MARCHF11-DT

Summary

MARCHF11-DT (MARCHF11 divergent transcript, HGNC:55550) is a long non-coding RNA gene on chromosome 5p15.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55550
Approved symbol	MARCHF11-DT
Name	MARCHF11 divergent transcript
Location	5p15.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000250448
Ensembl biotype	lncRNA
Entrez	401176
RNAcentral	URS0000BC441A — lncRNA, 3539 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 19 — 19 lncRNA

ENST00000509037, ENST00000757949, ENST00000757950, ENST00000757951, ENST00000757952, ENST00000757953, ENST00000757954, ENST00000757955, ENST00000757956, ENST00000757957, ENST00000757958, ENST00000757959, ENST00000757960, ENST00000757961, ENST00000757962, ENST00000757963, ENST00000757964, ENST00000757965, ENST00000757966

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000509037 — 2 exons

Exon	Start	End
ENSE00002056547	16180238	16180440
ENSE00002078649	16183723	16185585

Expression profiles

Bgee: expression breadth broad, 54 present calls, max score 82.65.

Top tissues by expression

176 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	82.65	gold quality
sperm	CL:0000019	76.70	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	69.08	gold quality
buccal mucosa cell	CL:0002336	68.47	gold quality
endothelial cell	CL:0000115	66.56	gold quality
bone marrow	UBERON:0002371	59.63	gold quality
nasal cavity epithelium	UBERON:0005384	59.13	gold quality
trabecular bone tissue	UBERON:0002483	59.09	gold quality
amniotic fluid	UBERON:0000173	59.01	gold quality
ventricular zone	UBERON:0003053	58.20	silver quality
cartilage tissue	UBERON:0002418	57.07	gold quality
left testis	UBERON:0004533	57.01	gold quality
heart right ventricle	UBERON:0002080	56.84	gold quality
cortical plate	UBERON:0005343	56.55	silver quality
trachea	UBERON:0003126	56.37	gold quality
testis	UBERON:0000473	56.08	gold quality
lower lobe of lung	UBERON:0008949	56.05	silver quality
upper lobe of lung	UBERON:0008948	55.98	silver quality
right testis	UBERON:0004534	55.67	gold quality
seminal vesicle	UBERON:0000998	55.58	gold quality
nasal cavity mucosa	UBERON:0001826	55.57	gold quality
cerebellar vermis	UBERON:0004720	55.42	gold quality
cortex of kidney	UBERON:0001225	55.29	gold quality
tendon of biceps brachii	UBERON:0008188	54.90	gold quality
substantia nigra pars reticulata	UBERON:0001966	54.76	gold quality
parotid gland	UBERON:0001831	54.69	gold quality
bronchial epithelial cell	CL:0002328	54.52	gold quality
bronchus	UBERON:0002185	54.46	gold quality
pigmented layer of retina	UBERON:0001782	54.40	gold quality
inferior vagus X ganglion	UBERON:0005363	54.37	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.