MAP3K10
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Also known as MSTMEKK10
Summary
MAP3K10 (mitogen-activated protein kinase kinase kinase 10, HGNC:6849) is a protein-coding gene on chromosome 19q13.2, encoding Mitogen-activated protein kinase kinase kinase 10 (Q02779). Activates the JUN N-terminal pathway.
The protein encoded by this gene is a member of the serine/threonine kinase family. This kinase has been shown to activate MAPK8/JNK and MKK4/SEK1, and this kinase itself can be phoshorylated, and thus activated by JNK kinases. This kinase functions preferentially on the JNK signaling pathway, and is reported to be involved in nerve growth factor (NGF) induced neuronal apoptosis.
Source: NCBI Gene 4294 — RefSeq curated summary.
At a glance
- GWAS associations: 2
- Clinical variants (ClinVar): 148 total
- Druggable target: yes — 15 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_002446
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:6849 |
| Approved symbol | MAP3K10 |
| Name | mitogen-activated protein kinase kinase kinase 10 |
| Location | 19q13.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | MST, MEKK10 |
| Ensembl gene | ENSG00000130758 |
| Ensembl biotype | protein_coding |
| OMIM | 600137 |
| Entrez | 4294 |
Gene structure
Transcript identifiers
Ensembl transcripts: 12 — 5 protein_coding, 3 nonsense_mediated_decay, 3 retained_intron, 1 protein_coding_CDS_not_defined
ENST00000253055, ENST00000593502, ENST00000593906, ENST00000594569, ENST00000594791, ENST00000594951, ENST00000597986, ENST00000601702, ENST00000856942, ENST00000856945, ENST00000933473, ENST00000941194
RefSeq mRNA: 1 — MANE Select: NM_002446
NM_002446
CCDS: CCDS12549
Canonical transcript exons
ENST00000253055 — 10 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000706439 | 40198375 | 40198555 |
| ENSE00000706442 | 40204485 | 40204633 |
| ENSE00001139930 | 40214970 | 40215575 |
| ENSE00001233426 | 40191426 | 40192713 |
| ENSE00003459811 | 40205121 | 40205296 |
| ENSE00003497961 | 40213076 | 40213188 |
| ENSE00003506477 | 40209103 | 40209219 |
| ENSE00003622117 | 40205911 | 40206157 |
| ENSE00003627565 | 40213517 | 40214221 |
| ENSE00003644900 | 40212805 | 40212976 |
Expression profiles
Bgee: expression breadth ubiquitous, 187 present calls, max score 96.75.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 6.9490 / max 108.4932, expressed in 1732 samples.
FANTOM5 promoters (7 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 175818 | 4.0986 | 1614 |
| 175819 | 1.0781 | 614 |
| 175820 | 1.0665 | 519 |
| 175817 | 0.2957 | 100 |
| 175816 | 0.1561 | 65 |
| 175821 | 0.1305 | 61 |
| 175822 | 0.1235 | 41 |
Top tissues by expression
260 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right frontal lobe | UBERON:0002810 | 96.75 | gold quality |
| prefrontal cortex | UBERON:0000451 | 96.43 | gold quality |
| cingulate cortex | UBERON:0003027 | 96.39 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 96.34 | gold quality |
| amygdala | UBERON:0001876 | 95.84 | gold quality |
| type B pancreatic cell | CL:0000169 | 95.77 | silver quality |
| nucleus accumbens | UBERON:0001882 | 95.05 | gold quality |
| putamen | UBERON:0001874 | 94.88 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 94.77 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 94.51 | gold quality |
| cortical plate | UBERON:0005343 | 94.40 | gold quality |
| caudate nucleus | UBERON:0001873 | 94.09 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 94.08 | gold quality |
| cerebellar cortex | UBERON:0002129 | 94.07 | gold quality |
| olfactory bulb | UBERON:0002264 | 93.56 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 93.25 | gold quality |
| neocortex | UBERON:0001950 | 93.13 | gold quality |
| frontal cortex | UBERON:0001870 | 93.12 | gold quality |
| frontal lobe | UBERON:0016525 | 93.11 | gold quality |
| cerebellum | UBERON:0002037 | 92.77 | gold quality |
| lateral nuclear group of thalamus | UBERON:0002736 | 92.00 | silver quality |
| telencephalon | UBERON:0001893 | 91.94 | gold quality |
| triceps brachii | UBERON:0001509 | 91.43 | gold quality |
| cerebral cortex | UBERON:0000956 | 91.40 | gold quality |
| forebrain | UBERON:0001890 | 91.29 | gold quality |
| diaphragm | UBERON:0001103 | 91.20 | gold quality |
| brain | UBERON:0000955 | 91.12 | gold quality |
| lateral globus pallidus | UBERON:0002476 | 91.06 | silver quality |
| central nervous system | UBERON:0001017 | 91.00 | gold quality |
| vena cava | UBERON:0004087 | 90.79 | silver quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 0.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | no | 2.45 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): TCF3
miRNA regulators (miRDB)
33 targeting MAP3K10, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-MIR-181A-5P | 99.99 | 72.96 | 2995 |
| HSA-MIR-181B-5P | 99.99 | 72.97 | 2996 |
| HSA-MIR-181C-5P | 99.99 | 72.95 | 2996 |
| HSA-MIR-181D-5P | 99.99 | 73.04 | 2997 |
| HSA-MIR-6721-5P | 99.93 | 68.92 | 2981 |
| HSA-MIR-95-5P | 99.89 | 72.17 | 3973 |
| HSA-MIR-345-3P | 99.89 | 70.23 | 1421 |
| HSA-MIR-222-3P | 99.86 | 71.35 | 1337 |
| HSA-MIR-3121-3P | 99.82 | 71.96 | 3630 |
| HSA-MIR-4319 | 99.76 | 69.83 | 2586 |
| HSA-MIR-6752-3P | 99.72 | 66.71 | 1587 |
| HSA-MIR-670-5P | 99.67 | 69.94 | 1565 |
| HSA-MIR-2113 | 99.58 | 71.22 | 1521 |
| HSA-MIR-486-3P | 99.51 | 66.82 | 1901 |
| HSA-MIR-1207-5P | 99.49 | 69.11 | 2983 |
| HSA-MIR-6727-3P | 99.49 | 65.92 | 1333 |
| HSA-MIR-125A-5P | 99.36 | 70.59 | 1640 |
| HSA-MIR-125B-5P | 99.36 | 70.36 | 1662 |
| HSA-MIR-155-5P | 99.35 | 70.16 | 1509 |
| HSA-MIR-4722-3P | 99.35 | 65.22 | 1099 |
| HSA-MIR-361-3P | 99.19 | 66.45 | 1381 |
| HSA-MIR-6852-5P | 99.17 | 66.69 | 2073 |
| HSA-MIR-6734-3P | 99.15 | 66.27 | 1627 |
| HSA-MIR-4763-3P | 99.10 | 67.83 | 2649 |
| HSA-MIR-2355-5P | 98.83 | 65.51 | 1589 |
| HSA-MIR-7155-5P | 98.65 | 66.14 | 1290 |
| HSA-MIR-6881-5P | 98.16 | 67.38 | 665 |
| HSA-MIR-6793-3P | 97.66 | 65.78 | 1084 |
| HSA-MIR-4732-3P | 97.15 | 65.45 | 881 |
Literature-anchored findings (GeneRIF, showing 15)
- MLK2 has a role in vesicle formation and endosome recycling by binding to clathrin (PMID:12105200)
- demonstrate Alien-MLK2 interaction and also show that MLK2 is able to phosphorylate Alien; Alien, DAX-1 and thyroid hormone receptor mediated transcriptional silencing is strongly enhanced in the presence of active MLK2 (PMID:15062575)
- MLK2 and -3 are required for activation of JNK and p38 by ectopically expressed GCK (PMID:17584736)
- Hippocalcin and MLK2 were colocalized in the halo of Lewy bodies in Parkinson disease patients, and neither protein was detected in normal pigmented neurons. (PMID:19332348)
- Mixed lineage kinase phosphorylates transcription factor E47 and inhibits TrkB expression to link neuronal death and survival pathways (PMID:19801649)
- Data show that miR-181b contributed to proliferation of AML cells by targeting MLK2. (PMID:20596961)
- This study showed that show that RUNX3 is a principal and evolutionarily conserved component of the MST pathway. (PMID:21678419)
- Mechanism of MAP kinase activation by TNF requires Src-dependent activation of Vav, activation of Rac/Cdc42, and the engagement of the Rac/Cdc42 interaction site on MLK2 and 3. (PMID:21979919)
- Mechanism of MAP kinase activation by TNF requires Src-dependent activation of Vav, activation of Rac/Cdc42, and the engagement of the Rac/Cdc42 interaction site on MLK3. (PMID:21979919)
- A novel and important role for MAP3K10 in the proliferation and chemoresistance of pancreatic ductal adenocarcinoma. (PMID:23178452)
- MAP3K4 is sufficiently mediate the TGFbeta-induced phosphorylation of p38 MAPK in MEFs and HaCaT cells. (PMID:23760366)
- We identified a direct target of miR-155 as MAP3K10 in osteosarcoma (PMID:28214207)
- MST interaction with MOB1 is not essential for development and tissue growth control. (PMID:28947795)
- DNA methylationregulated miR1555p depresses sensitivity of esophageal carcinoma cells to radiation and multiple chemotherapeutic drugs via suppression of MAP3K10. (PMID:32323857)
- DNA methylation of the MAP3K10 gene may participate in the development of intracranial aneurysm. (PMID:36341729)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | map3k10 | ENSDARG00000055672 |
| mus_musculus | Map3k10 | ENSMUSG00000040390 |
| rattus_norvegicus | Map3k10 | ENSRNOG00000023521 |
Paralogs (23): MAP3K9 (ENSG00000006432), TESK2 (ENSG00000070759), MAP3K13 (ENSG00000073803), ARAF (ENSG00000078061), MAP3K20 (ENSG00000091436), RIPK2 (ENSG00000104312), LIMK1 (ENSG00000106683), TESK1 (ENSG00000107140), TNNI3K (ENSG00000116783), RIPK3 (ENSG00000129465), RAF1 (ENSG00000132155), RIPK1 (ENSG00000137275), MAP3K12 (ENSG00000139625), KSR1 (ENSG00000141068), MAP3K21 (ENSG00000143674), BRAF (ENSG00000157764), ILK (ENSG00000166333), MLKL (ENSG00000168404), KSR2 (ENSG00000171435), MOS (ENSG00000172680), MAP3K11 (ENSG00000173327), LIMK2 (ENSG00000182541), LRRK2 (ENSG00000188906)
Protein
Protein identifiers
Mitogen-activated protein kinase kinase kinase 10 — Q02779 (reviewed: Q02779)
Alternative names: Mixed lineage kinase 2, Protein kinase MST
All UniProt accessions (4): Q02779, M0R0A7, M0R1J8, M0R365
UniProt curated annotations — full annotation on UniProt →
Function. Activates the JUN N-terminal pathway.
Subunit / interactions. Homodimer. Interacts with SH3RF2.
Tissue specificity. Expressed in brain and skeletal muscle.
Post-translational modifications. Autophosphorylation on serine and threonine residues within the activation loop plays a role in enzyme activation.
Activity regulation. Homodimerization via the leucine zipper domains is required for autophosphorylation and subsequent activation.
Similarity. Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.
RefSeq proteins (1): NP_002437* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000719 | Prot_kinase_dom | Domain |
| IPR001245 | Ser-Thr/Tyr_kinase_cat_dom | Domain |
| IPR001452 | SH3_domain | Domain |
| IPR008271 | Ser/Thr_kinase_AS | Active_site |
| IPR011009 | Kinase-like_dom_sf | Homologous_superfamily |
| IPR016231 | MLK1-4 | Family |
| IPR017441 | Protein_kinase_ATP_BS | Binding_site |
| IPR035779 | MLK1-3_SH3 | Domain |
| IPR036028 | SH3-like_dom_sf | Homologous_superfamily |
| IPR051681 | Ser/Thr_Kinases-Pseudokinases | Family |
Pfam: PF07714, PF14604
Catalyzed reactions (Rhea), 2 shown:
- L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+) (RHEA:17989)
- L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+) (RHEA:46608)
UniProt features (37 total): modified residue 7, compositionally biased region 6, sequence conflict 5, region of interest 5, strand 4, domain 2, binding site 2, sequence variant 2, helix 2, chain 1, active site 1
Structure
Experimental structures (PDB)
1 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 2RF0 | X-RAY DIFFRACTION | 2 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q02779-F1 | 61.33 | 0.27 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 222 (proton acceptor)
Ligand- & substrate-binding residues (2): 104–112; 125
Post-translational modifications (7): 258, 262, 498, 502, 506, 558, 857
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 140 (showing top):
GOBP_REGULATION_OF_PHOSPHORYLATION, GOBP_PEPTIDYL_SERINE_MODIFICATION, GOBP_POSITIVE_REGULATION_OF_MAPK_CASCADE, GOBP_REGULATION_OF_TRANSFERASE_ACTIVITY, GOBP_POSITIVE_REGULATION_OF_CATALYTIC_ACTIVITY, GOBP_POSITIVE_REGULATION_OF_MOLECULAR_FUNCTION, GOBP_POSITIVE_REGULATION_OF_PHOSPHORUS_METABOLIC_PROCESS, GOBP_JNK_CASCADE, DER_IFN_BETA_RESPONSE_UP, GOBP_POSITIVE_REGULATION_OF_PROTEIN_SERINE_THREONINE_KINASE_ACTIVITY, GOBP_NEGATIVE_REGULATION_OF_MOLECULAR_FUNCTION, BIOCARTA_MAPK_PATHWAY, GOBP_POSITIVE_REGULATION_OF_INTRACELLULAR_SIGNAL_TRANSDUCTION, KUUSELO_PANCREATIC_CANCER_19Q13_AMPLIFICATION, GOBP_SMOOTHENED_SIGNALING_PATHWAY
GO Biological Process (13): apoptotic process (GO:0006915), signal transduction (GO:0007165), smoothened signaling pathway (GO:0007224), JNK cascade (GO:0007254), peptidyl-serine phosphorylation (GO:0018105), peptidyl-threonine phosphorylation (GO:0018107), positive regulation of apoptotic process (GO:0043065), obsolete negative regulation of DNA-binding transcription factor activity (GO:0043433), positive regulation of JUN kinase activity (GO:0043507), negative regulation of DNA-templated transcription (GO:0045892), positive regulation of JNK cascade (GO:0046330), protein autophosphorylation (GO:0046777), protein phosphorylation (GO:0006468)
GO Molecular Function (14): transcription corepressor activity (GO:0003714), protein kinase activity (GO:0004672), protein serine/threonine kinase activity (GO:0004674), JUN kinase kinase kinase activity (GO:0004706), ATP binding (GO:0005524), protein homodimerization activity (GO:0042803), bHLH transcription factor binding (GO:0043425), protein serine kinase activity (GO:0106310), nucleotide binding (GO:0000166), MAP kinase kinase kinase activity (GO:0004709), protein tyrosine kinase activity (GO:0004713), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740)
GO Cellular Component (1): cytoplasm (GO:0005737)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| protein phosphorylation | 3 |
| protein kinase activity | 3 |
| MAPK cascade | 2 |
| programmed cell death | 1 |
| apoptotic signaling pathway | 1 |
| execution phase of apoptosis | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| cell surface receptor signaling pathway | 1 |
| peptidyl-serine modification | 1 |
| peptidyl-threonine modification | 1 |
| apoptotic process | 1 |
| regulation of apoptotic process | 1 |
| positive regulation of programmed cell death | 1 |
| JUN kinase activity | 1 |
| positive regulation of MAP kinase activity | 1 |
| regulation of JUN kinase activity | 1 |
| DNA-templated transcription | 1 |
| regulation of DNA-templated transcription | 1 |
| negative regulation of RNA biosynthetic process | 1 |
| JNK cascade | 1 |
| positive regulation of MAPK cascade | 1 |
| regulation of JNK cascade | 1 |
| phosphorylation | 1 |
| protein modification process | 1 |
| transcription coregulator activity | 1 |
| negative regulation of DNA-templated transcription | 1 |
| kinase activity | 1 |
| phosphotransferase activity, alcohol group as acceptor | 1 |
| catalytic activity, acting on a protein | 1 |
| MAP kinase kinase kinase activity | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| identical protein binding | 1 |
| protein dimerization activity | 1 |
| DNA-binding transcription factor binding | 1 |
| nucleoside phosphate binding | 1 |
Protein interactions and networks
STRING
1712 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| MAP3K10 | MAPK8IP2 | Q13387 | 904 |
| MAP3K10 | KIF3A | Q9Y496 | 826 |
| MAP3K10 | MAPK8IP1 | Q9UQF2 | 746 |
| MAP3K10 | CNKSR1 | Q969H4 | 683 |
| MAP3K10 | CDC42 | P21181 | 615 |
| MAP3K10 | MAPK8 | P45983 | 518 |
| MAP3K10 | SMAD4 | Q13485 | 477 |
| MAP3K10 | KLC2 | Q9H0B6 | 450 |
| MAP3K10 | JUN | P05412 | 448 |
| MAP3K10 | KLC3 | Q6P597 | 448 |
| MAP3K10 | KLC4 | Q9NSK0 | 434 |
| MAP3K10 | KLC1 | Q07866 | 433 |
| MAP3K10 | SLC2A2 | P11168 | 423 |
| MAP3K10 | KIF17 | Q9P2E2 | 415 |
| MAP3K10 | MAP2K7 | O14733 | 405 |
IntAct
25 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| YWHAG | BLTP3B | psi-mi:“MI:2364”(proximity) | 0.640 |
| YWHAB | BLTP3B | psi-mi:“MI:2364”(proximity) | 0.610 |
| YWHAH | BLTP3B | psi-mi:“MI:2364”(proximity) | 0.570 |
| MAP3K10 | psi-mi:“MI:0407”(direct interaction) | 0.440 | |
| MAP3K10 | GARS1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| M | psi-mi:“MI:0914”(association) | 0.350 | |
| AXL | psi-mi:“MI:0914”(association) | 0.350 | |
| MAP3K10 | HSP90AA1 | psi-mi:“MI:0914”(association) | 0.350 |
| MAP3K21 | HSP90AA1 | psi-mi:“MI:0914”(association) | 0.350 |
| HPCA | ANKRD33B | psi-mi:“MI:0914”(association) | 0.350 |
| SFN | BLTP3B | psi-mi:“MI:2364”(proximity) | 0.270 |
| YWHAB | E2F8 | psi-mi:“MI:2364”(proximity) | 0.270 |
| YWHAE | E2F8 | psi-mi:“MI:2364”(proximity) | 0.270 |
| YWHAH | E2F8 | psi-mi:“MI:2364”(proximity) | 0.270 |
| YWHAQ | E2F8 | psi-mi:“MI:2364”(proximity) | 0.270 |
| YWHAZ | E2F8 | psi-mi:“MI:2364”(proximity) | 0.270 |
| YWHAE | PLEKHG3 | psi-mi:“MI:2364”(proximity) | 0.270 |
| YWHAQ | BLTP3B | psi-mi:“MI:2364”(proximity) | 0.270 |
| YWHAG | E2F8 | psi-mi:“MI:2364”(proximity) | 0.270 |
| ABL2 | MAP3K10 | psi-mi:“MI:0915”(physical association) | 0.000 |
| MAP3K21 | MAP3K10 | psi-mi:“MI:0915”(physical association) | 0.000 |
| LCOR | MAP3K10 | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (72): MAP2K4 (Biochemical Activity), KIFAP3 (Affinity Capture-Western), MAP3K10 (Two-hybrid), MAP3K10 (Biochemical Activity), POMC (Negative Genetic), SLC5A5 (Negative Genetic), MAPK12 (Negative Genetic), MAP3K10 (Negative Genetic), MAP3K10 (Negative Genetic), MAP3K10 (Negative Genetic), PRKCZ (Negative Genetic), MAP3K10 (Negative Genetic), TSPO (Negative Genetic), PIK3R2 (Negative Genetic), MAP3K10 (Negative Genetic)
ESM2 similar proteins: A0JPN4, A1YF56, A2A288, A2A9T0, A2AEV7, A6QQJ8, A7MCY6, A8MVW0, D3ZG83, D3ZZN9, O09039, O15037, O75427, O94983, O95382, O95947, P0C5W1, P98077, Q02779, Q16584, Q2M3V2, Q53LP3, Q5D1E7, Q5D1E8, Q66HA1, Q66K74, Q66L42, Q6DG50, Q6ZUM4, Q6ZW31, Q76KP1, Q7T0L4, Q7TSG2, Q80XI6, Q80Y50, Q8BIY3, Q8BLS7, Q8K120, Q8K1S6, Q8R5G7
Diamond homologs: A0A0K3AV08, A7J1T0, A7J1T2, A7MBB4, A8X775, D3ZG83, G5EE56, H2KZW3, O01700, O19064, O22558, O43283, O54967, O60674, P00529, P00533, P00534, P00535, P03949, P04412, P06239, P06240, P08069, P08922, P08941, P09760, P09769, P11273, P11362, P13388, P14234, P14616, P14617, P16092, P16591, P18461, P21802, P21803, P21804, P22607
SIGNOR signaling
9 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| MAPK8IP1 | up-regulates | MAP3K10 | binding |
| MAP3K10 | down-regulates | TCF3 | phosphorylation |
| MAP3K10 | “up-regulates activity” | MAP2K4 | phosphorylation |
| SH3RF1 | up-regulates | MAP3K10 | binding |
| MAP3K10 | “up-regulates activity” | NEUROD1 | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 19 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Activation of BAD and translocation to mitochondria | 7 | 355.3× | 8e-16 |
| Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex | 7 | 313.5× | 1e-15 |
| SARS-CoV-1 targets host intracellular signalling and regulatory pathways | 7 | 313.5× | 1e-15 |
| Activation of BH3-only proteins | 7 | 231.7× | 1e-14 |
| RHO GTPases activate PKNs | 7 | 148.0× | 3e-13 |
| Intrinsic Pathway for Apoptosis | 7 | 136.7× | 5e-13 |
| FOXO-mediated transcription | 5 | 112.0× | 4e-09 |
| SARS-CoV-1-host interactions | 7 | 82.0× | 2e-11 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| protein targeting | 5 | 107.8× | 8e-08 |
| intracellular protein localization | 7 | 43.1× | 2e-08 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
148 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 130 |
| Likely benign | 5 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
2037 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 19:40192711:ACA:A | donor_gain | 1.0000 |
| 19:40192714:G:GG | donor_gain | 1.0000 |
| 19:40198370:CACA:C | acceptor_loss | 1.0000 |
| 19:40198371:ACAG:A | acceptor_loss | 1.0000 |
| 19:40198372:C:G | acceptor_gain | 1.0000 |
| 19:40198373:A:AC | acceptor_loss | 1.0000 |
| 19:40198373:A:AG | acceptor_gain | 1.0000 |
| 19:40198374:G:GT | acceptor_gain | 1.0000 |
| 19:40198374:GT:G | acceptor_gain | 1.0000 |
| 19:40198374:GTC:G | acceptor_gain | 1.0000 |
| 19:40198374:GTCC:G | acceptor_gain | 1.0000 |
| 19:40198374:GTCCT:G | acceptor_gain | 1.0000 |
| 19:40198473:A:G | donor_gain | 1.0000 |
| 19:40198509:G:GT | donor_gain | 1.0000 |
| 19:40198540:GCA:G | donor_gain | 1.0000 |
| 19:40198553:G:GT | donor_gain | 1.0000 |
| 19:40198588:G:GT | donor_gain | 1.0000 |
| 19:40198588:G:T | donor_gain | 1.0000 |
| 19:40204483:A:AG | acceptor_gain | 1.0000 |
| 19:40204484:G:GG | acceptor_gain | 1.0000 |
| 19:40204484:GCT:G | acceptor_gain | 1.0000 |
| 19:40204484:GCTTC:G | acceptor_gain | 1.0000 |
| 19:40205117:CCAGA:C | acceptor_loss | 1.0000 |
| 19:40205118:CA:C | acceptor_loss | 1.0000 |
| 19:40205119:A:AG | acceptor_gain | 1.0000 |
| 19:40205119:AGA:A | acceptor_loss | 1.0000 |
| 19:40205120:G:GG | acceptor_gain | 1.0000 |
| 19:40205120:GA:G | acceptor_gain | 1.0000 |
| 19:40205120:GAA:G | acceptor_gain | 1.0000 |
| 19:40205120:GAAT:G | acceptor_gain | 1.0000 |
AlphaMissense
6122 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 19:40192356:T:C | F109L | 1.000 |
| 19:40192358:T:A | F109L | 1.000 |
| 19:40192358:T:G | F109L | 1.000 |
| 19:40192402:T:A | V124D | 1.000 |
| 19:40192404:A:C | K125Q | 1.000 |
| 19:40192404:A:G | K125E | 1.000 |
| 19:40192406:G:C | K125N | 1.000 |
| 19:40192406:G:T | K125N | 1.000 |
| 19:40192693:G:C | R221P | 1.000 |
| 19:40192696:A:C | D222A | 1.000 |
| 19:40192696:A:T | D222V | 1.000 |
| 19:40192701:A:G | K224E | 1.000 |
| 19:40192703:G:C | K224N | 1.000 |
| 19:40192703:G:T | K224N | 1.000 |
| 19:40198434:G:C | D248H | 1.000 |
| 19:40198435:A:C | D248A | 1.000 |
| 19:40198435:A:G | D248G | 1.000 |
| 19:40198435:A:T | D248V | 1.000 |
| 19:40198436:C:A | D248E | 1.000 |
| 19:40198436:C:G | D248E | 1.000 |
| 19:40198485:G:A | G265R | 1.000 |
| 19:40198485:G:C | G265R | 1.000 |
| 19:40198485:G:T | G265W | 1.000 |
| 19:40198486:G:A | G265E | 1.000 |
| 19:40198497:T:A | W269R | 1.000 |
| 19:40198497:T:C | W269R | 1.000 |
| 19:40198499:G:C | W269C | 1.000 |
| 19:40198499:G:T | W269C | 1.000 |
| 19:40198501:T:C | M270T | 1.000 |
| 19:40198516:T:A | I275N | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000070474 (19:40193149 G>A), RS1000142053 (19:40190820 G>A,C,T), RS1000168896 (19:40208319 C>A), RS1000511419 (19:40214258 C>T), RS1000708018 (19:40208565 T>A), RS1000734421 (19:40208326 C>G), RS1000744783 (19:40214588 G>A), RS1000805391 (19:40195595 G>T), RS1000989812 (19:40212523 A>G), RS1001353460 (19:40205177 C>CT), RS1001396478 (19:40207174 A>G), RS1001488773 (19:40200383 C>T), RS1001498719 (19:40200643 G>C), RS1001696451 (19:40194537 G>A), RS1001785045 (19:40201986 C>T)
Disease associations
OMIM: gene MIM:600137 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
2 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST003818_30 | Resting heart rate | 1.000000e-11 |
| GCST008362_31 | Birth weight | 3.000000e-09 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004344 | birth weight |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL2873 (SINGLE PROTEIN), CHEMBL6066128 (PROTEIN-PROTEIN INTERACTION)
Molecules with ChEMBL bioactivity
15 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 85,918 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1287853 | FEDRATINIB | 4 | 3,554 |
| CHEMBL180022 | NERATINIB | 4 | 9,404 |
| CHEMBL477772 | PAZOPANIB | 4 | 15,540 |
| CHEMBL502835 | NINTEDANIB | 4 | 8,545 |
| CHEMBL5416410 | DASATINIB | 4 | 655 |
| CHEMBL608533 | MIDOSTAURIN | 4 | 7,259 |
| CHEMBL290352 | CEP-1347 | 3 | 359 |
| CHEMBL428690 | ALVOCIDIB | 3 | 27,781 |
| CHEMBL522892 | DOVITINIB | 3 | 4,944 |
| CHEMBL603469 | LESTAURTINIB | 3 | |
| CHEMBL1230609 | FORETINIB | 2 | 3,096 |
| CHEMBL475251 | R-406 | 2 | 762 |
| CHEMBL572878 | TOZASERTIB | 2 | 2,998 |
| CHEMBL1084546 | PF-00562271 | 1 | 399 |
| CHEMBL1908397 | KW-2449 | 1 | 622 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — MLK subfamily
Most potent curated ligand interactions (2 total), top 2:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| CEP-1347 | Inhibition | 8.7 | pIC50 |
| URMC-099 | Inhibition | 7.38 | pIC50 |
Binding affinities (BindingDB)
13 measured of 13 human assays (13 total across all organisms); most potent 13 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| Staurosporine | KD | 1.7 nM |
| PKC-412 | KD | 190 nM |
| methyl (15S,16R,18R)-16-hydroxy-15-methyl-3-oxo-28-oxa-4,14,19-triazaoctacyclo[12.11.2.1^{15,18}.0^{2,6}.0^{7,27}.0^{8,13}.0^{19,26}.0^{20,25}]octacosa-1(26),2(6),7(27),8(13),9,11,20(25),21,23-nonaene-16-carboxylate | IC50 | 260 nM |
| 3,13-diazahexacyclo[14.8.0.0^{2,10}.0^{4,9}.0^{11,15}.0^{17,22}]tetracosa-1(16),2(10),4(9),5,7,11(15),17(22),18,20-nonaene-12,14-dione | IC50 | 339 nM |
| 3,13-diazahexacyclo[14.7.0.0^{2,10}.0^{4,9}.0^{11,15}.0^{17,22}]tricosa-1(16),2(10),4(9),5,7,11(15),17(22),18,20-nonaen-14-one | IC50 | 364 nM |
| 3-(2-hydroxyethyl)-20-(propan-2-yloxy)-3,13-diazahexacyclo[14.8.0.0^{2,10}.0^{4,9}.0^{11,15}.0^{17,22}]tetracosa-1(16),2(10),4(9),5,7,11(15),17(22),18,20-nonaen-14-one | IC50 | 1060 nM |
| N-[4-({4-[(3-methyl-1H-pyrazol-5-yl)amino]-6-(4-methylpiperazin-1-yl)pyrimidin-2-yl}sulfanyl)phenyl]cyclopropanecarboxamide | KD | 1100 nM |
| 3-(2-hydroxyethyl)-20-methoxy-3,13-diazahexacyclo[14.8.0.0^{2,10}.0^{4,9}.0^{11,15}.0^{17,22}]tetracosa-1(16),2(10),4(9),5,7,11(15),17(22),18,20-nonaen-14-one | IC50 | 1270 nM |
| 3-thia-13,23-diazahexacyclo[14.7.0.0^{2,10}.0^{4,9}.0^{11,15}.0^{17,22}]tricosa-1(16),2(10),4(9),5,7,11(15),17(22),18,20-nonaen-12-one | IC50 | 2090 nM |
| 3,13-diazahexacyclo[14.7.0.0^{2,10}.0^{4,9}.0^{11,15}.0^{17,22}]tricosa-1(16),2(10),4(9),5,7,11(15),17(22),18,20-nonaen-12-one | IC50 | 2660 nM |
| 5-({4-[(2,3-dimethyl-2H-indazol-6-yl)(methyl)amino]pyrimidin-2-yl}amino)-2-methylbenzene-1-sulfonamide | KD | 2900 nM |
| 3,13-diazahexacyclo[14.8.0.0^{2,10}.0^{4,9}.0^{11,15}.0^{17,22}]tetracosa-1(16),2(10),4(9),5,7,11(15),17(22),18,20-nonaen-12-one | IC50 | 3450 nM |
| 2-(2-chlorophenyl)-5,7-dihydroxy-8-[(3S)-3-hydroxy-1-methyl-4-piperidinyl]-1-benzopyran-4-one | KD | 5300 nM |
ChEMBL bioactivities
66 potent at pChembl≥5 of 67 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 9.10 | Ki | 0.7943 | nM | CHEMBL1993661 |
| 8.70 | IC50 | 2 | nM | CEP-1347 |
| 8.57 | IC50 | 2.69 | nM | STAUROSPORINE |
| 8.55 | IC50 | 2.84 | nM | STAUROSPORINE |
| 8.53 | IC50 | 2.93 | nM | STAUROSPORINE |
| 8.50 | Ki | 3.162 | nM | CHEMBL1980995 |
| 8.42 | Kd | 3.8 | nM | R-406 |
| 8.40 | Ki | 3.981 | nM | R-406 |
| 7.82 | Kd | 15 | nM | LESTAURTINIB |
| 7.80 | IC50 | 16 | nM | CHEMBL288817 |
| 7.70 | IC50 | 20 | nM | CHEMBL277817 |
| 7.55 | IC50 | 28 | nM | CHEMBL288229 |
| 7.38 | IC50 | 42 | nM | CHEMBL2436978 |
| 7.35 | IC50 | 45 | nM | CHEMBL416056 |
| 7.34 | IC50 | 46 | nM | CHEMBL4218417 |
| 7.30 | IC50 | 50 | nM | CHEMBL4281823 |
| 7.29 | IC50 | 51 | nM | CEP-1347 |
| 7.28 | Kd | 52 | nM | STAUROSPORINE |
| 7.10 | Ki | 79.43 | nM | CHEMBL1991674 |
| 7.05 | IC50 | 89 | nM | CHEMBL288816 |
| 7.00 | Ki | 100 | nM | CHEMBL1972346 |
| 6.90 | Ki | 125.9 | nM | CHEMBL1974328 |
| 6.90 | Ki | 125.9 | nM | CHEMBL592030 |
| 6.85 | IC50 | 140 | nM | CHEMBL36891 |
| 6.70 | Ki | 199.5 | nM | PF-00562271 |
| 6.50 | Ki | 316.2 | nM | CHEMBL458997 |
| 6.47 | IC50 | 339 | nM | CHEMBL386636 |
| 6.44 | IC50 | 364 | nM | CHEMBL357490 |
| 6.40 | Ki | 398.1 | nM | TOZASERTIB |
| 6.34 | IC50 | 452 | nM | CHEMBL2171124 |
| 6.28 | Kd | 530 | nM | FORETINIB |
| 6.24 | IC50 | 580 | nM | STAUROSPORINE |
| 6.20 | IC50 | 627 | nM | CHEMBL29709 |
| 6.20 | Ki | 631 | nM | CHEMBL1998953 |
| 6.12 | IC50 | 767 | nM | CHEMBL3393333 |
| 6.10 | Kd | 790 | nM | MIDOSTAURIN |
| 5.96 | Kd | 1100 | nM | TAE-684 |
| 5.82 | Kd | 1500 | nM | KW-2449 |
| 5.80 | IC50 | 1582 | nM | CHEMBL460989 |
| 5.80 | Ki | 1585 | nM | CHEMBL1982753 |
| 5.80 | Ki | 1585 | nM | DOVITINIB |
| 5.75 | Kd | 1800 | nM | TOZASERTIB |
| 5.73 | IC50 | 1855 | nM | CHEMBL460990 |
| 5.68 | IC50 | 2088 | nM | CHEMBL221536 |
| 5.68 | Kd | 2100 | nM | PAZOPANIB |
| 5.64 | Kd | 2300 | nM | NINTEDANIB |
| 5.60 | Ki | 2512 | nM | DASATINIB |
| 5.57 | IC50 | 2664 | nM | CHEMBL148471 |
| 5.50 | Ki | 3162 | nM | CHEMBL1990496 |
| 5.46 | IC50 | 3447 | nM | CHEMBL374581 |
PubChem BioAssay actives
59 with measured affinity, of 330 total; 39 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| methyl (15S,16R,18R)-10,23-bis(ethylsulfanylmethyl)-16-hydroxy-15-methyl-3-oxo-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8(13),9,11,20(25),21,23,26-nonaene-16-carboxylate | 775351: Inhibition of MLK2 (unknown origin) after 20 mins in presence of [33P]-ATP | ic50 | 0.0020 | uM |
| (2S,3R,4R,6R)-3-methoxy-2-methyl-4-(methylamino)-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-16-one | 1531778: Inhibition of human MLK2 using MBP as substrate by [gamma-33P]-ATP assay | ic50 | 0.0027 | uM |
| 6-[[5-fluoro-2-(3,4,5-trimethoxyanilino)pyrimidin-4-yl]amino]-2,2-dimethyl-4H-pyrido[3,2-b][1,4]oxazin-3-one | 624867: Binding constant for MLK2 kinase domain | kd | 0.0038 | uM |
| (15S,16S,18R)-16-hydroxy-16-(hydroxymethyl)-15-methyl-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8,10,12,20,22,24,26-nonaen-3-one | 507627: Binding affinity to MLK2 | kd | 0.0150 | uM |
| methyl (15S,16R,18R)-16-hydroxy-10,23-bis(methoxymethyl)-15-methyl-3-oxo-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8(13),9,11,20(25),21,23,26-nonaene-16-carboxylate | 125160: Inhibition of Mixed lineage kinase 2(MLK2) | ic50 | 0.0160 | uM |
| methyl (15S,16R,18R)-10,23-bis(ethoxymethyl)-16-hydroxy-15-methyl-3-oxo-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8(13),9,11,20(25),21,23,26-nonaene-16-carboxylate | 125160: Inhibition of Mixed lineage kinase 2(MLK2) | ic50 | 0.0200 | uM |
| methyl (15S,16R,18R)-10-(ethylsulfanylmethyl)-16-hydroxy-15-methyl-3-oxo-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8(13),9,11,20,22,24,26-nonaene-16-carboxylate | 125160: Inhibition of Mixed lineage kinase 2(MLK2) | ic50 | 0.0280 | uM |
| 3-(1H-indol-5-yl)-5-[4-[(4-methylpiperazin-1-yl)methyl]phenyl]-1H-pyrrolo[2,3-b]pyridine | 775427: Inhibition of MLK2 (unknown origin) | ic50 | 0.0420 | uM |
| methyl (15S,16R,18R)-16-hydroxy-15-methyl-3-oxo-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8,10,12,20,22,24,26-nonaene-16-carboxylate | 1797180: Mixed-Lineage Kinase Assays from Article 10.1021/jm051074u: “Synthesis and mixed lineage kinase activity of pyrrolocarbazole and isoindolone analogs of (+)K-252a.” | ic50 | 0.0450 | uM |
| methyl (15R,16S,18S)-16-hydroxy-15-methyl-3-oxo-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8,10,12,20,22,24,26-nonaene-16-carboxylate | 277638: Inhibition of GST-MLK2 | ic50 | 0.0450 | uM |
| 3-(2-hydroxyethyl)-7-(propan-2-yloxymethyl)-3,13,23-triazahexacyclo[14.7.0.02,10.04,9.011,15.017,22]tricosa-1,4(9),5,7,10,15,17,19,21-nonaen-12-one | 1384626: Inhibition of recombinant GST-tagged full length human MLK2 KD/LZ expressed in baculovirus using myelin basic protein as substrate preincubated for 15 mins measured after 30 mins in presence of [gamma-32P]ATP by scintillation counting | ic50 | 0.0460 | uM |
| 1-[5-(4-amino-7-ethylpyrrolo[2,3-d]pyrimidin-5-yl)-2,3-dihydroindol-1-yl]-2-[3-(trifluoromethoxy)phenyl]ethanone | 1415194: Inhibition of recombinant human MLK2 (1 to 449 residues) using myelin basic protein as substrate after 40 mins in presence of [gamma-33P]-ATP by scintillation counting analysis | ic50 | 0.0500 | uM |
| methyl (15S,16R,18R)-16-hydroxy-15-methyl-3-oxo-10,23-bis(propan-2-ylsulfanylmethyl)-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8(13),9,11,20(25),21,23,26-nonaene-16-carboxylate | 125160: Inhibition of Mixed lineage kinase 2(MLK2) | ic50 | 0.0890 | uM |
| methyl (15S,16R,18R)-23-(ethylsulfanylmethyl)-16-hydroxy-15-methyl-3-oxo-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8,10,12,20(25),21,23,26-nonaene-16-carboxylate | 125160: Inhibition of Mixed lineage kinase 2(MLK2) | ic50 | 0.1400 | uM |
| 3,13-diazahexacyclo[14.8.0.02,10.04,9.011,15.017,22]tetracosa-1(16),2(10),4,6,8,11(15),17,19,21-nonaene-12,14-dione | 1797180: Mixed-Lineage Kinase Assays from Article 10.1021/jm051074u: “Synthesis and mixed lineage kinase activity of pyrrolocarbazole and isoindolone analogs of (+)K-252a.” | ic50 | 0.3390 | uM |
| 3,13-diazahexacyclo[14.7.0.02,10.04,9.011,15.017,22]tricosa-1(16),2(10),4,6,8,11(15),17,19,21-nonaen-14-one | 1797180: Mixed-Lineage Kinase Assays from Article 10.1021/jm051074u: “Synthesis and mixed lineage kinase activity of pyrrolocarbazole and isoindolone analogs of (+)K-252a.” | ic50 | 0.3640 | uM |
| 1-[5-(4-amino-7-methylpyrrolo[2,3-d]pyrimidin-5-yl)-2,3-dihydroindol-1-yl]-2-[3-(trifluoromethyl)phenyl]ethanone | 702101: Inhibition of MLK2 | ic50 | 0.4520 | uM |
| 1-N’-[3-fluoro-4-[6-methoxy-7-(3-morpholin-4-ylpropoxy)quinolin-4-yl]oxyphenyl]-1-N-(4-fluorophenyl)cyclopropane-1,1-dicarboxamide | 624867: Binding constant for MLK2 kinase domain | kd | 0.5300 | uM |
| methyl (15S,16R,18R)-10,23-bis(butylsulfanylmethyl)-16-hydroxy-15-methyl-3-oxo-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8(13),9,11,20(25),21,23,26-nonaene-16-carboxylate | 125160: Inhibition of Mixed lineage kinase 2(MLK2) | ic50 | 0.6270 | uM |
| 2-[[6-(3,3-difluoropyrrolidin-1-yl)-4-[1-(oxetan-3-yl)piperidin-4-yl]-2-pyridinyl]amino]pyridine-4-carbonitrile | 1189388: Inhibition of MLK2 (unknown origin) | ic50 | 0.7670 | uM |
| Midostaurin | 435432: Binding constant for MLK2 kinase domain | kd | 0.7900 | uM |
| 5-chloro-2-N-[2-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidin-1-yl]phenyl]-4-N-(2-propan-2-ylsulfonylphenyl)pyrimidine-2,4-diamine | 624867: Binding constant for MLK2 kinase domain | kd | 1.1000 | uM |
| [4-[(E)-2-(1H-indazol-3-yl)ethenyl]phenyl]-piperazin-1-ylmethanone | 624867: Binding constant for MLK2 kinase domain | kd | 1.5000 | uM |
| 3-(2-hydroxyethyl)-20-methoxy-3,13-diazahexacyclo[14.8.0.02,10.04,9.011,15.017,22]tetracosa-1(16),2(10),4,6,8,11(15),17(22),18,20-nonaen-14-one | 1798485: Mixed-Lineage Kinase Assay from Article 10.1021/jm8005838: “Mixed-lineage kinase 1 and mixed-lineage kinase 3 subtype-selective dihydronaphthyl[3,4-a]pyrrolo[3,4-c]carbazole-5-ones: optimization, mixed-lineage kinase 1 crystallography, and oral in vivo activity in 1-methyl-4-phenyltetrahydropyridine models.” | ic50 | 1.5820 | uM |
| N-[4-[4-(4-methylpiperazin-1-yl)-6-[(5-methyl-1H-pyrazol-3-yl)amino]pyrimidin-2-yl]sulfanylphenyl]cyclopropanecarboxamide | 435432: Binding constant for MLK2 kinase domain | kd | 1.8000 | uM |
| 3-(2-hydroxyethyl)-20-propan-2-yloxy-3,13-diazahexacyclo[14.8.0.02,10.04,9.011,15.017,22]tetracosa-1(16),2(10),4,6,8,11(15),17(22),18,20-nonaen-14-one | 1798485: Mixed-Lineage Kinase Assay from Article 10.1021/jm8005838: “Mixed-lineage kinase 1 and mixed-lineage kinase 3 subtype-selective dihydronaphthyl[3,4-a]pyrrolo[3,4-c]carbazole-5-ones: optimization, mixed-lineage kinase 1 crystallography, and oral in vivo activity in 1-methyl-4-phenyltetrahydropyridine models.” | ic50 | 1.8550 | uM |
| 3-thia-13,23-diazahexacyclo[14.7.0.02,10.04,9.011,15.017,22]tricosa-1,4,6,8,10,15,17,19,21-nonaen-12-one | 1797180: Mixed-Lineage Kinase Assays from Article 10.1021/jm051074u: “Synthesis and mixed lineage kinase activity of pyrrolocarbazole and isoindolone analogs of (+)K-252a.” | ic50 | 2.0880 | uM |
| Pazopanib | 435432: Binding constant for MLK2 kinase domain | kd | 2.1000 | uM |
| methyl 2-hydroxy-3-[N-[4-[methyl-[2-(4-methylpiperazin-1-yl)acetyl]amino]phenyl]-C-phenylcarbonimidoyl]-1H-indole-6-carboxylate | 624867: Binding constant for MLK2 kinase domain | kd | 2.3000 | uM |
| 3,13-diazahexacyclo[14.7.0.02,10.04,9.011,15.017,22]tricosa-1(16),2(10),4,6,8,11(15),17,19,21-nonaen-12-one | 1797180: Mixed-Lineage Kinase Assays from Article 10.1021/jm051074u: “Synthesis and mixed lineage kinase activity of pyrrolocarbazole and isoindolone analogs of (+)K-252a.” | ic50 | 2.6640 | uM |
| 3,13-diazahexacyclo[14.8.0.02,10.04,9.011,15.017,22]tetracosa-1(16),2(10),4,6,8,11(15),17,19,21-nonaen-12-one | 1797180: Mixed-Lineage Kinase Assays from Article 10.1021/jm051074u: “Synthesis and mixed lineage kinase activity of pyrrolocarbazole and isoindolone analogs of (+)K-252a.” | ic50 | 3.4470 | uM |
| 5,5-dimethyl-8-[[4-(2,2,2-trifluoroethylamino)furo[3,2-d]pyrimidin-2-yl]amino]-1H-4,1-benzoxazepin-2-one | 1440135: Inhibition of MAP3K10 (unknown origin) after 60 mins by TR-FRET assay | ic50 | 4.5500 | uM |
| Neratinib | 624867: Binding constant for MLK2 kinase domain | kd | 4.6000 | uM |
| 5-[1-(cyclopropylmethyl)-5-[(1R,5S)-3-(oxetan-3-yl)-3-azabicyclo[3.1.0]hexan-6-yl]pyrazol-3-yl]-3-(trifluoromethyl)pyridin-2-amine | 1491962: Inhibition of recombinant human full length GST-tagged MLK2 expressed in baculovirus expression system by FRET assay | ic50 | 5.1500 | uM |
| 2-(2-chlorophenyl)-5,7-dihydroxy-8-[(3S,4R)-3-hydroxy-1-methylpiperidin-4-yl]chromen-4-one | 435432: Binding constant for MLK2 kinase domain | kd | 5.2000 | uM |
| 6-(2,6-dichlorophenyl)-8-methyl-2-(3-methylsulfanylanilino)pyrido[2,3-d]pyrimidin-7-one | 624867: Binding constant for MLK2 kinase domain | kd | 5.3000 | uM |
| Fedratinib | 624867: Binding constant for MLK2 kinase domain | kd | 6.9000 | uM |
| 5-[5-[(1R,5S)-3-(oxetan-3-yl)-3-azabicyclo[3.1.0]hexan-6-yl]-1-propan-2-ylpyrazol-3-yl]-3-(trifluoromethoxy)pyridin-2-amine | 1491962: Inhibition of recombinant human full length GST-tagged MLK2 expressed in baculovirus expression system by FRET assay | ic50 | 7.8800 | uM |
| N-[(2S,3R,4R,6R,18S)-18-hydroxy-3-methoxy-2-methyl-16-oxo-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-4-yl]-N-methylbenzamide | 507627: Binding affinity to MLK2 | kd | 8.9000 | uM |
CTD chemical–gene interactions
27 total (human), top 27 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Air Pollutants | increases abundance, increases expression | 2 |
| Particulate Matter | increases expression, increases abundance | 2 |
| aristolochic acid I | increases expression | 1 |
| arsenite | increases methylation | 1 |
| methylparaben | increases expression | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | increases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| 2-palmitoylglycerol | increases expression | 1 |
| abrine | increases expression | 1 |
| bisphenol S | affects cotreatment, decreases expression | 1 |
| (+)-JQ1 compound | decreases expression | 1 |
| Sunitinib | increases expression | 1 |
| Atrazine | decreases expression | 1 |
| Benzo(a)pyrene | decreases methylation | 1 |
| Calcitriol | increases expression, affects cotreatment | 1 |
| Dichlorodiphenyl Dichloroethylene | decreases expression | 1 |
| Dexamethasone | affects cotreatment, decreases expression | 1 |
| Doxorubicin | decreases expression | 1 |
| Indomethacin | affects cotreatment, decreases expression | 1 |
| Lead | affects expression | 1 |
| Silicon Dioxide | increases expression | 1 |
| Smoke | decreases expression | 1 |
| Testosterone | affects cotreatment, increases expression | 1 |
| Tobacco Smoke Pollution | increases expression | 1 |
| 1-Methyl-3-isobutylxanthine | affects cotreatment, decreases expression | 1 |
| Asbestos, Crocidolite | affects expression | 1 |
| Acrylamide | decreases expression | 1 |
ChEMBL screening assays
174 unique, capped per target: 173 binding, 1 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1000437 | Binding | Inhibition of human MLK2 expressed in baculovirus insect cell system | Mixed-lineage kinase 1 and mixed-lineage kinase 3 subtype-selective dihydronaphthyl[3,4-a]pyrrolo[3,4-c]carbazole-5-ones: optimization, mixed-lineage kinase 1 crystallography, and oral in vivo activity in 1-methyl-4-phenyltetrahydropyridine models. — J Med Chem |
| CHEMBL1964110 | Functional | PUBCHEM_BIOASSAY: Navigating the Kinome. (Class of assay: other) Panel member name: MAP3K10 | PubChem BioAssay data set |
Cellosaurus cell lines
4 cell lines: 3 cancer cell line, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B3AK | Abcam HEK293T MAP3K10 KO | Transformed cell line | Female |
| CVCL_SW55 | HAP1 MAP3K10 (-) 1 | Cancer cell line | Male |
| CVCL_SW56 | HAP1 MAP3K10 (-) 2 | Cancer cell line | Male |
| CVCL_SW57 | HAP1 MAP3K10 (-) 3 | Cancer cell line | Male |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Targeted by drugs: CEP-1347