MAP9-AS1

Summary

MAP9-AS1 (MAP9 antisense RNA 1, HGNC:56110) is a long non-coding RNA gene on chromosome 4q32.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56110
Approved symbol	MAP9-AS1
Name	MAP9 antisense RNA 1
Location	4q32.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000250910
Ensembl biotype	lncRNA
Entrez	102724776
RNAcentral	URS00005D5F7B — lncRNA, 449 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 45 — 45 lncRNA

ENST00000417474, ENST00000508191, ENST00000512269, ENST00000593387, ENST00000593486, ENST00000594492, ENST00000594666, ENST00000595229, ENST00000595760, ENST00000596165, ENST00000596754, ENST00000597831, ENST00000597939, ENST00000597955, ENST00000598252, ENST00000598890, ENST00000599555, ENST00000600928, ENST00000601977, ENST00000602249, ENST00000608092, ENST00000608406, ENST00000608463, ENST00000608544, ENST00000608762, ENST00000609254, ENST00000609486, ENST00000609716, ENST00000610249, ENST00000615177, ENST00000616083, ENST00000616339, ENST00000618478, ENST00000618537, ENST00000620130, ENST00000621683, ENST00000629939, ENST00000630664, ENST00000652141, ENST00000832744, ENST00000832745, ENST00000832746, ENST00000832747, ENST00000832748, ENST00000832749

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000417474 — 4 exons

Exon	Start	End
ENSE00001720520	155357089	155357202
ENSE00003084236	155360285	155360465
ENSE00003150831	155354209	155354373
ENSE00004248526	155304956	155305091

Expression profiles

Bgee: expression breadth ubiquitous, 128 present calls, max score 85.66.

Top tissues by expression

128 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.66	gold quality
bone marrow cell	CL:0002092	84.68	gold quality
right testis	UBERON:0004534	83.67	gold quality
left testis	UBERON:0004533	83.65	gold quality
testis	UBERON:0000473	83.34	gold quality
sural nerve	UBERON:0015488	75.56	gold quality
cortical plate	UBERON:0005343	74.27	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	73.53	gold quality
corpus callosum	UBERON:0002336	71.76	gold quality
ganglionic eminence	UBERON:0004023	69.83	gold quality
colonic epithelium	UBERON:0000397	68.34	silver quality
ventricular zone	UBERON:0003053	65.41	gold quality
adrenal tissue	UBERON:0018303	64.86	gold quality
stromal cell of endometrium	CL:0002255	62.65	gold quality
skeletal muscle tissue	UBERON:0001134	62.45	gold quality
right uterine tube	UBERON:0001302	61.86	gold quality
endometrium	UBERON:0001295	61.71	gold quality
superior frontal gyrus	UBERON:0002661	61.45	gold quality
bone marrow	UBERON:0002371	61.39	gold quality
prefrontal cortex	UBERON:0000451	60.24	gold quality
gall bladder	UBERON:0002110	59.83	gold quality
muscle tissue	UBERON:0002385	59.57	gold quality
lymph node	UBERON:0000029	59.24	gold quality
leukocyte	CL:0000738	57.37	gold quality
monocyte	CL:0000576	57.20	gold quality
islet of Langerhans	UBERON:0000006	57.05	gold quality
kidney	UBERON:0002113	56.90	gold quality
hindlimb stylopod muscle	UBERON:0004252	56.50	silver quality
pancreas	UBERON:0001264	56.00	gold quality
frontal cortex	UBERON:0001870	55.67	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	5.54

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.