255, ENST00000907256, ENST00000907257, ENST00000907258, ENST00000907259, ENST00000907260, ENST00000938182, ENST00000938183, ENST00000938184, ENST00000938185, ENST00000938186, ENST00000958261, ENST00000958262, ENST00000958263, ENST00000958264, ENST00000958265, ENST00000958266, ENST00000958267, ENST00000958268, ENST00000958269
RefSeq mRNA: 58 — MANE Select: NM_001375505
NM_001039538, NM_001363910, NM_001363911, NM_001363913, NM_001375474, NM_001375493, NM_001375494, NM_001375495, NM_001375496, NM_001375497, NM_001375498, NM_001375499, NM_001375500, NM_001375501, NM_001375502, NM_001375503, NM_001375504, NM_001375505, NM_001375506, NM_001375507, NM_001375508, NM_001375509, NM_001375510, NM_001375526, NM_001375527, NM_001375528, NM_001375529, NM_001375530, NM_001375531, NM_001375532, NM_001375533, NM_001375534, NM_001375535, NM_001375536, NM_001375537, NM_001375538, NM_001375539, NM_001375540, NM_001375541, NM_001375542, NM_001375543, NM_001375544, NM_001375545, NM_001375546, NM_001375548, NM_001375551, NM_001375552, NM_001375553, NM_001375554, NM_001375555, NM_001375556, NM_001375557, NM_001375558, NM_001375559, NM_001375583, NM_002374, NM_031845, NM_031847
CCDS: CCDS2384, CCDS2385, CCDS33369, CCDS86916
Canonical transcript exons
ENST00000682079 — 16 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000934702 | 209653142 | 209653432 |
| ENSE00001002769 | 209580036 | 209580100 |
| ENSE00001002771 | 209625053 | 209625129 |
| ENSE00001173452 | 209696917 | 209697051 |
| ENSE00001173465 | 209692625 | 209696350 |
| ENSE00001426753 | 209507592 | 209507641 |
| ENSE00002269717 | 209729850 | 209729962 |
| ENSE00003488583 | 209705580 | 209705727 |
| ENSE00003502144 | 209678572 | 209678685 |
| ENSE00003510474 | 209680750 | 209680827 |
| ENSE00003550656 | 209700277 | 209700338 |
| ENSE00003566567 | 209709914 | 209710254 |
| ENSE00003569157 | 209725709 | 209725790 |
| ENSE00003671028 | 209696542 | 209696748 |
| ENSE00003919847 | 209730182 | 209734112 |
| ENSE00003921376 | 209424047 | 209424276 |
Expression profiles
Bgee: expression breadth ubiquitous, 267 present calls, max score 99.83.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 76.5007 / max 8023.6704, expressed in 1255 samples.
FANTOM5 promoters (41 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 24931 | 31.9138 | 1215 |
| 24944 | 18.9604 | 266 |
| 24937 | 4.9049 | 202 |
| 24945 | 4.7034 | 203 |
| 24955 | 3.0460 | 220 |
| 24939 | 2.4010 | 243 |
| 24943 | 1.6624 | 144 |
| 24930 | 1.2417 | 281 |
| 24956 | 1.2047 | 167 |
| 24947 | 0.8379 | 132 |
Top tissues by expression
292 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| Brodmann (1909) area 23 | UBERON:0013554 | 99.83 | gold quality |
| endothelial cell | CL:0000115 | 99.82 | gold quality |
| superior vestibular nucleus | UBERON:0007227 | 99.81 | gold quality |
| pons | UBERON:0000988 | 99.77 | gold quality |
| substantia nigra pars compacta | UBERON:0001965 | 99.77 | gold quality |
| entorhinal cortex | UBERON:0002728 | 99.77 | gold quality |
| parietal lobe | UBERON:0001872 | 99.75 | gold quality |
| postcentral gyrus | UBERON:0002581 | 99.72 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 99.71 | gold quality |
| substantia nigra pars reticulata | UBERON:0001966 | 99.69 | gold quality |
| lateral nuclear group of thalamus | UBERON:0002736 | 99.61 | gold quality |
| cortical plate | UBERON:0005343 | 99.60 | gold quality |
| lateral globus pallidus | UBERON:0002476 | 99.53 | gold quality |
| ganglionic eminence | UBERON:0004023 | 99.52 | gold quality |
| ventral tegmental area | UBERON:0002691 | 99.47 | gold quality |
| ventricular zone | UBERON:0003053 | 99.22 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 99.08 | gold quality |
| primary visual cortex | UBERON:0002436 | 98.75 | gold quality |
| temporal lobe | UBERON:0001871 | 98.72 | gold quality |
| nucleus accumbens | UBERON:0001882 | 98.54 | gold quality |
| occipital lobe | UBERON:0002021 | 98.48 | gold quality |
| right frontal lobe | UBERON:0002810 | 98.47 | gold quality |
| prefrontal cortex | UBERON:0000451 | 98.09 | gold quality |
| amygdala | UBERON:0001876 | 98.08 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 98.01 | gold quality |
| cingulate cortex | UBERON:0003027 | 97.97 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 97.81 | gold quality |
| neocortex | UBERON:0001950 | 97.60 | gold quality |
| cerebral cortex | UBERON:0000956 | 97.57 | gold quality |
| telencephalon | UBERON:0001893 | 97.55 | gold quality |
Single-cell (SCXA)
Detected in 9 experiment(s), a significant marker in 6.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-56 | yes | 1665.21 |
| E-HCAD-35 | yes | 64.43 |
| E-GEOD-137537 | yes | 15.51 |
| E-HCAD-25 | yes | 9.30 |
| E-GEOD-81547 | yes | 6.98 |
| E-GEOD-93593 | no | 2997.70 |
| E-GEOD-75140 | no | 1970.78 |
| E-MTAB-7303 | no | 853.79 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): CHD8, FOSB, HES1, HOXA1, MECOM, NEUROD1, NR2F1, PAX1, TP53, TXK, ZBTB18
miRNA regulators (miRDB)
292 targeting MAP2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6867-5P | 100.00 | 82.21 | 3464 |
| HSA-MIR-200B-3P | 100.00 | 73.31 | 2693 |
| HSA-MIR-200C-3P | 100.00 | 73.35 | 2685 |
| HSA-MIR-429 | 100.00 | 73.44 | 2698 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-LET-7A-3P | 100.00 | 74.03 | 3932 |
| HSA-LET-7B-3P | 100.00 | 74.08 | 3913 |
| HSA-LET-7F-1-3P | 100.00 | 74.02 | 3928 |
| HSA-MIR-98-3P | 100.00 | 74.08 | 3907 |
| HSA-MIR-4692 | 100.00 | 67.32 | 2066 |
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-4768-5P | 100.00 | 69.49 | 2861 |
| HSA-MIR-126-5P | 100.00 | 72.71 | 3180 |
| HSA-MIR-518D-5P | 100.00 | 67.51 | 979 |
| HSA-MIR-518E-5P | 100.00 | 67.66 | 954 |
| HSA-MIR-518F-5P | 100.00 | 67.51 | 979 |
| HSA-MIR-519A-5P | 100.00 | 67.66 | 954 |
| HSA-MIR-519B-5P | 100.00 | 67.66 | 954 |
| HSA-MIR-519C-5P | 100.00 | 67.66 | 954 |
| HSA-MIR-520C-5P | 100.00 | 67.51 | 979 |
| HSA-MIR-522-5P | 100.00 | 67.66 | 954 |
| HSA-MIR-523-5P | 100.00 | 67.66 | 954 |
| HSA-MIR-526A-5P | 100.00 | 67.51 | 979 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-513A-5P | 100.00 | 69.77 | 2465 |
| HSA-MIR-5692B | 100.00 | 71.32 | 2622 |
Literature-anchored findings (GeneRIF, showing 40)
- MAP2 expression in astrocytomas is due predominantly to low molecular weight isoforms, evident in astrocytes as well as neurons; focal expression of hmw-MAP2 suggests that neuronal antigens may be expressed, particularly in high grade astrocytomas. (PMID:11922706)
- role of small cluster of charged residues in controlling filament morphology (PMID:12023276)
- beta-chains of tubulin and MAP-2 are expressed functionally in SCLC cell lines in association with the development of dendrite-like processes on PC-9 / ECM substrate (PMID:12079519)
- These results provide strong evidence suggesting that MAP2c and tau stabilize microtubules by binding along individual protofilaments, possibly by bridging the tubulin interfaces. (PMID:12082079)
- Immunoreactivity of MAP-2 has been demonstrated in most neuroendocrine and neuroectodermal related neoplasms such as small cell carcinoma, large cell neuroendocrine carcinoma, carcinoid tumor of the lung. (PMID:12605092)
- binding of dehydroepiandrosterone to MAP2C involves specific hydrogen bonds that orient the steroid into the pocket (PMID:12775713)
- The differential distribution of various epitopes suggests that the presence of the Phospho-Ser(262) epitope of tau either accelerates the transition form pre-tangle to tangle, or appears later than the other epitopes in the process of tangle formation. (PMID:12927759)
- over-expression of microtubule-associated protein 2 is associated with oral squamous cell carcinoma (PMID:14604896)
- These data point towards MAP2 as valuable diagnostic tool for pattern recognition and differential diagnosis of low-grade neuroepithelial tumors. (PMID:15146346)
- Decreased spinophilin but unchanged MAP2 expression provides molecular evidence for a hippocampal dendritic pathology in schizophrenia that preferentially affects the spines (PMID:15465982)
- determined that Fyn phosphorylated MAP-2c on tyrosine 67 (PMID:15536091)
- MAP2 is involved in the association of endoplasmic reticulum membranes with microtubules. (PMID:15623521)
- Independent of one another MAP-2c and Fyn are able to induce process outgrowth and in concert can initiate and enhance process outgrowth in an additive manner. (PMID:16145685)
- MAP-2 is expressed in the cytoplasm of non-tumorous adenohypophysial cells as well as of various pituitary adenoma types. (PMID:16195780)
- Tat action on MAP2 stability involved Tat-mediated translocation of the proteasome to the site of microtubule filaments. (PMID:16611822)
- Notch signaling, which is implicated in melanoma progression, and Hairy and Enhancer of Split (HES1) play a role in MAP2 gene regulation during melanoma progression. (PMID:16916793)
- An analysis was made of the weak interactions of ADP-Unc104 and ADP-kinesin with microtubules and their inhibition by MAP2. (PMID:17326138)
- Thus, our findings have not only identified a novel role of MAP2 in non-neuronal cells, but also provided the first implication of MAP2 in malignant oral cancer tissues. (PMID:18073143)
- Data show that the Sudden infant death syndrome group and hypoxic/ischemic group exhibites a general reduction in the number of MAP2 reactive neurons in comparison with the non-hypoxic/ischemic injury group. (PMID:19009302)
- Using shotgun mass spectrometry, we found this protein differentially expressed in the dorsolateral prefrontal cortex from patients with schizophrenia. (PMID:19165527)
- MAP-2 immunoexpression in gliomatosis cerebri (PMID:19309409)
- In contrast with the findings of previous studies, our data indicate that MAP-2 is a moderately positive predictor of the progression of superficial spreading melanomas. (PMID:19369632)
- MAP-2 is a sensitive and specific marker of neuroblastoma, both in the primary tumor and bone marrow biopsy settings. (PMID:19701075)
- Hyperactivation of BRAF-MEK signaling activates MAP2 expression in melanoma cells by two independent mechanisms, promoter demethylation or down-regulation of neuronal transcription repressor HES1. (PMID:19880519)
- The results of this study confirmed previous published data showing a schizophrenia-associated decrease in MAP2 in area 9 with no change in area 17 and no change in Huntington chorea. (PMID:20092829)
- Increased MAP2 expression in malignant melanoma cells significantly inhibits tumor cell growth and neoplasm invasiveness, and induces apoptosis and cell cycle arrest. (PMID:20100193)
- Data indicate that the decline of MAP2 is a common phenomenon in transmissible spongiform encephalopathies (TSEs), which seems to occur at an early stage of incubation period. (PMID:22272295)
- The protein phosphatase PP2A/Balpha binds to the microtubule-associated proteins Tau and MAP2 at a motif also recognized by the kinase Fyn. (PMID:22403409)
- Dysfunction of MAP2/tau family leads to disruption of microtubule structure and impairment of axonal transport, and eventually triggers apoptosis in neurons, which becomes an essential pathway for prion to induce the neuropathology. (PMID:22874672)
- MAP-2 and nestin participate in the regulation of the development of gastric tissues in human embryos. (PMID:22985576)
- Altered MAP2 and tau expression in mesial temporal lobe epilepsy (MTLE) and decreased tau expression in MTLE with psychosis were found. (PMID:24069608)
- MAP2 may play a significant role in neurotoxicity in the Alzheimer’s disease brain despite the absence of MAP2-aggregates. (PMID:24587039)
- Study suggests that many of the morphological changes detected in children’s brainstems regarding distributions of HIF-1alpha and MAP-2 could be due to age differences, but in some regions these distributions are more dependent on the hypoxic conditions (PMID:24780770)
- MAP 2 is a moderately sensitive marker of haemangioblastoma (PMID:24977729)
- SNCG, MAP2, SDF-1 and CXCR4 may play an important role in the carcinogenesis, progression, invasion and metastasis of gastric adenocarcinoma. (PMID:25400739)
- PP2A/striatin complex modulates microtubule dynamics by regulating MAP2 phosphorylation (PMID:25497017)
- MAP2 expression in ovarian teratomas does not appear to have a role in predictive the development of anti-NMDAR encephalitis. (PMID:25569473)
- Prolactin significantly increased the gene expression and protein levels of MAP2 in SK-N-SH neuroblastoma cells, while no significant changes were observed in U-87MG glioblastoma cells. (PMID:25629269)
- MAP2 expression is affected by actomyosin contractility during nanotopography-directed neuronal differentiation of human embryonic stem cells (PMID:25682157)
- Findings demonstrate that microtubule-associated protein 2-immunoreactivity loss is closely linked to dendritic spine pathology in schizophrenia. (PMID:25818630)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Map2 | ENSMUSG00000015222 |
| rattus_norvegicus | Map2 | ENSRNOG00000011841 |
Paralogs (1): MAPT (ENSG00000186868)
Protein
Protein identifiers
Microtubule-associated protein 2 — P11137 (reviewed: P11137)
All UniProt accessions (6): P11137, A0A024R3Z1, A0A669KB77, A8MZ31, E7EV03, H7BZB9
UniProt curated annotations — full annotation on UniProt →
Function. The exact function of MAP2 is unknown but MAPs may stabilize the microtubules against depolymerization. They also seem to have a stiffening effect on microtubules.
Subunit / interactions. Interacts with KNDC1 (via KIND2); the interaction enhances MAP2 phosphorylation and localizes KNDC1 to dendrites. Interacts with DPYSL5.
Subcellular location. Cytoplasm. Cytoskeleton. Cell projection. Dendrite.
Post-translational modifications. Phosphorylated at serine residues in K-X-G-S motifs by MAP/microtubule affinity-regulating kinase (MARK1 or MARK2), causing detachment from microtubules, and their disassembly. Isoform 2 is probably phosphorylated by PKA at Ser-323, Ser-354 and Ser-386 and by FYN at Tyr-67. The interaction with KNDC1 enhances MAP2 threonine phosphorylation.
Isoforms (4)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P11137-1 | 1, MAP2b | yes |
| P11137-2 | 2, MAP2c | |
| P11137-3 | 3 | |
| P11137-4 | 4 |
RefSeq proteins (58): NP_001034627, NP_001350839, NP_001350840, NP_001350842, NP_001362403, NP_001362422, NP_001362423, NP_001362424, NP_001362425, NP_001362426, NP_001362427, NP_001362428, NP_001362429, NP_001362430, NP_001362431, NP_001362432, NP_001362433, NP_001362434, NP_001362435, NP_001362436, NP_001362437, NP_001362438, NP_001362439, NP_001362455, NP_001362456, NP_001362457, NP_001362458, NP_001362459, NP_001362460, NP_001362461, NP_001362462, NP_001362463, NP_001362464, NP_001362465, NP_001362466, NP_001362467, NP_001362468, NP_001362469, NP_001362470, NP_001362471, NP_001362472, NP_001362473, NP_001362474, NP_001362475, NP_001362477, NP_001362480, NP_001362481, NP_001362482, NP_001362483, NP_001362484, NP_001362485, NP_001362486, NP_001362487, NP_001362488, NP_001362512, NP_002365, NP_114033, NP_114035 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001084 | MAP_tubulin-bd_rpt | Repeat |
| IPR013588 | MAP2_projctn | Domain |
| IPR027324 | MAP2/MAP4/Tau | Family |
Pfam: PF00418, PF08377
UniProt features (108 total): modified residue 46, compositionally biased region 23, region of interest 14, sequence conflict 8, sequence variant 8, splice variant 5, repeat 3, chain 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P11137-F1 | 40.46 | 0.00 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (46): 67, 323, 354, 386, 136, 140, 143, 285, 498, 601, 605, 610, 629, 725, 729, 733, 736, 738, 745, 821 …
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 0 (showing top):
GO Biological Process (12): microtubule cytoskeleton organization (GO:0000226), dendrite development (GO:0016358), central nervous system neuron development (GO:0021954), negative regulation of axon extension (GO:0030517), regulation of microtubule polymerization (GO:0031113), negative regulation of microtubule polymerization (GO:0031115), neuron projection development (GO:0031175), regulation of protein localization (GO:0032880), dendrite morphogenesis (GO:0048813), positive regulation of anterograde dense core granule transport (GO:1901953), regulation of organelle transport along microtubule (GO:1902513), positive regulation of anterograde synaptic vesicle transport (GO:1903744)
GO Molecular Function (7): dystroglycan binding (GO:0002162), structural molecule activity (GO:0005198), calmodulin binding (GO:0005516), microtubule binding (GO:0008017), tau protein binding (GO:0048156), protein binding (GO:0005515), tubulin binding (GO:0015631)
GO Cellular Component (24): cytoplasm (GO:0005737), cytosol (GO:0005829), microtubule (GO:0005874), microtubule associated complex (GO:0005875), plasma membrane (GO:0005886), cilium (GO:0005929), dendrite (GO:0030425), dendrite cytoplasm (GO:0032839), neuron projection (GO:0043005), neuronal cell body (GO:0043025), axon initial segment (GO:0043194), dendritic shaft (GO:0043198), axon hillock (GO:0043203), dendritic growth cone (GO:0044294), dendritic branch (GO:0044307), basal dendrite (GO:0097441), primary dendrite (GO:0150001), distal dendrite (GO:0150002), apical distal dendrite (GO:0150014), dendritic filopodium (GO:1902737), proximal dendrite (GO:1990635), proximal neuron projection (GO:1990769), cytoskeleton (GO:0005856), cell projection (GO:0042995)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| dendrite | 7 |
| cellular anatomical structure | 5 |
| neuron development | 2 |
| microtubule polymerization | 2 |
| positive regulation of vesicle transport along microtubule | 2 |
| protein binding | 2 |
| cytoskeletal protein binding | 2 |
| microtubule cytoskeleton | 2 |
| plasma membrane bounded cell projection | 2 |
| neuron projection | 2 |
| cytoskeleton organization | 1 |
| microtubule-based process | 1 |
| neuron projection development | 1 |
| anatomical structure development | 1 |
| central nervous system neuron differentiation | 1 |
| negative regulation of cell growth | 1 |
| regulation of axon extension | 1 |
| negative regulation of developmental growth | 1 |
| axon extension | 1 |
| negative regulation of axonogenesis | 1 |
| regulation of microtubule polymerization or depolymerization | 1 |
| regulation of protein polymerization | 1 |
| regulation of supramolecular fiber organization | 1 |
| negative regulation of microtubule polymerization or depolymerization | 1 |
| regulation of microtubule polymerization | 1 |
| negative regulation of protein polymerization | 1 |
| negative regulation of supramolecular fiber organization | 1 |
| plasma membrane bounded cell projection organization | 1 |
| intracellular protein localization | 1 |
| regulation of localization | 1 |
| dendrite development | 1 |
| cell morphogenesis involved in neuron differentiation | 1 |
| neuron projection morphogenesis | 1 |
| regulation of anterograde dense core granule transport | 1 |
| positive regulation of dense core granule transport | 1 |
| anterograde neuronal dense core vesicle transport | 1 |
| regulation of intracellular transport | 1 |
| regulation of microtubule-based movement | 1 |
| organelle transport along microtubule | 1 |
| anterograde synaptic vesicle transport | 1 |
Protein interactions and networks
STRING
2820 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| MAP2 | SYP | P08247 | 861 |
| MAP2 | DLG4 | P78352 | 803 |
| MAP2 | NES | P48681 | 801 |
| MAP2 | GFAP | P14136 | 794 |
| MAP2 | RBFOX3 | A6NFN3 | 789 |
| MAP2 | MBP | P02686 | 774 |
| MAP2 | GAP43 | P17677 | 771 |
| MAP2 | NEFL | P07196 | 747 |
| MAP2 | CHAT | P28329 | 730 |
| MAP2 | SYN1 | P17600 | 729 |
| MAP2 | DCX | O43602 | 729 |
| MAP2 | TUBB3 | Q13509 | 713 |
| MAP2 | BDNF | P23560 | 712 |
| MAP2 | ENO2 | P09104 | 683 |
| MAP2 | VDAC1 | P21796 | 671 |
IntAct
57 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| NFE2L2 | MAFG | psi-mi:“MI:0914”(association) | 0.940 |
| MED21 | MED19 | psi-mi:“MI:0914”(association) | 0.880 |
| PRKAR1A | psi-mi:“MI:0914”(association) | 0.700 | |
| MAP2 | GRB2 | psi-mi:“MI:0407”(direct interaction) | 0.670 |
| MAP2 | GRB2 | psi-mi:“MI:0915”(physical association) | 0.670 |
| GRB2 | MAP2 | psi-mi:“MI:0407”(direct interaction) | 0.670 |
| GRB2 | MAP2 | psi-mi:“MI:0914”(association) | 0.670 |
| GRB2 | MAP2 | psi-mi:“MI:2364”(proximity) | 0.670 |
| YWHAG | BLTP3B | psi-mi:“MI:2364”(proximity) | 0.640 |
| YWHAH | BLTP3B | psi-mi:“MI:2364”(proximity) | 0.570 |
| SYNGAP1 | IGF2BP3 | psi-mi:“MI:0914”(association) | 0.530 |
| NUFIP1 | PDE2A | psi-mi:“MI:0914”(association) | 0.530 |
| PRKAR2B | AMY1A | psi-mi:“MI:0914”(association) | 0.530 |
| ITCH | MAP2 | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| MAP2 | CalpB | psi-mi:“MI:0194”(cleavage reaction) | 0.440 |
| MAP2 | HSD17B12 | psi-mi:“MI:0915”(physical association) | 0.400 |
| CCP110 | MAP2 | psi-mi:“MI:0915”(physical association) | 0.370 |
| MAPT | MEX3A | psi-mi:“MI:0914”(association) | 0.350 |
| Prdm16 | ESYT2 | psi-mi:“MI:0914”(association) | 0.350 |
| MAPT | SHTN1 | psi-mi:“MI:0914”(association) | 0.350 |
| CEP135 | WDR91 | psi-mi:“MI:0914”(association) | 0.350 |
| GPM6A | KIF2A | psi-mi:“MI:0914”(association) | 0.350 |
| HAX1 | DNM1L | psi-mi:“MI:0914”(association) | 0.350 |
| DGUOK | BIN1 | psi-mi:“MI:0914”(association) | 0.350 |
| ARMC1 | DCX | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (116): MAP2 (Affinity Capture-MS), MAP2 (Affinity Capture-MS), MAP2 (Affinity Capture-MS), MAP2 (Affinity Capture-MS), MAP2 (Affinity Capture-MS), MAP2 (Affinity Capture-MS), MAP2 (Proximity Label-MS), MAP2 (Biochemical Activity), MAP2 (Affinity Capture-MS), MAP2 (Affinity Capture-MS), MAP2 (Affinity Capture-MS), MAP2 (Affinity Capture-MS), MAP2 (Affinity Capture-MS), MAP2 (Affinity Capture-RNA), MAP2 (Biochemical Activity)
ESM2 similar proteins: A2ARZ3, A4FU69, A4IH95, A5WUN7, A6H5Y1, A7MC64, D3Z8E6, E9Q309, O75969, O95197, P11137, P15146, P20357, P86839, Q01613, Q0P5X5, Q16799, Q2M2Z5, Q2T9M9, Q498L0, Q52KN3, Q53TS8, Q5IS59, Q5MY90, Q5RHB5, Q5SW79, Q5T5Y3, Q5VT06, Q62394, Q64548, Q6A065, Q6DFV7, Q6RJR6, Q6ZQ06, Q6ZVD7, Q76I76, Q7TS75, Q8BYM7, Q8BZJ8, Q8C5W0
Diamond homologs: O02828, P10636, P10637, P11137, P15146, P19332, P20357, P27546, P27816, P29172, P36225, P57786, Q5M7W5, Q5S6V2, Q5YCV9, Q5YCW0, Q5YCW1, Q6TS35, Q9MYX8
SIGNOR signaling
15 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| PRKACA | “down-regulates activity” | MAP2 | phosphorylation |
| DPYSL5 | “down-regulates activity” | MAP2 | binding |
| MAP2 | “up-regulates quantity by stabilization” | Microtubule_polimerization | binding |
| KNDC1 | “up-regulates activity” | MAP2 | phosphorylation |
| PRKACA | up-regulates | MAP2 | phosphorylation |
| CHD8 | “down-regulates quantity” | MAP2 | “transcriptional regulation” |
| MARK1 | “down-regulates activity” | MAP2 | phosphorylation |
| estramustine | “down-regulates activity” | MAP2 | “chemical inhibition” |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 58 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Activation of BAD and translocation to mitochondria | 6 | 99.3× | 4e-09 |
| Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex | 6 | 87.6× | 4e-09 |
| SARS-CoV-1 targets host intracellular signalling and regulatory pathways | 6 | 87.6× | 4e-09 |
| Activation of BH3-only proteins | 6 | 64.8× | 2e-08 |
| RHO GTPases activate PKNs | 6 | 41.4× | 3e-07 |
| Intrinsic Pathway for Apoptosis | 6 | 38.2× | 3e-07 |
| FOXO-mediated transcription | 5 | 36.5× | 5e-06 |
| FCGR3A-mediated IL10 synthesis | 5 | 31.8× | 9e-06 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| intracellular protein localization | 7 | 13.8× | 2e-04 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
263 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 1 |
| Likely pathogenic | 0 |
| Uncertain significance | 205 |
| Likely benign | 23 |
| Benign | 12 |
Top pathogenic / likely-pathogenic (1)
| Variant ID | HGVS | Classification |
|---|---|---|
| 150477 | GRCh38/hg38 2q33.3-34(chr2:207058886-211245603)x1 | Pathogenic |
SpliceAI
0 predictions. Top by Δscore:
AlphaMissense
0 scored. Top likely-pathogenic:
dbSNP variants (sampled 300 via entrez): RS1000005188 (2:209576215 T>C), RS1000012948 (2:209475038 G>A,C), RS1000018228 (2:209510151 A>G), RS1000019962 (2:209722489 A>G), RS1000023771 (2:209446419 C>A,G,T), RS1000026924 (2:209484710 A>C), RS1000029839 (2:209675632 T>G), RS1000048194 (2:209553498 A>G), RS1000050069 (2:209621622 A>G), RS1000059755 (2:209469725 C>T), RS1000072304 (2:209596029 A>C), RS1000081284 (2:209666354 T>C), RS1000084891 (2:209568460 G>A), RS1000105674 (2:209527500 T>A), RS1000160289 (2:209704357 G>C,T)
Disease associations
OMIM: gene MIM:157130 | disease phenotypes: MIM:312750
GenCC curated gene-disease
Mondo (1): Rett syndrome (MONDO:0010726)
Orphanet (2): Atypical Rett syndrome (Orphanet:3095), Rett syndrome (Orphanet:778)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
18 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST007324_101 | Adventurousness | 9.000000e-09 |
| GCST007325_109 | General risk tolerance (MTAG) | 3.000000e-10 |
| GCST007592_1 | Handedness (Left-handed vs. non-left-handed) | 4.000000e-08 |
| GCST008103_179 | Bipolar disorder | 8.000000e-06 |
| GCST008158_128 | Body mass index | 8.000000e-06 |
| GCST008163_239 | Height | 6.000000e-07 |
| GCST008818_3 | Handedness (Left-handed vs. non-left-handed) | 5.000000e-08 |
| GCST008819_1 | Handedness (left-handed vs. right-handed) | 3.000000e-08 |
| GCST010698_62 | Subcortical volume (min-P) | 2.000000e-09 |
| GCST010699_39 | Brain morphology (min-P) | 1.000000e-08 |
| GCST010700_2 | Cortical thickness (MOSTest) | 9.000000e-21 |
| GCST010701_46 | Cortical surface area (MOSTest) | 3.000000e-19 |
| GCST010702_16 | Subcortical volume (MOSTest) | 5.000000e-08 |
| GCST010703_138 | Brain morphology (MOSTest) | 4.000000e-08 |
| GCST011741_70 | LDL cholesterol levels in HIV infection | 1.000000e-05 |
| GCST90010427_6 | Left–right brain asymmetry | 1.000000e-10 |
| GCST90013411_1 | Skin and soft tissue infections | 2.000000e-06 |
| GCST90013421_25 | Left-handedness | 2.000000e-30 |
EFO canonical traits (7, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0008579 | risk-taking behaviour |
| EFO:0009902 | handedness |
| EFO:0004340 | body mass index |
| EFO:0004346 | neuroimaging measurement |
| EFO:0004840 | cortical thickness |
| EFO:0004611 | low density lipoprotein cholesterol measurement |
| EFO:1001489 | skin and soft tissue Staphylococcus aureus infection |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D015518 | Rett Syndrome | C10.597.606.360.455.937; C16.320.322.500.937; C16.320.400.525.937 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL2390810 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
31 potent at pChembl≥5 of 39 total, top 31 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 8.70 | IC50 | 1.995 | nM | CHEMBL4746468 |
| 8.50 | IC50 | 3.162 | nM | CHEMBL4762949 |
| 8.30 | IC50 | 5.012 | nM | CHEMBL4796852 |
| 8.20 | IC50 | 6.31 | nM | CHEMBL4743507 |
| 7.60 | IC50 | 25.12 | nM | CHEMBL4800438 |
| 7.60 | IC50 | 25.12 | nM | CHEMBL4791887 |
| 7.30 | IC50 | 50.12 | nM | CHEMBL4756420 |
| 7.20 | IC50 | 63.1 | nM | CHEMBL4751717 |
| 7.00 | IC50 | 100 | nM | CHEMBL4777059 |
| 7.00 | IC50 | 100 | nM | CHEMBL4760584 |
| 6.90 | IC50 | 125.9 | nM | CHEMBL4789033 |
| 6.60 | IC50 | 251.2 | nM | CHEMBL4752469 |
| 6.60 | IC50 | 251.2 | nM | CHEMBL4747815 |
| 6.50 | IC50 | 316.2 | nM | CHEMBL4744483 |
| 6.50 | IC50 | 316.2 | nM | CHEMBL4752192 |
| 6.40 | IC50 | 398.1 | nM | CHEMBL4791945 |
| 6.40 | IC50 | 398.1 | nM | CHEMBL4748280 |
| 6.30 | IC50 | 501.2 | nM | CHEMBL4739940 |
| 6.20 | IC50 | 631 | nM | CHEMBL4788981 |
| 6.20 | IC50 | 631 | nM | CHEMBL4763098 |
| 6.00 | IC50 | 1000 | nM | CHEMBL4791336 |
| 5.90 | IC50 | 1259 | nM | CHEMBL4764145 |
| 5.80 | IC50 | 1585 | nM | CHEMBL4751163 |
| 5.60 | IC50 | 2512 | nM | CHEMBL4754200 |
| 5.52 | IC50 | 3000 | nM | CHEMBL3586452 |
| 5.40 | IC50 | 4000 | nM | CHEMBL3586455 |
| 5.40 | IC50 | 3981 | nM | CHEMBL4747043 |
| 5.30 | IC50 | 5000 | nM | CHEMBL3586457 |
| 5.20 | IC50 | 6310 | nM | CHEMBL4740679 |
| 5.10 | IC50 | 8000 | nM | CHEMBL3586456 |
| 5.10 | IC50 | 7943 | nM | CHEMBL4792430 |
PubChem BioAssay actives
31 with measured affinity, of 50 total; 31 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 5,6-difluoro-3-(4-piperazin-1-yl-2-propan-2-yloxyphenyl)-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.0020 | uM |
| 5-chloro-6-fluoro-3-(4-piperazin-1-yl-2-propan-2-yloxyphenyl)-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.0032 | uM |
| 5-chloro-6-fluoro-3-(2-propan-2-yloxyphenyl)-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.0050 | uM |
| 5-chloro-6-fluoro-3-(2-methoxyphenyl)-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.0063 | uM |
| 5-chloro-3-[4-(4-methylpiperazin-1-yl)phenyl]-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.0251 | uM |
| 5-chloro-3-(2-propan-2-yloxyphenyl)-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.0251 | uM |
| 5-chloro-3-(4-morpholin-4-ylphenyl)-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.0501 | uM |
| 5-chloro-6-fluoro-3-phenyl-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.0631 | uM |
| 5-chloro-3-(2-methoxyphenyl)-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.1000 | uM |
| 5-chloro-3-[4-(dimethylamino)phenyl]-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.1000 | uM |
| 5-chloro-3-(4-methoxyphenyl)-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.1259 | uM |
| 5-chloro-3-[4-(1H-pyrazol-5-yl)phenyl]-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.2512 | uM |
| 5-chloro-3-[4-(pyrrolidine-1-carbonyl)phenyl]-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.2512 | uM |
| 5-chloro-3-(2-methylphenyl)-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.3162 | uM |
| 5-chloro-3-phenyl-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.3162 | uM |
| 5-chloro-3-(4-chlorophenyl)-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.3981 | uM |
| 5-chloro-3-[2-(trifluoromethoxy)phenyl]-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.3981 | uM |
| 5-chloro-3-(4-cyanophenyl)-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.5012 | uM |
| 5-chloro-7-fluoro-3-phenyl-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.6310 | uM |
| 5-fluoro-3-phenyl-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 0.6310 | uM |
| 5-chloro-3-[4-[(dimethylamino)methyl]phenyl]-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 1.0000 | uM |
| 5-chloro-3-phenyl-1H-pyrrolo[2,3-b]pyridine-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 1.2589 | uM |
| 1-(5-chloro-3-phenyl-1H-indol-2-yl)ethanone | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 1.5849 | uM |
| 3-phenyl-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 2.5119 | uM |
| 7-(2-methylphenyl)-5-(2,2,2-trifluoroethyl)-1H-pyrazolo[4,5-c][1,5]naphthyridin-4-one | 1230704: Inhibition of human METAP2 using Met-Pro-Arg-pNa substrate by para-nitroanilide chromophore release detection assay | ic50 | 3.0000 | uM |
| 5-chloro-4-fluoro-3-phenyl-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 3.9811 | uM |
| N-methyl-2-[4-oxo-5-(2,2,2-trifluoroethyl)-1H-pyrazolo[4,5-c][1,5]naphthyridin-7-yl]benzenesulfonamide | 1230704: Inhibition of human METAP2 using Met-Pro-Arg-pNa substrate by para-nitroanilide chromophore release detection assay | ic50 | 4.0000 | uM |
| 7-[6-(4-methylpiperazin-1-yl)-3-pyridinyl]-5-(2,2,2-trifluoroethyl)-1H-pyrazolo[4,5-c][1,5]naphthyridin-4-one | 1230704: Inhibition of human METAP2 using Met-Pro-Arg-pNa substrate by para-nitroanilide chromophore release detection assay | ic50 | 5.0000 | uM |
| 3-phenyl-1H-pyrrolo[2,3-c]pyridine-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 6.3096 | uM |
| 7-chloro-3-phenyl-1H-indole-2-carboxamide | 1676454: Inhibition of MetAP2 (unknown origin) | ic50 | 7.9433 | uM |
| N-[2-[4-oxo-5-(2,2,2-trifluoroethyl)-1H-pyrazolo[4,5-c][1,5]naphthyridin-7-yl]phenyl]methanesulfonamide | 1230704: Inhibition of human METAP2 using Met-Pro-Arg-pNa substrate by para-nitroanilide chromophore release detection assay | ic50 | 8.0000 | uM |
CTD chemical–gene interactions
108 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects expression, affects cotreatment, increases expression, increases reaction, decreases expression | 10 |
| Tretinoin | increases reaction, affects cotreatment, decreases expression, affects expression, affects reaction (+1 more) | 9 |
| sodium arsenite | decreases expression, increases abundance, increases expression | 6 |
| bisphenol A | decreases expression, increases methylation | 5 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression, increases reaction, decreases reaction | 4 |
| (+)-JQ1 compound | decreases expression, increases expression | 4 |
| LDN 193189 | affects cotreatment, increases expression, increases reaction, decreases reaction | 3 |
| Arsenic | increases expression, affects methylation, decreases expression, increases abundance | 3 |
| methylmercuric chloride | decreases expression, increases expression | 2 |
| trichostatin A | affects expression, increases expression | 2 |
| monomethylarsonous acid | increases expression | 2 |
| Alitretinoin | decreases expression, increases expression | 2 |
| Panobinostat | affects cotreatment, increases expression | 2 |
| Doxorubicin | decreases expression, increases expression | 2 |
| Phenylmercuric Acetate | increases expression, affects cotreatment | 2 |
| Progesterone | decreases expression, increases expression | 2 |
| Rotenone | decreases reaction, increases expression, decreases expression, affects cotreatment | 2 |
| Aflatoxin B1 | decreases methylation, decreases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| 6,7-dimethoxy-2-(pyrrolidin-1-yl)-N-(5-(pyrrolidin-1-yl)pentyl)quinazolin-4-amine | increases expression | 1 |
| FR900359 | affects phosphorylation | 1 |
| aminomethylphosphonic acid (AMPA) | decreases expression | 1 |
| THJ-018 | affects expression | 1 |
| lead acetate | increases expression, decreases reaction | 1 |
| 2,4,5,2’,4’,5’-hexachlorobiphenyl | increases expression | 1 |
| sulforaphane | increases expression | 1 |
| bis(2,3,3,3-tetrachloropropyl) ether | increases expression, affects cotreatment | 1 |
| butyraldehyde | decreases expression | 1 |
| 16 alpha-ethyl-21-hydroxy-19-nor-4-pregnene-3,20-dione | increases expression | 1 |
| nickel chloride | increases expression, increases reaction | 1 |
ChEMBL screening assays
3 unique, capped per target: 3 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL3586886 | Binding | Inhibition of human METAP2 using Met-Pro-Arg-pNa substrate by para-nitroanilide chromophore release detection assay | Pyridinonaphthyridinone Inhibitors of Type 2 Methionine Aminopeptidase. — ACS Med Chem Lett |
Cellosaurus cell lines
3 cell lines: 3 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_D1TI | Abcam U-87MG MAP2 KO | Cancer cell line | Male |
| CVCL_SW35 | HAP1 MAP2 (-) 1 | Cancer cell line | Male |
| CVCL_SW36 | HAP1 MAP2 (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
88 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00069550 | PHASE3 | UNKNOWN | Independent Studies of Dextromethorphan and of Donepezil Hydrochloride for Rett Syndrome |
| NCT00261508 | PHASE3 | COMPLETED | A Study of the Effectiveness and Safety of Risperidone Versus Placebo in the Treatment of Children With Autistic Disorder and Other Pervasive Developmental Disorders (PDD) |
| NCT03848832 | PHASE3 | TERMINATED | Efficacy and Safety of Cannabidiol Oral Solution (GWP42003-P, CBD-OS) in Patients With Rett Syndrome |
| NCT03941444 | PHASE3 | COMPLETED | ANAVEX2-73 Study in Patients With Rett Syndrome |
| NCT04181723 | PHASE3 | COMPLETED | Study of Trofinetide for the Treatment of Girls and Women With Rett Syndrome (LAVENDER™) |
| NCT04252586 | PHASE3 | TERMINATED | A Long-term Safety Study of Cannabidiol Oral Solution (GWP42003-P, CBD-OS) in Patients With Rett Syndrome |
| NCT04279314 | PHASE3 | COMPLETED | Open-Label Extension Study of Trofinetide for the Treatment of Girls and Women With Rett Syndrome |
| NCT04776746 | PHASE3 | TERMINATED | Open-Label Extension Study of Trofinetide for Rett Syndrome |
| NCT05606614 | PHASE3 | RECRUITING | A Phase 1/2/3 Study of TSHA-102 Gene Therapy in Females With Rett Syndrome (REVEAL Pivotal Study) |
| NCT05898620 | PHASE3 | RECRUITING | A Novel, Regulated Gene Therapy (NGN-401) Study for Females With Rett Syndrome |
| NCT06840496 | PHASE3 | RECRUITING | To Investigate the Efficacy of Treatment With Oral NA-921 (Bionetide) Versus Placebo in Females With Rett Syndrome |
| NCT07480564 | PHASE3 | RECRUITING | Safety and Preliminary Efficacy of TSHA-102 Gene Therapy in Pediatric Females Aged >2 to <4 Years With Rett Syndrome |
| NCT07503444 | PHASE3 | NOT_YET_RECRUITING | A Phase 3 Study of Fenfluramine Hydrochloride in Rett Syndrome |
| NCT00593957 | PHASE2 | TERMINATED | Trial of Dextromethorphan in Rett Syndrome |
| NCT00990691 | PHASE2 | COMPLETED | Pilot Study of the Effects of the Desipramine on the Neurovegetative Parameters of the Child With Rett Syndrome |
| NCT01520363 | PHASE2 | COMPLETED | Placebo Controlled Trial of Dextromethorphan in Rett Syndrome |
| NCT01703533 | PHASE2 | COMPLETED | A Safety Study of NNZ-2566 in Patients With Rett Syndrome |
| NCT01777542 | PHASE2 | COMPLETED | Treatment of Rett Syndrome With Recombinant Human IGF-1 |
| NCT01822249 | PHASE2 | COMPLETED | Phase 2 Study of EPI-743 for Treatment of Rett Syndrome |
| NCT02153723 | PHASE2 | COMPLETED | Pharmacological Treatment of Rett Syndrome With Glatiramer Acetate (Copaxone) |
| NCT02563860 | PHASE2 | COMPLETED | Pharmacological Treatment of Rett Syndrome With Statins |
| NCT02696044 | PHASE2 | UNKNOWN | Treatment of Mitochondrial Dysfunction in Rett Syndrome With Triheptanoin |
| NCT02715115 | PHASE2 | COMPLETED | A Safety Study of NNZ-2566 in Pediatric Rett Syndrome |
| NCT03059160 | PHASE2 | UNKNOWN | Open Label Trial of Triheptanoin (UX007) in Treatment of Rett Syndrome. |
| NCT03633058 | PHASE2 | COMPLETED | A Study to Evaluate Ketamine for the Treatment of Rett Syndrome |
| NCT03758924 | PHASE2 | COMPLETED | Study of ANAVEX2-73 in Patients With Rett Syndrome |
| NCT04041713 | PHASE2 | NOT_YET_RECRUITING | A Pilot Study of an Antioxidant Cocktail vs. Placebo in the Treatment of Children and Adolescents With Rett Syndrome |
| NCT05625568 | PHASE2 | UNKNOWN | Study of VYNT-0126 in the Treatment of Rett Syndrome in Adult Patients |
| NCT01253317 | PHASE1 | COMPLETED | Treatment of Rett Syndrome With rhIGF-1 (Mecasermin [rDNA]Injection) |
| NCT02023424 | PHASE1 | UNKNOWN | An Open Label, Exploratory Study to Investigate the Treatment Effect of Glatiramer Acetate on Girls Woth Rett Syndrome |
| NCT02562820 | PHASE1 | TERMINATED | An Exploratory Trial of Ketamine for the Treatment of Rett Syndrome |
| NCT07150013 | PHASE1 | RECRUITING | Rett REVOLUTION Trial: An Exploratory Evaluation of the Safety and Efficacy of Vorinostat in Rett Syndrome |
| NCT02790034 | PHASE2/PHASE3 | TERMINATED | Evaluation of the Efficacy, Safety, and Tolerability of Sarizotan in Rett Syndrome With Respiratory Symptoms |
| NCT04304482 | PHASE2/PHASE3 | COMPLETED | ANAVEX2-73 Study in Pediatric Patients With Rett Syndrome |
| NCT04988867 | PHASE2/PHASE3 | TERMINATED | An Open-Label Study of Trofinetide for the Treatment of Girls Two to Five Years of Age Who Have Rett Syndrome |
| NCT06849973 | PHASE2/PHASE3 | COMPLETED | To Study the Efficacy & Safety of Oral NA-921 (Bionetide) in Girls and Women with Rett Syndrome |
| NCT07257978 | PHASE2/PHASE3 | NOT_YET_RECRUITING | Efficacy and Safety of NTI164 in Children and Young Adults With Rett Syndrome |
| NCT06152237 | PHASE1/PHASE2 | ACTIVE_NOT_RECRUITING | Safety and Efficacy of TSHA-102 in Pediatric Females With Rett Syndrome (REVEAL Pediatric Study) |
| NCT06621043 | PHASE1/PHASE2 | ACTIVE_NOT_RECRUITING | Assessing the Safety and Efficacy of Full-Spectrum Medicinal Cannabis Plant Extract 0.08% THC (NTI164) in the Treatment of Rett Syndrome (RTT) |
| NCT06199700 | EARLY_PHASE1 | COMPLETED | Esketamine for the Treatment of Rett Syndrome |
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): Rett syndrome