MAP3K1
geneOn this page
Also known as MEKKMAPKKK1
Summary
MAP3K1 (mitogen-activated protein kinase kinase kinase 1, HGNC:6848) is a protein-coding gene on chromosome 5q11.2, encoding Mitogen-activated protein kinase kinase kinase 1 (Q13233). Component of a protein kinase signal transduction cascade.
The protein encoded by this gene is a serine/threonine kinase and is part of some signal transduction cascades, including the ERK and JNK kinase pathways as well as the NF-kappa-B pathway. The encoded protein is activated by autophosphorylation and requires magnesium as a cofactor in phosphorylating other proteins. This protein has E3 ligase activity conferred by a plant homeodomain (PHD) in its N-terminus and phospho-kinase activity conferred by a kinase domain in its C-terminus.
Source: NCBI Gene 4214 — RefSeq curated summary.
At a glance
- Gene–disease (curated): 46,XY sex reversal 6 (Definitive, GenCC) — +3 more curated relationships
- GWAS associations: 92
- Clinical variants (ClinVar): 338 total — 10 pathogenic, 7 likely-pathogenic
- Phenotypes (HPO): 52
- Druggable target: yes — 31 molecules with ChEMBL bioactivity
- Cancer driver (intOGen): loss-of-function (tumor-suppressor-like) across 10 cancer types
- Dosage sensitivity (ClinGen): haploinsufficiency no evidence, triplosensitivity no evidence
- MANE Select transcript:
NM_005921
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:6848 |
| Approved symbol | MAP3K1 |
| Name | mitogen-activated protein kinase kinase kinase 1 |
| Location | 5q11.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | MEKK, MAPKKK1 |
| Ensembl gene | ENSG00000095015 |
| Ensembl biotype | protein_coding |
| OMIM | 600982 |
| Entrez | 4214 |
Gene structure
Transcript identifiers
Ensembl transcripts: 5 — 4 protein_coding, 1 retained_intron
ENST00000399503, ENST00000469188, ENST00000872824, ENST00000872825, ENST00000948659
RefSeq mRNA: 1 — MANE Select: NM_005921
NM_005921
CCDS: CCDS43318
Canonical transcript exons
ENST00000399503 — 20 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000745951 | 56859715 | 56859915 |
| ENSE00000745995 | 56864734 | 56864934 |
| ENSE00000746124 | 56871910 | 56872031 |
| ENSE00000746182 | 56872641 | 56872722 |
| ENSE00000746259 | 56872825 | 56873005 |
| ENSE00000746337 | 56875032 | 56875310 |
| ENSE00000746373 | 56878980 | 56879101 |
| ENSE00000746405 | 56880711 | 56880802 |
| ENSE00000746427 | 56881083 | 56881272 |
| ENSE00000746594 | 56883527 | 56883679 |
| ENSE00000746613 | 56884664 | 56884826 |
| ENSE00000746632 | 56885932 | 56886063 |
| ENSE00000746658 | 56887378 | 56887520 |
| ENSE00000746681 | 56888226 | 56888357 |
| ENSE00000815243 | 56865340 | 56865456 |
| ENSE00001085022 | 56856600 | 56856750 |
| ENSE00001179087 | 56865829 | 56865977 |
| ENSE00001538733 | 56881570 | 56882866 |
| ENSE00001538799 | 56815549 | 56816055 |
| ENSE00003569597 | 56893531 | 56896152 |
Expression profiles
Bgee: expression breadth ubiquitous, 264 present calls, max score 97.84.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 11.1259 / max 271.6326, expressed in 1543 samples.
FANTOM5 promoters (6 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 56505 | 9.3451 | 1519 |
| 56506 | 0.6237 | 239 |
| 56504 | 0.3713 | 205 |
| 56503 | 0.3423 | 142 |
| 56507 | 0.2629 | 121 |
| 56502 | 0.1805 | 81 |
Top tissues by expression
290 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| buccal mucosa cell | CL:0002336 | 97.84 | gold quality |
| upper leg skin | UBERON:0004262 | 97.53 | gold quality |
| skin of hip | UBERON:0001554 | 97.48 | gold quality |
| parotid gland | UBERON:0001831 | 97.36 | gold quality |
| corpus epididymis | UBERON:0004359 | 95.50 | gold quality |
| monocyte | CL:0000576 | 95.30 | gold quality |
| mononuclear cell | CL:0000842 | 95.13 | gold quality |
| leukocyte | CL:0000738 | 94.98 | gold quality |
| mammalian vulva | UBERON:0000997 | 94.58 | gold quality |
| oral cavity | UBERON:0000167 | 94.48 | gold quality |
| esophagus squamous epithelium | UBERON:0006920 | 94.24 | gold quality |
| mammary duct | UBERON:0001765 | 94.05 | gold quality |
| gingiva | UBERON:0001828 | 93.79 | gold quality |
| trabecular bone tissue | UBERON:0002483 | 93.60 | gold quality |
| nipple | UBERON:0002030 | 93.52 | gold quality |
| pigmented layer of retina | UBERON:0001782 | 93.43 | gold quality |
| palpebral conjunctiva | UBERON:0001812 | 93.36 | gold quality |
| gingival epithelium | UBERON:0001949 | 93.17 | gold quality |
| epithelium of nasopharynx | UBERON:0001951 | 93.04 | gold quality |
| germinal epithelium of ovary | UBERON:0001304 | 92.97 | gold quality |
| renal medulla | UBERON:0000362 | 92.53 | gold quality |
| penis | UBERON:0000989 | 92.39 | gold quality |
| caput epididymis | UBERON:0004358 | 92.39 | gold quality |
| endothelial cell | CL:0000115 | 91.81 | gold quality |
| blood | UBERON:0000178 | 91.11 | gold quality |
| seminal vesicle | UBERON:0000998 | 91.06 | gold quality |
| parietal pleura | UBERON:0002400 | 90.84 | gold quality |
| tonsil | UBERON:0002372 | 90.80 | gold quality |
| bone marrow | UBERON:0002371 | 90.62 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 90.36 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 10.89 |
| E-MTAB-6075 | no | 1328.29 |
| E-ENAD-17 | no | 571.34 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): ATF2, EGR1, JUN, MYC, SP1, SP3, TP53
miRNA regulators (miRDB)
262 targeting MAP3K1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-200B-3P | 100.00 | 73.31 | 2693 |
| HSA-MIR-200C-3P | 100.00 | 73.35 | 2685 |
| HSA-MIR-429 | 100.00 | 73.44 | 2698 |
| HSA-MIR-9-5P | 100.00 | 72.28 | 2361 |
| HSA-MIR-196A-5P | 100.00 | 68.16 | 684 |
| HSA-MIR-196B-5P | 100.00 | 68.16 | 681 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-8485 | 100.00 | 77.57 | 4731 |
| HSA-MIR-3646 | 100.00 | 73.56 | 5283 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-4668-3P | 100.00 | 68.74 | 2635 |
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-4500 | 99.99 | 72.72 | 2367 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-33A-5P | 99.99 | 68.62 | 1055 |
| HSA-MIR-33B-5P | 99.99 | 68.58 | 1062 |
| HSA-MIR-6077 | 99.99 | 68.04 | 2299 |
| HSA-LET-7A-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7B-5P | 99.98 | 72.31 | 1790 |
| HSA-LET-7C-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7E-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7F-5P | 99.98 | 72.56 | 1784 |
| HSA-LET-7G-5P | 99.98 | 72.37 | 1784 |
Functional genomics
ClinGen dosage: haploinsufficiency 0 (no evidence), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map
Literature-anchored findings (GeneRIF, showing 40)
- Modulation of human cytomegalovirus immediate early gene enhancer and promoter activity by MEKK1 is under the control of the NFkappaB/rel sites. (PMID:11746500)
- MEK kinase 1 induces mitochondrial permeability transition leading to apoptosis (PMID:11756439)
- caspase cleavage of MEKK1 is a dynamic regulatory mechanism that alters the subcellular distribution of MEKK1, changing its function to pro-apoptotic signaling (PMID:11782455)
- Opposing roles of serine/threonine kinases MEKK1 and LOK in regulating the CD28 responsive element in T-cells (PMID:11903060)
- Results suggest that the conserved AR acetylation site contributes to a pathway governing prostate cancer cellular survival, as AR acetylation mutants are defective in MEKK1-induced apoptosis. (PMID:11971970)
- Results show that oncogenic ras provokes premature senescence by sequentially activating the MEK-ERK and MKK3/6-p38 pathways in normal, primary cells. (PMID:11971971)
- the NOx-induced cell proliferation via activation of MEKK1 might contribute to lung tissue damage caused by NOx (PMID:12079429)
- The difference of suppression in pancreatic cancer cells and non-pancreatic cancer cells suggested that the MEKK1 pathway mainly contributes to cell survival in pancreatic cancer cells (PMID:12185592)
- mechanism by which the MEKK1-dependent JNK/SAPK pathway is negatively regulated by PAK through phosphorylation of serine 67 (PMID:12228228)
- Ubiquitylation of MEKK1 inhibits its phosphorylation of MKK1 and MKK4 and activation of the ERK1/2 and JNK pathways (PMID:12456688)
- MEKK1 is activated by GSK3beta (PMID:12584189)
- conclude that Ras regulates TNF-alpha-induced chemokine expression by activating the AP-1 pathway and enhancing transcriptional function of NF-kappaB, whereas MEKK1 activates both the AP-1 and NF-kappaB pathways (PMID:12600818)
- Axin utilizes distinct regions for competitive MEKK1 and MEKK4 binding and JNK activation. (PMID:12878610)
- subdomain VIII of MEKK1 is involved not only in binding to, but also in discrimination of, protein substrates (PMID:14500727)
- coexpression of constitutive-active MEKK1 inhibited orphan receptor TR3 transcriptional activity and TR3-induced proliferation in lung cancer cells (PMID:14612408)
- The G(i)-Ras-MEKK1 signaling pathway mediates lysophosphatidic acid-stimulated ovarian cancer cell migration by facilitating focal adhesion kinase redistribution to focal contacts. (PMID:15205333)
- glutathione s-transferaase Mu suppresses MEKK1-mediated apoptosis and functions as a negative regulator of MEKK1. (PMID:15299005)
- MEKK1 plays a key role in Bcr-Abl-induced STAT3 activation and in ES cells’ capacity for LIF-independent self-renewal and may thus be involved in Bcr-Abl-mediated leukemogenesis in stem cells (PMID:16044153)
- Galpha13-induced VASP phosphorylation that involves activation of RhoA and MEKK1, phosphorylation and degradation of IkappaB, release of PKA catalytic subunit from the complex with IkappaB and NF-kappaB, and subsequent phosphorylation of VASP (PMID:16046415)
- Induction of Nur77 nuclear export by MEKK1 required a prolonged MEKK1 activation and was attenuated by Akt activation. Expression of constitutively active Akt prevented MEKK1-induced Nur77 nuclear export. (PMID:16434970)
- Pge2 abolished the MEKK1-induced MMP-1 promoter luciferase activity. (PMID:16714289)
- MEKK1 transmits wound signals, leading to the transcriptional activation of genes involved in Extracellular Matrix homeostasis, epithelial cell migration, and wound reepithelialization. (PMID:16760432)
- Caspase-3 and the p38alpha MAP kinase were activated during TIMP-1-induced UT-7 cells erythroid differentiation. (PMID:17301822)
- The results suggest that multiple cellular signaling pathways can reactivate the virus in a genetically homogeneous cell population. Further analysis revealed that the Raf/MEK/ERK/Ets-1 pathway mediates Ras-induced reactivation. (PMID:17397260)
- A pathway comprising PKCs>Raf-1>MEK-1>ERK-1/-2 mediates the effect of gastrin on the CgA promoter, and strongly suggests that enhanced phosphorylation of Sp1 and CREB is crucial for CgA transactivation through the G protein-coupled CCK-B/gastrin receptor. (PMID:17889508)
- Heterozygote carriers and minor allele homozygote carriers for SNP rs889312 in the MAP3K1 gene were less likely to be lymph node positive at breast cancer diagnosis (P = 0.044) relative to major allele homozygote carriers. (PMID:17997823)
- reduction of upstream MEKK1 signals uncovers analogous but differential roles of JNK1 and JNK2 in a biological process (PMID:18032450)
- MEK functions to enhance GCN2-dependent eIF2alpha phosphorylation rather than suppressing dephosphorylation (PMID:18287093)
- Signaling pathways that augment or diminish beta-cell MEKK-1 activity may aid in the generation of novel therapeutic strategies in the treatment of type 1 diabetes. (PMID:18308848)
- The differences in the effects of the FGFR2 and MAP3K1 SNPs between BRCA1 and BRCA2 carriers point to differences in the biology of BRCA1 and BRCA2 breast cancer tumors and confirm the distinct nature of breast cancer in BRCA1 mutation carriers. (PMID:18355772)
- MEKK-1 mediates cytokine-induced JNK- and NF-kappaB activation, and this event is necessary for iNOS expression and cell death in pancreatic islet cells. (PMID:18420486)
- MAP3K1 protects against acute lung injury induced by nickel. (PMID:18467339)
- The activation of TORC1 through MEKK1-mediated phosphorylation, is reported. (PMID:18784253)
- IPS-1 requires TRAF6 and MEKK1 to activate NF-kappaB and mitogen-activated protein kinases that are critical for the optimal induction of type I interferons (PMID:18984593)
- FGFR2 and MAP3K1 are involved in breast cancer susceptibility and confer their effects primarily in ER+ and PR+ tumors. (PMID:19028704)
- Loss of MADD expression resulted in reduced Grb2 and Sos1/2 recruitment to the TNFR1 complex and decreased Ras and MEKK1/2 activation (PMID:19289468)
- MEKK1 may be a potential target for development of anti-invasion and metastasis drugs. (PMID:19513748)
- These results of MAP3K1, previously reported as an Axin1 inter-actor in c-Jun NH(2)-terminal kinase pathway, is also involved in the canonical Wnt signalling pathway and positively regulates expression of Wnt target genes. (PMID:20128690)
- MAP3K1 rs889312 polymorphism is associated with increased risk of breast cancer in BRCA1 mutation carriers (PMID:20809358)
- MAP/ERK kinase kinase 1 (MEKK1) mediates transcriptional repression by interacting with polycystic kidney disease-1 (PKD1) promoter-bound p53 tumor suppressor protein (PMID:20923779)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | map3k1 | ENSDARG00000098405 |
| mus_musculus | Map3k1 | ENSMUSG00000021754 |
| rattus_norvegicus | Map3k1 | ENSRNOG00000013177 |
Paralogs (35): MAP3K14 (ENSG00000006062), MAP4K3 (ENSG00000011566), MAP4K5 (ENSG00000012983), MAP2K3 (ENSG00000034152), SLK (ENSG00000065613), MAP4K4 (ENSG00000071054), STK10 (ENSG00000072786), PAK3 (ENSG00000077264), STRADB (ENSG00000082146), STK4 (ENSG00000101109), PAK5 (ENSG00000101349), STK24 (ENSG00000102572), STK3 (ENSG00000104375), MAP4K1 (ENSG00000104814), MAP3K8 (ENSG00000107968), MAP2K6 (ENSG00000108984), NEK4 (ENSG00000114904), STK25 (ENSG00000115694), NRK (ENSG00000123572), PAK4 (ENSG00000130669), STK26 (ENSG00000134602), TAOK3 (ENSG00000135090), PAK6 (ENSG00000137843), MINK1 (ENSG00000141503), PAK1 (ENSG00000149269), TAOK2 (ENSG00000149930), TNIK (ENSG00000154310), TAOK1 (ENSG00000160551), MAP4K2 (ENSG00000168067), OXSR1 (ENSG00000172939), MAP3K19 (ENSG00000176601), PAK2 (ENSG00000180370), SBK2 (ENSG00000187550), STK39 (ENSG00000198648), STRADA (ENSG00000266173)
Protein
Protein identifiers
Mitogen-activated protein kinase kinase kinase 1 — Q13233 (reviewed: Q13233)
Alternative names: MAPK/ERK kinase kinase 1
All UniProt accessions (1): Q13233
UniProt curated annotations — full annotation on UniProt →
Function. Component of a protein kinase signal transduction cascade. Activates the ERK and JNK kinase pathways by phosphorylation of MAP2K1 and MAP2K4. May phosphorylate the MAPK8/JNK1 kinase. Activates CHUK and IKBKB, the central protein kinases of the NF-kappa-B pathway.
Subunit / interactions. Binds both upstream activators and downstream substrates in multimolecular complexes through its N-terminus. Oligomerizes after binding MAP2K4 or TRAF2. Interacts with AXIN1. Interacts (via the kinase catalytic domain) with STK38. Interacts with GRIPAP1.
Post-translational modifications. Autophosphorylated.
Disease relevance. 46,XY sex reversal 6 (SRXY6) [MIM:613762] A disorder of sex development. Affected individuals have a 46,XY karyotype but present as phenotypically normal females. The disease is caused by variants affecting the gene represented in this entry.
Activity regulation. Activated by autophosphorylation on Thr-1400 and Thr-1412 following oligomerization.
Similarity. Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.
RefSeq proteins (1): NP_005912* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000719 | Prot_kinase_dom | Domain |
| IPR001841 | Znf_RING | Domain |
| IPR007527 | Znf_SWIM | Domain |
| IPR008271 | Ser/Thr_kinase_AS | Active_site |
| IPR011009 | Kinase-like_dom_sf | Homologous_superfamily |
| IPR011989 | ARM-like | Homologous_superfamily |
| IPR013083 | Znf_RING/FYVE/PHD | Homologous_superfamily |
| IPR016024 | ARM-type_fold | Homologous_superfamily |
| IPR017441 | Protein_kinase_ATP_BS | Binding_site |
| IPR050538 | MAP_kinase_kinase_kinase | Family |
Pfam: PF00069, PF04434, PF21040
Enzyme classification (BRENDA):
- EC 2.7.11.25 — mitogen-activated protein kinase kinase kinase (BRENDA: 30 organisms, 191 substrates, 74 inhibitors, 12 Km, 12 kcat entries)
Substrate kinetics (BRENDA)
2 substrates with measured Km, best-characterized 2. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| MEK | 0.0002–0.0004 | 6 |
| ATP | 0.02–0.394 | 5 |
Catalyzed reactions (Rhea), 2 shown:
- L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+) (RHEA:17989)
- L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+) (RHEA:46608)
UniProt features (86 total): helix 18, modified residue 17, compositionally biased region 12, sequence conflict 11, region of interest 8, sequence variant 8, turn 4, binding site 2, zinc finger region 2, initiator methionine 1, chain 1, domain 1, active site 1
Structure
Experimental structures (PDB)
1 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 6WHB | X-RAY DIFFRACTION | 1.9 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q13233-F1 | 59.80 | 0.18 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 1369 (proton acceptor)
Ligand- & substrate-binding residues (2): 1249–1257; 1272
Post-translational modifications (17): 2, 21, 35, 137, 154, 275, 285, 292, 297, 300, 507, 531, 923, 1018, 1043, 1400, 1412
Function
Pathways and Gene Ontology
Reactome pathways
19 pathways
| ID | Pathway |
|---|---|
| R-HSA-166058 | MyD88:MAL(TIRAP) cascade initiated on plasma membrane |
| R-HSA-2871796 | FCERI mediated MAPK activation |
| R-HSA-933542 | TRAF6 mediated NF-kB activation |
| R-HSA-975138 | TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation |
| R-HSA-975871 | MyD88 cascade initiated on plasma membrane |
| R-HSA-166016 | Toll Like Receptor 4 (TLR4) Cascade |
| R-HSA-168138 | Toll Like Receptor 9 (TLR9) Cascade |
| R-HSA-168142 | Toll Like Receptor 10 (TLR10) Cascade |
| R-HSA-168176 | Toll Like Receptor 5 (TLR5) Cascade |
| R-HSA-168179 | Toll Like Receptor TLR1:TLR2 Cascade |
| R-HSA-168181 | Toll Like Receptor 7/8 (TLR7/8) Cascade |
| R-HSA-168188 | Toll Like Receptor TLR6:TLR2 Cascade |
| R-HSA-168249 | Innate Immune System |
| R-HSA-168256 | Immune System |
| R-HSA-168898 | Toll-like Receptor Cascades |
| R-HSA-168928 | DDX58/IFIH1-mediated induction of interferon-alpha/beta |
| R-HSA-181438 | Toll Like Receptor 2 (TLR2) Cascade |
| R-HSA-2454202 | Fc epsilon receptor (FCERI) signaling |
| R-HSA-975155 | MyD88 dependent cascade initiated on endosome |
MSigDB gene sets: 520 (showing top):
PID_BCR_5PATHWAY, REACTOME_DDX58_IFIH1_MEDIATED_INDUCTION_OF_INTERFERON_ALPHA_BETA, BIOCARTA_TNFR2_PATHWAY, BIOCARTA_FMLP_PATHWAY, REACTOME_INNATE_IMMUNE_SYSTEM, BIOCARTA_MAL_PATHWAY, GOBP_CELLULAR_RESPONSE_TO_EXTERNAL_STIMULUS, KEGG_MAPK_SIGNALING_PATHWAY, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, GAUSSMANN_MLL_AF4_FUSION_TARGETS_C_UP, PID_NFAT_3PATHWAY, MORF_RAD51L3, BIOCARTA_IL1R_PATHWAY, KOKKINAKIS_METHIONINE_DEPRIVATION_96HR_UP, GOBP_REGULATION_OF_IMMUNE_RESPONSE
GO Biological Process (5): protein phosphorylation (GO:0006468), Fc-epsilon receptor signaling pathway (GO:0038095), cellular response to mechanical stimulus (GO:0071260), MAPK cascade (GO:0000165), cell surface receptor signaling pathway (GO:0007166)
GO Molecular Function (13): protein kinase activity (GO:0004672), protein serine/threonine kinase activity (GO:0004674), MAP kinase kinase kinase activity (GO:0004709), ATP binding (GO:0005524), zinc ion binding (GO:0008270), protein kinase binding (GO:0019901), ubiquitin protein ligase activity (GO:0061630), protein serine kinase activity (GO:0106310), nucleotide binding (GO:0000166), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740), metal ion binding (GO:0046872)
GO Cellular Component (3): cytoplasm (GO:0005737), cytosol (GO:0005829), tight junction (GO:0070160)
Reactome top-level categories
Rollup of top-14 pathways:
| Category | Pathways |
|---|---|
| Toll-like Receptor Cascades | 6 |
| Innate Immune System | 3 |
| Toll Like Receptor 2 (TLR2) Cascade | 2 |
| Toll Like Receptor 4 (TLR4) Cascade | 1 |
| Toll Like Receptor TLR1:TLR2 Cascade | 1 |
| Toll Like Receptor TLR6:TLR2 Cascade | 1 |
| Fc epsilon receptor (FCERI) signaling | 1 |
| DDX58/IFIH1-mediated induction of interferon-alpha/beta | 1 |
| MyD88 dependent cascade initiated on endosome | 1 |
| Toll Like Receptor 10 (TLR10) Cascade | 1 |
| Toll Like Receptor 5 (TLR5) Cascade | 1 |
| Immune System | 1 |
| Toll Like Receptor 9 (TLR9) Cascade | 1 |
| Toll Like Receptor 7/8 (TLR7/8) Cascade | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| protein kinase activity | 2 |
| cellular anatomical structure | 2 |
| phosphorylation | 1 |
| protein modification process | 1 |
| Fc receptor signaling pathway | 1 |
| response to mechanical stimulus | 1 |
| cellular response to abiotic stimulus | 1 |
| cellular response to external stimulus | 1 |
| intracellular signaling cassette | 1 |
| signal transduction | 1 |
| kinase activity | 1 |
| phosphotransferase activity, alcohol group as acceptor | 1 |
| catalytic activity, acting on a protein | 1 |
| MAPK cascade | 1 |
| protein serine/threonine kinase activity | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| transition metal ion binding | 1 |
| kinase binding | 1 |
| ubiquitin-protein transferase activity | 1 |
| ubiquitin-like protein ligase activity | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| binding | 1 |
| transferase activity, transferring phosphorus-containing groups | 1 |
| catalytic activity | 1 |
| cation binding | 1 |
| intracellular anatomical structure | 1 |
| cytoplasm | 1 |
| cell-cell junction | 1 |
Protein interactions and networks
STRING
4000 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| MAP3K1 | BIRC2 | Q13490 | 839 |
| MAP3K1 | TOX3 | O15405 | 833 |
| MAP3K1 | BRCA1 | P38398 | 771 |
| MAP3K1 | LSP1 | P33241 | 760 |
| MAP3K1 | TRAF3 | Q13114 | 747 |
| MAP3K1 | JUN | P05412 | 746 |
| MAP3K1 | TNFRSF1A | P19438 | 738 |
| MAP3K1 | UBE2N | P61088 | 737 |
| MAP3K1 | TAB1 | Q15750 | 734 |
| MAP3K1 | TP53 | P04637 | 727 |
| MAP3K1 | AXIN1 | O15169 | 720 |
| MAP3K1 | DCAF7 | P61962 | 716 |
| MAP3K1 | IKBKG | Q9Y6K9 | 709 |
| MAP3K1 | BIRC3 | Q13489 | 695 |
| MAP3K1 | PTEN | P60484 | 676 |
IntAct
167 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| AXIN1 | APC | psi-mi:“MI:0914”(association) | 0.850 |
| MAP3K1 | DCAF7 | psi-mi:“MI:0915”(physical association) | 0.710 |
| MAP3K1 | DCAF7 | psi-mi:“MI:0914”(association) | 0.710 |
| MAP3K1 | DCAF7 | psi-mi:“MI:0407”(direct interaction) | 0.710 |
| DCAF7 | MAP3K1 | psi-mi:“MI:0403”(colocalization) | 0.710 |
| YWHAE | MAP3K1 | psi-mi:“MI:0915”(physical association) | 0.710 |
| MAP3K1 | YWHAE | psi-mi:“MI:0403”(colocalization) | 0.710 |
| MAP3K1 | BRAF | psi-mi:“MI:0217”(phosphorylation reaction) | 0.610 |
| MAP3K1 | BRAF | psi-mi:“MI:0915”(physical association) | 0.610 |
| MAP2K4 | MAP3K1 | psi-mi:“MI:0915”(physical association) | 0.600 |
| MAP3K1 | MAP2K4 | psi-mi:“MI:0217”(phosphorylation reaction) | 0.600 |
| MAP3K1 | MAP2K4 | psi-mi:“MI:0915”(physical association) | 0.600 |
| MAP3K1 | TRAF2 | psi-mi:“MI:2364”(proximity) | 0.540 |
| MAP3K1 | HSPA1L | psi-mi:“MI:2364”(proximity) | 0.540 |
| MAP3K1 | TRAF2 | psi-mi:“MI:0915”(physical association) | 0.540 |
| YWHAZ | BLTP3B | psi-mi:“MI:0914”(association) | 0.530 |
| MAGEB2 | POLRMT | psi-mi:“MI:0914”(association) | 0.530 |
| FLNB | RAC1 | psi-mi:“MI:0914”(association) | 0.500 |
| FLNB | MAP3K1 | psi-mi:“MI:0915”(physical association) | 0.500 |
| MAP3K1 | psi-mi:“MI:0915”(physical association) | 0.500 | |
| MAP3K1 | ARRB2 | psi-mi:“MI:2364”(proximity) | 0.480 |
| MAP3K1 | ESR1 | psi-mi:“MI:0217”(phosphorylation reaction) | 0.440 |
| MAP3K1 | IKBKB | psi-mi:“MI:0217”(phosphorylation reaction) | 0.440 |
| MAP3K1 | HNRNPK | psi-mi:“MI:0915”(physical association) | 0.400 |
| MAP3K1 | MAP4K2 | psi-mi:“MI:0915”(physical association) | 0.400 |
| MAP4K2 | MAP3K1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| MAP3K1 | MAP2K7 | psi-mi:“MI:0915”(physical association) | 0.400 |
| MAP3K1 | MAP2K1 | psi-mi:“MI:0915”(physical association) | 0.400 |
BioGRID (247): RHOA (Affinity Capture-Western), FRAT1 (Affinity Capture-Western), MAPK1 (Biochemical Activity), MAPK3 (Biochemical Activity), AXIN1 (Affinity Capture-Luminescence), FRAT1 (Affinity Capture-Luminescence), BAP1 (Biochemical Activity), FKBP6 (Biochemical Activity), NPLOC4 (Biochemical Activity), ASCC2 (Biochemical Activity), UBE2V1 (Biochemical Activity), UBAC1 (Biochemical Activity), DNAJB6 (Biochemical Activity), TOM1L2 (Biochemical Activity), CUEDC1 (Biochemical Activity)
ESM2 similar proteins: A0A8I3NFE2, A0FI79, A1A5B6, A4D2P6, D7PF45, F1LXF1, O15357, O60346, O75808, P11274, P49796, P52734, P53349, P59672, P70268, P78524, P98174, Q0QWG9, Q13233, Q13905, Q16825, Q3MII6, Q50H33, Q5RDA9, Q62925, Q63433, Q6NS60, Q6P549, Q6PDJ6, Q6WVG3, Q7Z5H3, Q8BL80, Q8BUP8, Q8N2R8, Q8TF61, Q8VHK2, Q8WXD9, Q924W7, Q92625, Q96CX2
Diamond homologs: A0A078CGE6, A0A194W8T8, A2AQW0, A2QHV0, A4K2M3, A4K2P5, A4K2Q5, A4K2S1, A4K2T0, A4K2W5, A4K2Y1, A7A1P0, A8XJW8, A9RVK2, A9SY39, B0XXN8, B5VNQ3, E9Q3S4, F4HRJ4, G4N7X0, G4NDR3, O08648, O14047, O14299, O22040, O22042, O35099, O54748, O61122, O74304, O81472, O95382, P23561, P25390, P28829, P41892, P53349, P53599, Q01389, Q03497
SIGNOR signaling
35 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| RIPK1 | “up-regulates activity” | MAP3K1 | phosphorylation |
| RIPK1 | up-regulates | MAP3K1 | phosphorylation |
| MAP3K1 | “down-regulates activity” | FADD | phosphorylation |
| TRAF2 | up-regulates | MAP3K1 | binding |
| MAP3K1 | up-regulates | CRTC1 | phosphorylation |
| PAK1 | “up-regulates activity” | MAP3K1 | phosphorylation |
| MAP3K1 | “up-regulates activity” | STAT3 | phosphorylation |
| MAP3K1 | “up-regulates activity” | MAP2K4 | phosphorylation |
| GRIPAP1 | “up-regulates activity” | MAP3K1 | binding |
| Ub:E2 | “up-regulates activity” | MAP3K1 | ubiquitination |
| MAP3K1 | “down-regulates quantity by destabilization” | ERK1/2 | polyubiquitination |
| MAP3K1 | “up-regulates activity” | MAP2K7 | phosphorylation |
| hsa-miR-23b-3p | “down-regulates quantity by repression” | MAP3K1 | “post transcriptional regulation” |
| MAP3K1 | “up-regulates activity” | SMAD2 | phosphorylation |
| MAP3K1 | “up-regulates activity” | IKBKB | phosphorylation |
| MAP3K1 | “down-regulates activity” | NOTCH1 | phosphorylation |
| ABL1 | “up-regulates activity” | MAP3K1 | phosphorylation |
| KRAS | up-regulates | MAP3K1 | binding |
| MAP4K1 | up-regulates | MAP3K1 | phosphorylation |
| MAP4K4 | up-regulates | MAP3K1 | phosphorylation |
| MAP3K1 | up-regulates | MAP2K7 | phosphorylation |
| MAP4K5 | up-regulates | MAP3K1 | |
| MAP3K1 | up-regulates | MAP2K6 | phosphorylation |
| MAP4K2 | up-regulates | MAP3K1 | binding |
| MAP4K3 | up-regulates | MAP3K1 | phosphorylation |
| SMAD7 | down-regulates | MAP3K1 |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 148 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Formation of tubulin folding intermediates by CCT/TriC | 12 | 39.4× | 2e-15 |
| Cooperation of Prefoldin and TriC/CCT in actin and tubulin folding | 12 | 37.9× | 4e-15 |
| Prefoldin mediated transfer of substrate to CCT/TriC | 12 | 36.6× | 6e-15 |
| RHO GTPases activate IQGAPs | 11 | 29.5× | 1e-12 |
| Gap junction trafficking and regulation | 8 | 29.5× | 3e-09 |
| Gap junction trafficking | 8 | 29.5× | 3e-09 |
| Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane | 7 | 29.5× | 3e-08 |
| Transport of connexons to the plasma membrane | 7 | 29.5× | 3e-08 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| positive regulation of telomere maintenance via telomerase | 8 | 41.9× | 2e-09 |
| cytoplasmic translation | 24 | 31.8× | 8e-27 |
| protein refolding | 7 | 31.2× | 3e-07 |
| Fc-epsilon receptor signaling pathway | 5 | 26.2× | 1e-04 |
| translation | 25 | 18.4× | 6e-22 |
| binding of sperm to zona pellucida | 6 | 18.1× | 1e-04 |
| ribosomal small subunit biogenesis | 11 | 17.9× | 5e-09 |
| ribosomal large subunit biogenesis | 5 | 15.8× | 9e-04 |
Disease & clinical
Cancer significance
From intOGen — cancer-driver classification: loss-of-function (tumor-suppressor-like) across 10 cancer types — BRCA, CCRCC, CEAD, COAD, COADREAD, GBM, HCC, PCM, UCEC, WDTC.
Clinical variants and AI predictions
ClinVar
338 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 10 |
| Likely pathogenic | 7 |
| Uncertain significance | 155 |
| Likely benign | 61 |
| Benign | 51 |
Top pathogenic / likely-pathogenic (17)
| Variant ID | HGVS | Classification |
|---|---|---|
| 2745804 | NM_005921.2(MAP3K1):c.1348A>G (p.Met450Val) | Pathogenic |
| 30144 | NM_005921.2(MAP3K1):c.634-8T>A | Pathogenic |
| 30146 | NM_005921.2(MAP3K1):c.566T>C (p.Leu189Pro) | Pathogenic |
| 30147 | NM_005921.2(MAP3K1):c.566T>G (p.Leu189Arg) | Pathogenic |
| 430732 | NM_005921.2(MAP3K1):c.1760T>A (p.Leu587His) | Pathogenic |
| 471688 | NM_005921.2(MAP3K1):c.1016G>A (p.Arg339Gln) | Pathogenic |
| 634713 | NM_005921.2(MAP3K1):c.2627_2642del (p.Thr876fs) | Pathogenic |
| 634716 | NM_005921.2(MAP3K1):c.4369_4373del (p.His1457fs) | Pathogenic |
| 634720 | NM_005921.2(MAP3K1):c.2111C>G (p.Ser704Ter) | Pathogenic |
| 634799 | NM_005921.2(MAP3K1):c.1408del (p.His470fs) | Pathogenic |
| 2507001 | NM_005921.2(MAP3K1):c.3964T>G (p.Phe1322Val) | Likely pathogenic |
| 268092 | NM_005921.2(MAP3K1):c.1923G>A (p.Met641Ile) | Likely pathogenic |
| 4281633 | NM_005921.2(MAP3K1):c.565C>G (p.Leu189Val) | Likely pathogenic |
| 430731 | NM_005921.2(MAP3K1):c.566T>A (p.Leu189Gln) | Likely pathogenic |
| 4538420 | NM_005921.2(MAP3K1):c.2370-1G>C | Likely pathogenic |
| 634727 | NM_005921.2(MAP3K1):c.2512_2523del (p.Leu838_Leu841del) | Likely pathogenic |
| 988563 | NM_005921.2(MAP3K1):c.2273T>C (p.Leu758Pro) | Likely pathogenic |
SpliceAI
2851 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 5:56856586:T:A | acceptor_gain | 1.0000 |
| 5:56856590:T:A | acceptor_gain | 1.0000 |
| 5:56856593:A:AG | acceptor_gain | 1.0000 |
| 5:56856594:T:G | acceptor_gain | 1.0000 |
| 5:56856597:TA:T | acceptor_loss | 1.0000 |
| 5:56856598:A:AG | acceptor_gain | 1.0000 |
| 5:56856598:AGTC:A | acceptor_gain | 1.0000 |
| 5:56856599:G:GG | acceptor_gain | 1.0000 |
| 5:56856599:GT:G | acceptor_gain | 1.0000 |
| 5:56856599:GTC:G | acceptor_gain | 1.0000 |
| 5:56856599:GTCG:G | acceptor_gain | 1.0000 |
| 5:56856599:GTCGT:G | acceptor_gain | 1.0000 |
| 5:56856708:G:GT | donor_gain | 1.0000 |
| 5:56856721:TTGGA:T | donor_gain | 1.0000 |
| 5:56856747:TGTGG:T | donor_loss | 1.0000 |
| 5:56856748:GTG:G | donor_gain | 1.0000 |
| 5:56856748:GTGGT:G | donor_loss | 1.0000 |
| 5:56856749:TGGTA:T | donor_loss | 1.0000 |
| 5:56856750:GGTA:G | donor_loss | 1.0000 |
| 5:56856751:G:C | donor_loss | 1.0000 |
| 5:56856751:G:GG | donor_gain | 1.0000 |
| 5:56856752:TAAGT:T | donor_loss | 1.0000 |
| 5:56859883:GGA:G | donor_gain | 1.0000 |
| 5:56859884:GAG:G | donor_gain | 1.0000 |
| 5:56859886:G:GG | donor_gain | 1.0000 |
| 5:56871906:A:AG | acceptor_gain | 1.0000 |
| 5:56871907:T:G | acceptor_gain | 1.0000 |
| 5:56871908:A:AG | acceptor_gain | 1.0000 |
| 5:56871908:A:G | acceptor_loss | 1.0000 |
| 5:56871909:G:GA | acceptor_gain | 1.0000 |
AlphaMissense
9845 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 5:56871935:T:A | C443S | 1.000 |
| 5:56871935:T:C | C443R | 1.000 |
| 5:56871936:G:A | C443Y | 1.000 |
| 5:56871936:G:C | C443S | 1.000 |
| 5:56871937:T:G | C443W | 1.000 |
| 5:56871944:T:C | C446R | 1.000 |
| 5:56871945:G:A | C446Y | 1.000 |
| 5:56871946:C:G | C446W | 1.000 |
| 5:56871983:T:A | C459S | 1.000 |
| 5:56871983:T:C | C459R | 1.000 |
| 5:56871984:G:A | C459Y | 1.000 |
| 5:56871984:G:C | C459S | 1.000 |
| 5:56871985:T:G | C459W | 1.000 |
| 5:56871995:T:A | C463S | 1.000 |
| 5:56871995:T:C | C463R | 1.000 |
| 5:56871996:G:C | C463S | 1.000 |
| 5:56871997:C:G | C463W | 1.000 |
| 5:56872008:T:C | L467P | 1.000 |
| 5:56872010:C:G | H468D | 1.000 |
| 5:56872019:T:C | C471R | 1.000 |
| 5:56872020:G:A | C471Y | 1.000 |
| 5:56872021:C:G | C471W | 1.000 |
| 5:56872031:T:A | W475R | 1.000 |
| 5:56872031:T:C | W475R | 1.000 |
| 5:56872642:G:C | W475C | 1.000 |
| 5:56872642:G:T | W475C | 1.000 |
| 5:56872679:T:A | C488S | 1.000 |
| 5:56872679:T:C | C488R | 1.000 |
| 5:56872679:T:G | C488G | 1.000 |
| 5:56872680:G:A | C488Y | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000042047 (5:56824790 C>G), RS1000097153 (5:56818757 A>G), RS1000114612 (5:56835268 A>G), RS1000201153 (5:56886938 T>G), RS1000205012 (5:56882700 A>G), RS1000257277 (5:56882986 C>A,G,T), RS1000259925 (5:56852892 TATAC>T,TATACATAC), RS1000277936 (5:56830358 C>A), RS1000285625 (5:56894375 A>C,T), RS1000413312 (5:56889508 C>A), RS1000427637 (5:56846448 A>G,T), RS1000435664 (5:56888693 C>T), RS1000520625 (5:56824430 A>T), RS1000541608 (5:56863218 C>T), RS1000551858 (5:56824279 G>T)
Disease associations
OMIM: gene MIM:600982 | disease phenotypes: MIM:613762
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| 46,XY sex reversal 6 | Definitive | Autosomal dominant |
| breast cancer | Moderate | Autosomal dominant |
| 46,XY complete gonadal dysgenesis | Supportive | Autosomal dominant |
| 46,XY partial gonadal dysgenesis | Supportive | Autosomal dominant |
Mondo (7): 46,XY sex reversal 6 (MONDO:0013410), hereditary neoplastic syndrome (MONDO:0015356), hearing loss disorder (MONDO:0005365), ovarian neoplasm (MONDO:0021068), 46,XY complete gonadal dysgenesis (MONDO:0010765), 46,XY partial gonadal dysgenesis (MONDO:0016674), breast cancer (MONDO:0007254)
Orphanet (2): Microphthalmia-anophthalmia-coloboma (Orphanet:98555), Inherited cancer-predisposing syndrome (Orphanet:140162)
HPO phenotypes
52 total (30 of 52 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000027 | Azoospermia |
| HP:0000028 | Cryptorchidism |
| HP:0000030 | Testicular gonadoblastoma |
| HP:0000037 | Male pseudohermaphroditism |
| HP:0000041 | Chordee |
| HP:0000044 | Hypogonadotropic hypogonadism |
| HP:0000045 | Abnormal scrotum morphology |
| HP:0000047 | Hypospadias |
| HP:0000054 | Micropenis |
| HP:0000058 | Abnormal labia morphology |
| HP:0000062 | Ambiguous genitalia |
| HP:0000100 | Nephrotic syndrome |
| HP:0000133 | Gonadal dysgenesis |
| HP:0000142 | Abnormal vagina morphology |
| HP:0000147 | Polycystic ovaries |
| HP:0000149 | Ovarian gonadoblastoma |
| HP:0000150 | Gonadoblastoma |
| HP:0000771 | Gynecomastia |
| HP:0000786 | Primary amenorrhea |
| HP:0000812 | Abnormal internal genitalia |
| HP:0000815 | Hypergonadotropic hypogonadism |
| HP:0000823 | Delayed puberty |
| HP:0000837 | Increased circulating gonadotropin level |
| HP:0000846 | Adrenal insufficiency |
| HP:0000868 | Decreased fertility in females |
| HP:0000939 | Osteoporosis |
| HP:0001007 | Hirsutism |
| HP:0002215 | Sparse axillary hair |
| HP:0002225 | Sparse pubic hair |
GWAS associations
92 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000035_5 | Breast cancer | 7.000000e-20 |
| GCST000365_1 | Breast cancer | 5.000000e-07 |
| GCST000678_1 | Breast cancer | 5.000000e-09 |
| GCST000758_30 | Triglycerides | 1.000000e-10 |
| GCST001759_2 | Type 2 diabetes | 4.000000e-06 |
| GCST001937_2 | Breast cancer | 3.000000e-36 |
| GCST002063_5 | Sexual dimorphism in anthropometric traits | 8.000000e-07 |
| GCST002137_1 | Waist circumference | 1.000000e-07 |
| GCST002216_35 | Triglycerides | 3.000000e-16 |
| GCST002248_13 | Fasting insulin (dietary factor interaction) | 9.000000e-07 |
| GCST002253_2 | Homeostasis model assessment of insulin resistance (dietary factor interaction) | 1.000000e-06 |
| GCST002346_1 | Breast cancer (early onset) | 9.000000e-14 |
| GCST002346_10 | Breast cancer (early onset) | 2.000000e-09 |
| GCST002346_11 | Breast cancer (early onset) | 1.000000e-08 |
| GCST002346_14 | Breast cancer (early onset) | 1.000000e-14 |
| GCST002346_2 | Breast cancer (early onset) | 2.000000e-12 |
| GCST002346_3 | Breast cancer (early onset) | 4.000000e-12 |
| GCST002346_4 | Breast cancer (early onset) | 5.000000e-12 |
| GCST002346_5 | Breast cancer (early onset) | 5.000000e-12 |
| GCST002346_6 | Breast cancer (early onset) | 4.000000e-11 |
| GCST002346_7 | Breast cancer (early onset) | 6.000000e-11 |
| GCST002346_8 | Breast cancer (early onset) | 7.000000e-11 |
| GCST002346_9 | Breast cancer (early onset) | 3.000000e-10 |
| GCST002782_24 | Waist-to-hip ratio adjusted for body mass index | 6.000000e-12 |
| GCST002782_25 | Waist-to-hip ratio adjusted for body mass index | 9.000000e-09 |
| GCST002782_26 | Waist-to-hip ratio adjusted for body mass index | 8.000000e-12 |
| GCST002782_27 | Waist-to-hip ratio adjusted for body mass index | 2.000000e-08 |
| GCST002782_63 | Waist-to-hip ratio adjusted for body mass index | 4.000000e-12 |
| GCST002782_64 | Waist-to-hip ratio adjusted for body mass index | 7.000000e-08 |
| GCST002782_65 | Waist-to-hip ratio adjusted for body mass index | 5.000000e-12 |
EFO canonical traits (19, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004530 | triglyceride measurement |
| EFO:0005951 | sexual dimorphism |
| EFO:0008111 | diet measurement |
| EFO:0004501 | HOMA-IR |
| EFO:0007788 | BMI-adjusted waist-hip ratio |
| EFO:0004340 | body mass index |
| EFO:0004531 | urate measurement |
| EFO:0007789 | BMI-adjusted waist circumference |
| EFO:0004343 | waist-hip ratio |
| EFO:0004318 | smoking behavior |
| EFO:0008002 | physical activity measurement |
| EFO:0008434 | initial pursuit acceleration |
| EFO:0008007 | age at assessment |
| EFO:0008343 | sex interaction measurement |
| EFO:0004314 | forced expiratory volume |
| EFO:0003924 | hair color |
| EFO:0004346 | neuroimaging measurement |
| EFO:0005665 | white matter hyperintensity measurement |
| EFO:0004533 | alkaline phosphatase measurement |
MeSH disease descriptors (3)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D006061 | Gonadal Dysgenesis, 46,XY | C12.050.351.875.253.096.687; C12.050.351.875.253.309.388; C12.200.706.316.096.687; C12.200.706.316.309.388; C12.800.316.096.687; C12.800.316.309.388; C16.131.939.316.096.687; C16.131.939.316.309.388; C19.391.119.096.687; C19.391.119.309.388 |
| D034381 | Hearing Loss | C09.218.458.341; C10.597.751.418.341; C23.888.592.763.393.341 |
| D009386 | Neoplastic Syndromes, Hereditary | C04.700; C16.320.700 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL3956 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
31 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 295,629 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1171837 | PONATINIB | 4 | 8,955 |
| CHEMBL1336 | SORAFENIB | 4 | 86,060 |
| CHEMBL1789941 | RUXOLITINIB | 4 | 11,547 |
| CHEMBL1946170 | REGORAFENIB | 4 | 12,678 |
| CHEMBL2105759 | BARICITINIB | 4 | 6,741 |
| CHEMBL288441 | BOSUTINIB | 4 | 12,255 |
| CHEMBL3348923 | TOVORAFENIB | 4 | 834 |
| CHEMBL3545110 | RIBOCICLIB | 4 | 8,018 |
| CHEMBL477772 | PAZOPANIB | 4 | 15,540 |
| CHEMBL5416410 | DASATINIB | 4 | 655 |
| CHEMBL553 | ERLOTINIB | 4 | 108,300 |
| CHEMBL601719 | CRIZOTINIB | 4 | 14,403 |
| CHEMBL2087361 | ICOTINIB | 3 | 2,802 |
| CHEMBL3544983 | TESEVATINIB | 3 | 2,819 |
| CHEMBL603469 | LESTAURTINIB | 3 | |
| CHEMBL230011 | TG100-115 | 2 | 1,504 |
| CHEMBL2386889 | SCH-900776 | 2 | 740 |
| CHEMBL253969 | OSI-632 | 2 | 1,150 |
| CHEMBL3039525 | GOLVATINIB | 2 | 535 |
| CHEMBL384304 | RG-547 | 2 | 93 |
| CHEMBL402548 | DANUSERTIB | 2 | |
| CHEMBL495727 | AT-9283 | 2 | |
| CHEMBL607707 | PELITINIB | 2 | |
| CHEMBL1908394 | GSK-461364 | 1 | |
| CHEMBL1908397 | KW-2449 | 1 | |
| CHEMBL2138625 | AV-412 FREE BASE | 1 | |
| CHEMBL3577124 | LY-3009120 | 1 | |
| CHEMBL4289017 | PF-03814735 | 1 | |
| CHEMBL482967 | CYC-116 | 1 | |
| CHEMBL574738 | AST-487 | 1 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB clinical annotations
3 annotations.
| Variant | Type | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs16886403 | Efficacy | 3 | carboplatin;cisplatin;docetaxel;paclitaxel | Non-Small Cell Lung Carcinoma |
| rs726501 | Efficacy | 3 | carboplatin;cisplatin;docetaxel;erlotinib;gefitinib;paclitaxel | |
| rs96844 | Efficacy | 3 | Tumor necrosis factor alpha (TNF-alpha) inhibitors | Psoriasis |
PharmGKB variants
2 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs726501 | MAP3K1 | 3 | 3.00 | 1 | carboplatin;cisplatin;docetaxel;erlotinib;gefitinib;paclitaxel |
| rs16886403 | MAP3K1 | 3 | 3.00 | 1 | carboplatin;cisplatin;docetaxel;paclitaxel |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — STE11 family
Most potent curated ligand interactions (1 total), top 1:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| E6201 | Inhibition | 7.51 | pIC50 |
Binding affinities (BindingDB)
19 measured of 39 human assays (39 total across all organisms); most potent 19 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| 2-(4-Cyclopropyl-2-fluoroanilino)-3,4-difluoro-5-[[3-fluoro-2-(methylsulfamoylamino)pyridin-4-yl]methyl]benzamide | IC50 | 17 nM | US-11964950: Arylamide derivative having antitumor activity |
| 4-cyano-2-(2-fluoro-4-iodoanilino)benzoic acid | IC50 | 825 nM | US-20250387379: ARYL-ANILINE AND HETEROARYL-ANILINE COMPOUNDS FOR TREATMENT OF SKIN CANCERS |
| 4-cyano-2-(2-fluoro-4-iodoanilino)-N-methoxybenzamide | IC50 | 825 nM | US-20250387379: ARYL-ANILINE AND HETEROARYL-ANILINE COMPOUNDS FOR TREATMENT OF SKIN CANCERS |
| 4-cyano-N-ethoxy-2-(2-fluoro-4-iodoanilino)benzamide | IC50 | 825 nM | US-20250387379: ARYL-ANILINE AND HETEROARYL-ANILINE COMPOUNDS FOR TREATMENT OF SKIN CANCERS |
| 4-cyano-2-(2-fluoro-4-iodoanilino)-N-propoxybenzamide | IC50 | 825 nM | US-20250387379: ARYL-ANILINE AND HETEROARYL-ANILINE COMPOUNDS FOR TREATMENT OF SKIN CANCERS |
| 4-cyano-N-(2-hydroxyethoxy)-2-(4-iodo-2-methylanilino)benzamide | IC50 | 825 nM | US-20250387379: ARYL-ANILINE AND HETEROARYL-ANILINE COMPOUNDS FOR TREATMENT OF SKIN CANCERS |
| 4-cyano-N-(cyclopropylmethoxy)-2-(2-fluoro-4-iodoanilino)benzamide | IC50 | 825 nM | US-20250387379: ARYL-ANILINE AND HETEROARYL-ANILINE COMPOUNDS FOR TREATMENT OF SKIN CANCERS |
| 4-cyano-N-(cyclopropylmethoxy)-2-(4-iodo-2-methylanilino)benzamide | IC50 | 825 nM | US-20250387379: ARYL-ANILINE AND HETEROARYL-ANILINE COMPOUNDS FOR TREATMENT OF SKIN CANCERS |
| N-(2-aminoethoxy)-4-cyano-2-(2-fluoro-4-iodoanilino)benzamide | IC50 | 825 nM | US-20250387379: ARYL-ANILINE AND HETEROARYL-ANILINE COMPOUNDS FOR TREATMENT OF SKIN CANCERS |
| 2-(3-aminopropyl)-8-(2-fluoro-4-iodoanilino)-2,6-naphthyridin-1-one | IC50 | 825 nM | US-12378240: Naphthyridinone-aniline compounds for treatment of dermal disorders |
| 8-(2-fluoro-4-iodoanilino)-2-hydroxy-2,6-naphthyridin-1-one | IC50 | 825 nM | US-12378240: Naphthyridinone-aniline compounds for treatment of dermal disorders |
| 8-(2-fluoro-4-iodoanilino)-2-(2-hydroxyethoxy)-2,6-naphthyridin-1-one | IC50 | 825 nM | US-12378240: Naphthyridinone-aniline compounds for treatment of dermal disorders |
| 8-(2-fluoro-4-iodoanilino)-2-(2-hydroxyethoxy)-3,4-dihydro-2,6-naphthyridin-1-one | IC50 | 825 nM | US-12378240: Naphthyridinone-aniline compounds for treatment of dermal disorders |
| 2-ethoxy-8-(2-fluoro-4-iodoanilino)-3,4-dihydro-2,6-naphthyridin-1-one | IC50 | 825 nM | US-12378240: Naphthyridinone-aniline compounds for treatment of dermal disorders |
| 8-(2-fluoro-4-iodoanilino)-3,4-dihydro-2H-2,6-naphthyridin-1-one | IC50 | 825 nM | US-12378240: Naphthyridinone-aniline compounds for treatment of dermal disorders |
| 8-ethyl-5-oxo-2-[4-[[2-(trifluoromethyl)phenyl]carbamothioyl]piperazin-1-yl]pyrido[2,3-d]pyrimidine-6-carboxylic acid | IC50 | 825 nM | US-20250387379: ARYL-ANILINE AND HETEROARYL-ANILINE COMPOUNDS FOR TREATMENT OF SKIN CANCERS |
| 5-acetyl-2-(2-fluoro-4-iodoanilino)-N-(2-hydroxyethoxy)-4-methylthiophene-3-carboxamide | IC50 | 825 nM | US-12466818: Thienyl-aniline compounds for treatment of dermal disorders |
| 5-acetyl-N-[(2S)-2,3-dihydroxypropyl]-2-(2-fluoro-4-iodoanilino)-4-methylthiophene-3-carboxamide | IC50 | 825 nM | US-12466818: Thienyl-aniline compounds for treatment of dermal disorders |
| 5-acetyl-N-[(2R)-2,3-dihydroxypropyl]-2-(2-fluoro-4-iodoanilino)-4-methylthiophene-3-carboxamide | IC50 | 825 nM | US-12466818: Thienyl-aniline compounds for treatment of dermal disorders |
ChEMBL bioactivities
53 potent at pChembl≥5 of 55 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 8.10 | IC50 | 8 | nM | CHEMBL318804 |
| 7.51 | IC50 | 31 | nM | CHEMBL2216826 |
| 7.34 | IC50 | 46 | nM | CHEMBL1097700 |
| 7.01 | IC50 | 98 | nM | LY-3009120 |
| 7.01 | Kd | 97 | nM | PELITINIB |
| 6.97 | Kd | 107 | nM | BOSUTINIB |
| 6.97 | Kd | 106 | nM | GSK-461364 |
| 6.87 | Kd | 135 | nM | OSI-632 |
| 6.46 | Kd | 350 | nM | STAUROSPORINE |
| 6.41 | IC50 | 391 | nM | STAUROSPORINE |
| 6.33 | Kd | 465 | nM | REGORAFENIB |
| 6.32 | IC50 | 474 | nM | STAUROSPORINE |
| 6.31 | Kd | 493 | nM | PONATINIB |
| 6.31 | IC50 | 485 | nM | STAUROSPORINE |
| 6.29 | Kd | 509 | nM | DANUSERTIB |
| 6.08 | IC50 | 840 | nM | CHEMBL5092087 |
| 5.98 | Kd | 1055 | nM | CHEMBL3991933 |
| 5.96 | Kd | 1106 | nM | GOLVATINIB |
| 5.96 | IC50 | 1100 | nM | CHEMBL5087055 |
| 5.96 | Kd | 1100 | nM | CRIZOTINIB |
| 5.90 | Kd | 1263 | nM | DASATINIB |
| 5.90 | Kd | 1254 | nM | SCH-900776 |
| 5.89 | Kd | 1278 | nM | CUDC-101 |
| 5.85 | Kd | 1399 | nM | AT-9283 |
| 5.82 | Kd | 1500 | nM | GSK-461364 |
| 5.76 | Kd | 1743 | nM | TESEVATINIB |
| 5.75 | Kd | 1800 | nM | AST-487 |
| 5.74 | Kd | 1806 | nM | CHEMBL3990456 |
| 5.73 | Kd | 1867 | nM | CRIZOTINIB |
| 5.72 | Kd | 1891 | nM | BARICITINIB |
| 5.72 | Kd | 1925 | nM | CHEMBL5653589 |
| 5.68 | Kd | 2090 | nM | TOVORAFENIB |
| 5.67 | Kd | 2130 | nM | KW-2449 |
| 5.66 | Kd | 2184 | nM | PF-03814735 |
| 5.66 | Kd | 2187 | nM | CHEMBL2376648 |
| 5.65 | Kd | 2247 | nM | ERLOTINIB |
| 5.61 | Kd | 2447 | nM | TG100-115 |
| 5.60 | Kd | 2500 | nM | CHEMBL1241674 |
| 5.54 | Kd | 2900 | nM | PAZOPANIB |
| 5.48 | ED50 | 3335 | nM | CHEMBL5653589 |
| 5.46 | Kd | 3500 | nM | RG-547 |
| 5.45 | Kd | 3534 | nM | CHEMBL3752910 |
| 5.42 | Kd | 3783 | nM | SORAFENIB |
| 5.38 | Kd | 4131 | nM | ICOTINIB |
| 5.38 | Kd | 4200 | nM | RUXOLITINIB |
| 5.37 | Kd | 4300 | nM | TAE-684 |
| 5.36 | Kd | 4400 | nM | LESTAURTINIB |
| 5.36 | Kd | 4400 | nM | BOSUTINIB |
| 5.21 | ED50 | 6123 | nM | CHEMBL3752910 |
| 5.10 | Kd | 7960 | nM | AV-412 FREE BASE |
PubChem BioAssay actives
52 with measured affinity, of 506 total; 44 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-[3-chloro-4-(1-methylimidazol-2-yl)sulfanylanilino]-6-methoxy-7-(3-morpholin-4-ylpropoxy)quinoline-3-carbonitrile | 102175: Inhibition of MEK-1 Kinase phosphorylation in LoVo cells | ic50 | 0.0080 | uM |
| (4S,5S,6Z,9S,10R,12E)-16-(ethylamino)-9,10,18-trihydroxy-4,5-dimethyl-3-oxabicyclo[12.4.0]octadeca-1(14),6,12,15,17-pentaene-2,8-dione | 719901: Inhibition of MEKK1 | ic50 | 0.0310 | uM |
| (E)-N-[4-(3-chloro-4-fluoroanilino)-3-cyano-7-ethoxyquinolin-6-yl]-4-(dimethylamino)but-2-enamide | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.0970 | uM |
| 1-(3,3-dimethylbutyl)-3-[2-fluoro-4-methyl-5-[7-methyl-2-(methylamino)pyrido[2,3-d]pyrimidin-6-yl]phenyl]urea | 1226900: Competitive binding affinity to MAP3K1 in human A375 cells after 15 mins in presence of ATP analogue | ic50 | 0.0980 | uM |
| 5-[6-[(4-methylpiperazin-1-yl)methyl]benzimidazol-1-yl]-3-[(1R)-1-[2-(trifluoromethyl)phenyl]ethoxy]thiophene-2-carboxamide | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.1060 | uM |
| Bosutinib | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.1070 | uM |
| 3-[(4-bromo-2,6-difluorophenyl)methoxy]-5-(4-pyrrolidin-1-ylbutylcarbamoylamino)-1,2-thiazole-4-carboxamide | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.1350 | uM |
| (2S,3R,4R,6R)-3-methoxy-2-methyl-4-(methylamino)-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-16-one | 625026: Binding constant for MAP3K1 kinase domain | kd | 0.3500 | uM |
| regorafenib anhydrous | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.4650 | uM |
| Ponatinib | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.4930 | uM |
| N-[5-[(2R)-2-methoxy-2-phenylacetyl]-4,6-dihydro-1H-pyrrolo[3,4-d]pyrazol-3-yl]-4-(4-methylpiperazin-1-yl)benzamide | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.5090 | uM |
| 4-amino-7-methyl-2-[[5-methyl-1-[(3S)-oxolan-3-yl]pyrazol-4-yl]amino]-6-[(2R)-2-methylpyrrolidin-1-yl]pyrrolo[2,3-d]pyrimidine-5-carbonitrile | 1817520: Inhibition of MAP3K1 expressed in human PBMCs measured by KiNativ profiling analysis | ic50 | 0.8400 | uM |
| 3-(2-methyl-1,3-benzoxazol-5-yl)-1-propan-2-ylpyrazolo[3,4-d]pyrimidin-4-amine | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 1.0550 | uM |
| Crizotinib | 625026: Binding constant for MAP3K1 kinase domain | kd | 1.1000 | uM |
| 4-amino-7-methyl-2-[[5-methyl-1-[(3R)-oxolan-3-yl]pyrazol-4-yl]amino]-6-[(2R)-2-methylpyrrolidin-1-yl]pyrrolo[2,3-d]pyrimidine-5-carbonitrile | 1817520: Inhibition of MAP3K1 expressed in human PBMCs measured by KiNativ profiling analysis | ic50 | 1.1000 | uM |
| 1-N’-[2-fluoro-4-[[2-[[4-(4-methylpiperazin-1-yl)piperidine-1-carbonyl]amino]-4-pyridinyl]oxy]phenyl]-1-N-(4-fluorophenyl)cyclopropane-1,1-dicarboxamide | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 1.1060 | uM |
| 6-bromo-3-(1-methylpyrazol-4-yl)-5-[(3R)-piperidin-3-yl]pyrazolo[1,5-a]pyrimidin-7-amine | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 1.2540 | uM |
| N-(2-chloro-6-methylphenyl)-2-[[6-[4-(2-hydroxyethyl)piperazin-1-yl]-2-methylpyrimidin-4-yl]amino]-1,3-thiazole-5-carboxamide;hydrate | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 1.2630 | uM |
| 7-[4-(3-ethynylanilino)-7-methoxyquinazolin-6-yl]oxy-N-hydroxyheptanamide | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 1.2780 | uM |
| 1-cyclopropyl-3-[5-[6-(morpholin-4-ylmethyl)-1H-benzimidazol-2-yl]-1H-pyrazol-4-yl]urea | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 1.3990 | uM |
| 7-[[(3aS,6aR)-2-methyl-3,3a,4,5,6,6a-hexahydro-1H-cyclopenta[c]pyrrol-5-yl]methoxy]-N-(3,4-dichloro-2-fluorophenyl)-6-methoxyquinazolin-4-amine | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 1.7430 | uM |
| 1-[4-[(4-ethylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl]-3-[4-[6-(methylamino)pyrimidin-4-yl]oxyphenyl]urea | 625026: Binding constant for MAP3K1 kinase domain | kd | 1.8000 | uM |
| 2-amino-2-cyclohexyl-N-[2-(1-methylpyrazol-4-yl)-9-oxo-3,10,11-triazatricyclo[6.4.1.04,13]trideca-1,4,6,8(13),11-pentaen-6-yl]acetamide | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 1.8060 | uM |
| Baricitinib | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 1.8910 | uM |
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2148689: Binding affinity to human MAP3K1 incubated for 45 mins by Kinobead based pull down assay | kd | 1.9249 | uM |
| Tovorafenib | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 2.0900 | uM |
| [4-[(E)-2-(1H-indazol-3-yl)ethenyl]phenyl]-piperazin-1-ylmethanone | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 2.1300 | uM |
| N-[2-[4-[[4-(cyclobutylamino)-5-(trifluoromethyl)pyrimidin-2-yl]amino]-11-azatricyclo[6.2.1.02,7]undeca-2(7),3,5-trien-11-yl]-2-oxoethyl]acetamide | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 2.1840 | uM |
| 6-amino-5-[(1R)-1-(2,6-dichloro-3-fluorophenyl)ethoxy]-N-[4-(4-methylpiperazine-1-carbonyl)phenyl]pyridazine-3-carboxamide | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 2.1870 | uM |
| Erlotinib | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 2.2470 | uM |
| 3-[2,4-diamino-7-(3-hydroxyphenyl)pteridin-6-yl]phenol | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 2.4470 | uM |
| 2-(4-amino-1-propan-2-ylpyrazolo[3,4-d]pyrimidin-3-yl)-1H-indol-5-ol | 625026: Binding constant for MAP3K1 kinase domain | kd | 2.5000 | uM |
| Pazopanib | 625026: Binding constant for MAP3K1 kinase domain | kd | 2.9000 | uM |
| [4-amino-2-[(1-methylsulfonylpiperidin-4-yl)amino]pyrimidin-5-yl]-(2,3-difluoro-6-methoxyphenyl)methanone | 625026: Binding constant for MAP3K1 kinase domain | kd | 3.5000 | uM |
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2148689: Binding affinity to human MAP3K1 incubated for 45 mins by Kinobead based pull down assay | kd | 3.5342 | uM |
| Sorafenib | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 3.7830 | uM |
| N-(3-ethynylphenyl)-2,5,8,11-tetraoxa-15,17-diazatricyclo[10.8.0.014,19]icosa-1(12),13,15,17,19-pentaen-18-amine | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 4.1310 | uM |
| Ruxolitinib | 625026: Binding constant for MAP3K1 kinase domain | kd | 4.2000 | uM |
| 5-chloro-2-N-[2-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidin-1-yl]phenyl]-4-N-(2-propan-2-ylsulfonylphenyl)pyrimidine-2,4-diamine | 625026: Binding constant for MAP3K1 kinase domain | kd | 4.3000 | uM |
| (15S,16S,18R)-16-hydroxy-16-(hydroxymethyl)-15-methyl-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8,10,12,20,22,24,26-nonaen-3-one | 507596: Binding affinity to MAP3K1 | kd | 4.4000 | uM |
| N-[4-(3-chloro-4-fluoroanilino)-7-[3-methyl-3-(4-methylpiperazin-1-yl)but-1-ynyl]quinazolin-6-yl]prop-2-enamide | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 7.9600 | uM |
| 3-[[5-[3-(4-methoxyphenyl)benzimidazol-5-yl]-1,3,4-oxadiazol-2-yl]sulfanylmethyl]benzonitrile | 1799156: GSK-3beta Kinase Inhibition Assay from Article 10.1016/j.bmc.2009.01.019: “Design, synthesis and structure-activity relationships of 1,3,4-oxadiazole derivatives as novel inhibitors of glycogen synthase kinase-3beta.” | ic50 | 8.1000 | uM |
| 4-methyl-5-[2-(4-morpholin-4-ylanilino)pyrimidin-4-yl]-1,3-thiazol-2-amine | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 8.1590 | uM |
| Ribociclib | 1425044: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 12.4730 | uM |
CTD chemical–gene interactions
69 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | increases expression, affects cotreatment, decreases expression, affects expression | 4 |
| sodium arsenite | increases abundance, affects methylation, decreases expression | 4 |
| Valproic Acid | increases methylation, affects expression, decreases expression | 4 |
| Curcumin | increases expression, decreases expression, decreases reaction | 3 |
| pyrazolanthrone | decreases reaction, increases activity, increases response to substance, increases expression | 2 |
| Arsenic | affects methylation, decreases expression, increases abundance | 2 |
| Benzo(a)pyrene | decreases methylation, increases expression, decreases reaction | 2 |
| Quercetin | increases phosphorylation, increases expression | 2 |
| Tretinoin | decreases expression, increases expression | 2 |
| Cadmium Chloride | increases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| 3-((6-(2-methoxyphenyl)pyrimidin-4-yl)amino)phenyl)methane sulfonamide | decreases expression | 1 |
| FR900359 | affects phosphorylation | 1 |
| geldanamycin | increases expression | 1 |
| 2-anisidine | decreases expression | 1 |
| tanshinone | decreases expression | 1 |
| sulindac sulfide | decreases expression | 1 |
| ochratoxin A | decreases expression | 1 |
| 3,8-dihydroxy-6H-dibenzo(b,d)pyran-6-one | decreases expression | 1 |
| potassium chromate(VI) | affects cotreatment, decreases expression | 1 |
| nickel sulfate | decreases expression | 1 |
| beta-methylcholine | affects expression | 1 |
| epigallocatechin gallate | affects cotreatment, decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| perfluorooctane sulfonic acid | decreases expression | 1 |
| CGP 52608 | increases reaction, affects binding | 1 |
| SB 203580 | decreases reaction, increases activity, increases response to substance | 1 |
| aspartyl-glutamyl-valyl-aspartal | decreases reaction, increases cleavage | 1 |
| lipopolysaccharide, E. coli O26-B6 | decreases expression | 1 |
| 3,5-bis(2-fluorobenzylidene)piperidin-4-one | decreases reaction, increases expression | 1 |
ChEMBL screening assays
167 unique, capped per target: 165 binding, 1 admet, 1 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1031537 | Binding | Inhibition of MEKK1 | Design, synthesis and structure-activity relationships of 1,3,4-oxadiazole derivatives as novel inhibitors of glycogen synthase kinase-3beta. — Bioorg Med Chem |
| CHEMBL4811091 | ADMET | Inhibition of human MEKK1 at 1 uM measured after 30 mins by [gamma-33P]-ATP assay | Preparation, biological & cheminformatics-based assessment of N2,N4-diphenylpyrimidine-2,4-diamine as potential Kinase-targeted antimalarials. — Bioorg Med Chem |
| CHEMBL709029 | Functional | Inhibition of MEK-1 Kinase phosphorylation in LoVo cells | Synthesis and evaluation of 4-anilino-6,7-dialkoxy-3-quinolinecarbonitriles as inhibitors of kinases of the Ras-MAPK signaling cascade. — Bioorg Med Chem Lett |
Cellosaurus cell lines
7 cell lines: 6 cancer cell line, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B1WG | Abcam HeLa MAP3K1 KO | Cancer cell line | Female |
| CVCL_D8PX | Ubigene HCT 116 MAP3K1 KO | Cancer cell line | Male |
| CVCL_D9J8 | Ubigene HEK293 MAP3K1 KO | Transformed cell line | Female |
| CVCL_E0H6 | Ubigene HeLa MAP3K1 KO | Cancer cell line | Female |
| CVCL_SW52 | HAP1 MAP3K1 (-) 1 | Cancer cell line | Male |
| CVCL_SW53 | HAP1 MAP3K1 (-) 2 | Cancer cell line | Male |
| CVCL_SW54 | HAP1 MAP3K1 (-) 3 | Cancer cell line | Male |
Clinical trials (associated diseases)
600 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00014638 | PHASE4 | COMPLETED | Letrozole in Treating Postmenopausal Women With Metastatic Breast Cancer |
| NCT00022386 | PHASE4 | COMPLETED | Epoetin Alfa in Treating Chemotherapy-Related Anemia in Women With Stage I, Stage II, or Stage III Breast Cancer |
| NCT00029224 | PHASE4 | COMPLETED | Treatment With Zoledronic Acid in Patients With Breast Cancer, Multiple Myeloma, and Prostate Cancer With Cancer Related Bone Lesions |
| NCT00030758 | PHASE4 | UNKNOWN | Filgrastim or Pegfilgrastim in Preventing Neutropenia in Women Receiving Chemotherapy Following Surgery for Breast Cancer |
| NCT00082277 | PHASE4 | COMPLETED | Anastrozole Biphosphonate Study in Postmenopausal Women With Hormone-Receptor-Positive Early Breast Cancer |
| NCT00087620 | PHASE4 | TERMINATED | A Study of Capecitabine In Combination With Docetaxel vs Capecitabine Followed by Docetaxel As First-Line Treatment For Metastatic Breast Cancer |
| NCT00121836 | PHASE4 | COMPLETED | A Study of Xeloda (Capecitabine) in Women With HER2-Negative Metastatic Breast Cancer |
| NCT00126360 | PHASE4 | UNKNOWN | STARS Breast Trial (Study of Anastrozole and Radiotherapy Sequencing Pilot) |
| NCT00127933 | PHASE4 | COMPLETED | XeNA Study - A Study of Xeloda (Capecitabine) in Patients With Invasive Breast Cancer |
| NCT00128297 | PHASE4 | COMPLETED | Pamidronate Administration in Breast Cancer Patients With Bone Metastases |
| NCT00129597 | PHASE4 | UNKNOWN | Effect of Ketalar to Prevent Postoperative Chronic Pain After Mastectomy |
| NCT00131170 | PHASE4 | COMPLETED | Paravertebral Block for Breast Surgery |
| NCT00156039 | PHASE4 | COMPLETED | Randomized Trial of Follow-up Strategies in Breast Cancer |
| NCT00160901 | PHASE4 | COMPLETED | Complementary Therapies for the Reduction of Side Effects During Chemotherapy for Breast Cancer |
| NCT00171847 | PHASE4 | TERMINATED | Study of the Efficacy and Safety of Letrozole Combined With Trastuzumab in Patients With Metastatic Breast Cancer |
| NCT00176046 | PHASE4 | COMPLETED | Mistletoe Extract in Early or Advanced Breast Cancer, A Feasibility Study |
| NCT00190697 | PHASE4 | COMPLETED | A Study of LY353381 (Arzoxifene) for Patients Who Benefitted From This Drug in Other Oncology Trials and Wished to Continue Treatment |
| NCT00234195 | PHASE4 | COMPLETED | Wellbutrin XL, Major Depressive Disorder and Breast Cancer |
| NCT00237133 | PHASE4 | COMPLETED | Treatment of Locally Advanced Breast Cancer With Letrozole in Postmenopausal Women |
| NCT00237224 | PHASE4 | COMPLETED | Open Label Study of Postmenopausal Women With ER and /or PgR Positive Breast Cancer Treated With Letrozole |
| NCT00241046 | PHASE4 | TERMINATED | Letrozole in the Treatment of 1st and 2nd Line Hormone Receptor Positive Breast Cancer: Pre-therapeutic Risk Assessment |
| NCT00277160 | PHASE4 | COMPLETED | A Study of Primary Prophylaxis With Neulasta (Pegfilgrastim) Versus Secondary Prophylaxis After Chemotherapy in Elderly Subjects (>/= 65 Years Old) With Cancer |
| NCT00323479 | PHASE4 | COMPLETED | Arthralgia During Anastrozole Therapy for Breast Cancer |
| NCT00334139 | PHASE4 | COMPLETED | Effect of Zoledronic Acid on Bone Metabolism in Patients With Bone Metastasis and Prostate or Breast Cancer |
| NCT00356148 | PHASE4 | COMPLETED | The Efficacy of Prophylactic Antibiotic Administration During Breast Cancer Surgery in Overweight Patients. |
| NCT00372476 | PHASE4 | COMPLETED | Efficacy and Safety of Imatinib and Vinorelbine in Patients With Advanced Breast Cancer |
| NCT00413491 | PHASE4 | UNKNOWN | National Screening in Denmark With MR Versus Mammography and Ultrasound of Women With BRCA1 or BRCA2 Mutations |
| NCT00484614 | PHASE4 | UNKNOWN | Study the Role of Positron Emission Mammography in Pre-surgical Planning for Breast Cancer |
| NCT00485953 | PHASE4 | COMPLETED | Effect of Bisphosphonate on Bone Loss in Postmenopausal Women With Breast Cancer Initiating Aromatase Inhibitor Therapy |
| NCT00496678 | PHASE4 | COMPLETED | Trial of Patient Navigation-Activation |
| NCT00531973 | PHASE4 | UNKNOWN | A Study of Liposomal Doxorubicin in Women With Breast Cancer Exploiting Tissue Doppler Imaging |
| NCT00537771 | PHASE4 | COMPLETED | Liver Safety Under Upfront Arimidex vs Tamoxifen |
| NCT00544986 | PHASE4 | COMPLETED | A Prospective,Open-label Study of Anastrozole in Post-menopausal Women With Hormone Sensitive Advanced Breast Cancer |
| NCT00613275 | PHASE4 | COMPLETED | Patient Navigation in the Safety Net:CONNECTeDD |
| NCT00638599 | PHASE4 | COMPLETED | Comparison of Laryngeal Mask Airway (LMA®) and Tracheal Tube in Modified Radical Mastectomy on Breast Cancer |
| NCT00647075 | PHASE4 | UNKNOWN | Yunzhi as Dietary Supplement in Breast Cancer |
| NCT00688909 | PHASE4 | COMPLETED | Rheumatological Evaluation of Anastrozole and Letrozole as Adjuvant Treatment in Post-menopausal Women With Breast Cancer |
| NCT00699101 | PHASE4 | TERMINATED | Using the Conture® Multi-Lumen Balloon to Deliver Accelerated Partial Breast Brachytherapy |
| NCT00742222 | PHASE4 | COMPLETED | Electronic Xoft Intersociety Brachytherapy Trial: Electronic Brachytherapy (EBT) For Treatment of Early Stage Breast Cancer |
| NCT00754767 | PHASE4 | TERMINATED | L-Carnitine L-Tartrate in Preventing Peripheral Neuropathy Caused By Chemotherapy in Women With Metastatic Breast Cancer |
Related Atlas pages
- Associated diseases: 46,XY sex reversal 6, 46,XY complete gonadal dysgenesis, 46,XY partial gonadal dysgenesis, breast carcinoma
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): 46,XY complete gonadal dysgenesis, 46,XY partial gonadal dysgenesis, 46,XY sex reversal 6, breast cancer, ovarian neoplasm