MATK
gene geneOn this page
Also known as HYLTKCTKHYLLskCHKHHYLTKDKFZp434N1212MGC1708MGC2101
Summary
MATK (megakaryocyte-associated tyrosine kinase, HGNC:6906) is a protein-coding gene on chromosome 19p13.3, encoding Megakaryocyte-associated tyrosine-protein kinase (P42679). Could play a significant role in the signal transduction of hematopoietic cells.
The protein encoded by this gene has amino acid sequence similarity to Csk tyrosine kinase and has the structural features of the CSK subfamily: SRC homology SH2 and SH3 domains, a catalytic domain, a unique N terminus, lack of myristylation signals, lack of a negative regulatory phosphorylation site, and lack of an autophosphorylation site. This protein is thought to play a significant role in the signal transduction of hematopoietic cells. It is able to phosphorylate and inactivate Src family kinases, and may play an inhibitory role in the control of T-cell proliferation. This protein might be involved in signaling in some cases of breast cancer. Three alternatively spliced transcript variants that encode different isoforms have been described for this gene.
Source: NCBI Gene 4145 — RefSeq curated summary.
At a glance
- GWAS associations: 1
- Clinical variants (ClinVar): 75 total
- GTEx eGene: eQTL in 26 tissues, sQTL in 7 (q < 0.05)
- ChEMBL bioactivity: 10 clinical-phase molecules tested; no curated mechanism-of-action drug
- Constraint (gnomAD): pLI 0.00 (LoF-tolerant), LOEUF 0.92 (unconstrained)
- MANE Select transcript:
NM_139355 - Notable: 75 clinical variants but no curated precision-oncology (CIViC) evidence yet
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:6906 |
| Approved symbol | MATK |
| Name | megakaryocyte-associated tyrosine kinase |
| Location | 19p13.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | HYLTK, CTK, HYL, Lsk, CHK, HHYLTK, DKFZp434N1212, MGC1708, MGC2101 |
| Ensembl gene | ENSG00000007264 |
| Ensembl biotype | protein_coding |
| OMIM | 600038 |
| Entrez | 4145 |
Gene structure
Transcript identifiers
Ensembl transcripts: 33 — 26 protein_coding, 4 nonsense_mediated_decay, 3 protein_coding_CDS_not_defined
MANE Select: ENST00000310132
Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 3, TSL 2: 2, TSL 3: 3, TSL 4: 6, TSL 5: 1
ENST00000310132, ENST00000395040, ENST00000395045, ENST00000585778, ENST00000587180, ENST00000588983, ENST00000590028, ENST00000590493, ENST00000590821, ENST00000590849, ENST00000590980, ENST00000591059, ENST00000592300, ENST00000592612, ENST00000619596, ENST00000874393, ENST00000874394, ENST00000874395, ENST00000874396, ENST00000874397, ENST00000874398, ENST00000923599, ENST00000923600, ENST00000923601, ENST00000923602, ENST00000923603, ENST00000923604, ENST00001004463, ENST00001029939, ENST00001079958, ENST00001079959, ENST00001079960, ENST00001135118
RefSeq mRNA: 6 — MANE Select: NM_139355
NM_001440577, NM_001440578, NM_001440579, NM_002378, NM_139354, NM_139355
CCDS: CCDS12113, CCDS12114, CCDS42468
Canonical transcript exons
ENST00000310132 — 14 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000664298 | 3783814 | 3784033 |
| ENSE00000875993 | 3784338 | 3784451 |
| ENSE00000875996 | 3783126 | 3783219 |
| ENSE00000875997 | 3781607 | 3781672 |
| ENSE00000875998 | 3779698 | 3779797 |
| ENSE00000875999 | 3779533 | 3779617 |
| ENSE00000876002 | 3779378 | 3779451 |
| ENSE00000876003 | 3778992 | 3779187 |
| ENSE00000951594 | 3778509 | 3778595 |
| ENSE00002307506 | 3785064 | 3785286 |
| ENSE00002770053 | 3786169 | 3786381 |
| ENSE00002801673 | 3777973 | 3778422 |
| ENSE00003480927 | 3784825 | 3784884 |
| ENSE00003690443 | 3784124 | 3784239 |
Expression profiles
Bgee: expression breadth ubiquitous, 229 present calls, max score 97.80.
FANTOM5 (CAGE): breadth broad, TPM avg 7.6433 / max 313.2340, expressed in 754 samples.
Highest expression (Bgee): granulocyte, cingulate cortex, anterior cingulate cortex, frontal lobe, amygdala.
Genetic regulation across tissues (GTEx eQTL / sQTL)
MATK is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 26 tissues and its splicing (sQTL) in 7 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.
showing 20 of 33 significant tissue × QTL associations:
| Tissue | QTL | q-value | Slope | Lead variant |
|---|---|---|---|---|
| Nerve Tibial | eqtl | 3.6e-31 | +0.85 | 19:3812468:C:G |
| Esophagus Mucosa | eqtl | 1.9e-25 | +1.79 | 19:3785265:C:T |
| Cells Cultured fibroblasts | eqtl | 4.5e-12 | +1.06 | 19:3786599:C:T |
| Esophagus Muscularis | eqtl | 2.2e-11 | +0.58 | 19:3812468:C:G |
| Stomach | eqtl | 1.1e-09 | +0.46 | 19:3812468:C:G |
| Artery Aorta | eqtl | 1.4e-09 | +0.51 | 19:3812468:C:G |
| Adipose Visceral Omentum | eqtl | 2.2e-09 | +0.51 | 19:3812468:C:G |
| Lung | eqtl | 1.9e-08 | +0.45 | 19:3812468:C:G |
| Brain Cortex | sqtl | 4.6e-08 | +1.29 | 19:3778221:C:T |
| Thyroid | eqtl | 2.3e-07 | +0.42 | 19:3812091:A:G |
| Brain Caudate basal ganglia | sqtl | 1.6e-06 | +1.42 | 19:3793151:G:A |
| Skin Not Sun Exposed Suprapubic | eqtl | 1.9e-06 | +0.49 | 19:3801558:A:C |
| Esophagus Gastroesophageal Junction | eqtl | 1.9e-06 | +0.59 | 19:3812468:C:G |
| Prostate | eqtl | 6.0e-06 | +0.50 | 19:3812468:C:G |
| Spleen | eqtl | 7.9e-05 | +0.36 | 19:3812468:C:G |
| Whole Blood | eqtl | 1.1e-04 | +0.11 | 19:3812468:C:G |
| Skin Sun Exposed Lower leg | eqtl | 1.3e-04 | +0.44 | 19:3801558:A:C |
| Cells EBV-transformed lymphocytes | eqtl | 3.7e-04 | +0.43 | 19:3812468:C:G |
| Colon Transverse | eqtl | 4.1e-04 | +0.28 | 19:3812468:C:G |
| Spleen | sqtl | 1.7e-03 | -2.50 | 19:4250502:C:T |
FANTOM5 promoters
5 alternative TSS:
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 178338 | 4.5685 | 603 |
| 178339 | 1.7027 | 502 |
| 178337 | 0.9624 | 149 |
| 178336 | 0.2563 | 90 |
| 178340 | 0.1534 | 61 |
Top tissues by expression
showing 100 of 280 tissues by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| granulocyte | CL:0000094 | 97.80 | gold quality |
| cingulate cortex | UBERON:0003027 | 93.64 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 93.58 | gold quality |
| right frontal lobe | UBERON:0002810 | 93.18 | gold quality |
| amygdala | UBERON:0001876 | 91.67 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 91.67 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 91.67 | gold quality |
| prefrontal cortex | UBERON:0000451 | 91.51 | gold quality |
| nucleus accumbens | UBERON:0001882 | 90.65 | gold quality |
| frontal cortex | UBERON:0001870 | 89.76 | gold quality |
| putamen | UBERON:0001874 | 89.72 | gold quality |
| neocortex | UBERON:0001950 | 89.70 | gold quality |
| caudate nucleus | UBERON:0001873 | 89.49 | gold quality |
| cerebral cortex | UBERON:0000956 | 88.88 | gold quality |
| telencephalon | UBERON:0001893 | 88.65 | gold quality |
| Ammon’s horn | UBERON:0001954 | 88.16 | gold quality |
| cervix squamous epithelium | UBERON:0006922 | 87.25 | gold quality |
| temporal lobe | UBERON:0001871 | 87.22 | gold quality |
| blood | UBERON:0000178 | 87.15 | gold quality |
| forebrain | UBERON:0001890 | 86.39 | gold quality |
| Brodmann (1909) area 10 | UBERON:0013541 | 86.28 | gold quality |
| primary visual cortex | UBERON:0002436 | 86.09 | gold quality |
| occipital lobe | UBERON:0002021 | 84.67 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 84.53 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 84.18 | gold quality |
| brain | UBERON:0000955 | 83.41 | gold quality |
| Brodmann (1909) area 46 | UBERON:0006483 | 83.32 | gold quality |
| central nervous system | UBERON:0001017 | 83.11 | gold quality |
| postcentral gyrus | UBERON:0002581 | 83.05 | gold quality |
| parietal lobe | UBERON:0001872 | 82.79 | gold quality |
| hypothalamus | UBERON:0001898 | 82.63 | gold quality |
| spleen | UBERON:0002106 | 81.81 | gold quality |
| skeletal muscle tissue of rectus abdominis | UBERON:0004511 | 81.47 | gold quality |
| amniotic fluid | UBERON:0000173 | 81.02 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 80.98 | gold quality |
| entorhinal cortex | UBERON:0002728 | 80.93 | gold quality |
| pons | UBERON:0000988 | 80.25 | gold quality |
| cerebellar vermis | UBERON:0004720 | 80.18 | gold quality |
| cortical plate | UBERON:0005343 | 79.72 | gold quality |
| right uterine tube | UBERON:0001302 | 79.46 | gold quality |
| frontal pole | UBERON:0002795 | 79.12 | gold quality |
| right lung | UBERON:0002167 | 79.10 | gold quality |
| endometrium epithelium | UBERON:0004811 | 78.83 | gold quality |
| periodontal ligament | UBERON:0008266 | 78.64 | gold quality |
| bone marrow | UBERON:0002371 | 78.45 | gold quality |
| substantia nigra | UBERON:0002038 | 78.43 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 78.30 | gold quality |
| midbrain | UBERON:0001891 | 78.17 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 77.94 | gold quality |
| type B pancreatic cell | CL:0000169 | 77.91 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 77.84 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 77.81 | gold quality |
| olfactory bulb | UBERON:0002264 | 77.72 | gold quality |
| lymph node | UBERON:0000029 | 77.64 | gold quality |
| substantia nigra pars compacta | UBERON:0001965 | 77.04 | gold quality |
| upper lobe of lung | UBERON:0008948 | 76.88 | gold quality |
| bone element | UBERON:0001474 | 76.76 | gold quality |
| Brodmann (1909) area 23 | UBERON:0013554 | 76.73 | gold quality |
| tendon of biceps brachii | UBERON:0008188 | 76.69 | gold quality |
| upper arm skin | UBERON:0004263 | 76.68 | gold quality |
| triceps brachii | UBERON:0001509 | 76.64 | gold quality |
| lateral globus pallidus | UBERON:0002476 | 76.49 | gold quality |
| secondary oocyte | CL:0000655 | 76.36 | silver quality |
| oocyte | CL:0000023 | 76.32 | gold quality |
| orbitofrontal cortex | UBERON:0004167 | 75.92 | gold quality |
| gluteal muscle | UBERON:0002000 | 75.87 | gold quality |
| ventral tegmental area | UBERON:0002691 | 75.72 | silver quality |
| vena cava | UBERON:0004087 | 75.37 | gold quality |
| tongue squamous epithelium | UBERON:0006919 | 75.37 | gold quality |
| substantia nigra pars reticulata | UBERON:0001966 | 75.29 | silver quality |
| middle frontal gyrus | UBERON:0002702 | 75.09 | silver quality |
| inferior vagus X ganglion | UBERON:0005363 | 74.75 | silver quality |
| subthalamic nucleus | UBERON:0001906 | 74.61 | silver quality |
| thymus | UBERON:0002370 | 74.59 | silver quality |
| dorsal plus ventral thalamus | UBERON:0001897 | 74.57 | silver quality |
| body of tongue | UBERON:0011876 | 74.54 | silver quality |
| paraflocculus | UBERON:0005351 | 74.49 | gold quality |
| cardia of stomach | UBERON:0001162 | 74.29 | silver quality |
| medulla oblongata | UBERON:0001896 | 74.17 | silver quality |
| superior vestibular nucleus | UBERON:0007227 | 74.09 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 74.04 | gold quality |
| pericardium | UBERON:0002407 | 73.91 | silver quality |
| caecum | UBERON:0001153 | 73.87 | gold quality |
| spinal cord | UBERON:0002240 | 73.86 | gold quality |
| decidua | UBERON:0002450 | 73.85 | silver quality |
| parotid gland | UBERON:0001831 | 73.80 | gold quality |
| saphenous vein | UBERON:0007318 | 73.75 | silver quality |
| diaphragm | UBERON:0001103 | 73.64 | gold quality |
| trabecular bone tissue | UBERON:0002483 | 73.63 | silver quality |
| gall bladder | UBERON:0002110 | 73.59 | gold quality |
| duodenum | UBERON:0002114 | 73.56 | gold quality |
| lateral nuclear group of thalamus | UBERON:0002736 | 73.52 | silver quality |
| vastus lateralis | UBERON:0001379 | 73.50 | gold quality |
| pylorus | UBERON:0001166 | 73.41 | gold quality |
| globus pallidus | UBERON:0001875 | 73.38 | silver quality |
| nipple | UBERON:0002030 | 73.37 | silver quality |
| nasal cavity epithelium | UBERON:0005384 | 73.06 | gold quality |
| vermiform appendix | UBERON:0001154 | 73.03 | gold quality |
| gingival epithelium | UBERON:0001949 | 72.91 | gold quality |
| medial globus pallidus | UBERON:0002477 | 72.78 | silver quality |
Single-cell (SCXA)
Detected in 17 experiment(s), a significant marker in 16.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-CURD-84 | yes | 493.58 |
| E-HCAD-4 | yes | 112.88 |
| E-HCAD-1 | yes | 82.35 |
| E-CURD-122 | yes | 51.77 |
| E-MTAB-6701 | yes | 35.33 |
| E-MTAB-9467 | yes | 30.55 |
| E-MTAB-10287 | yes | 29.07 |
| E-HCAD-10 | yes | 28.68 |
| E-CURD-88 | yes | 20.11 |
| E-CURD-46 | yes | 18.42 |
| E-HCAD-9 | yes | 18.42 |
| E-MTAB-8410 | yes | 14.26 |
| E-MTAB-10553 | yes | 12.44 |
| E-CURD-112 | yes | 11.09 |
| E-MTAB-9067 | yes | 9.88 |
HPA expression
RNA tissue specificity: Tissue enhanced
showing 60 of 78 HPA tissues / cells by nTPM:
| Tissue / cell | Axis | nTPM | Protein (IHC) |
|---|---|---|---|
| Frontal cortex | tissue | 98.9 | |
| Caudate putamen | tissue | 88.5 | |
| Postcentral gyrus | tissue | 78.0 | |
| Hippocampus | tissue | 52.5 | not detected |
| Nucleus accumbens | tissue | 27.5 | |
| Bone marrow | tissue | 19.3 | medium |
| Prefrontal cortex | tissue | 19.0 | |
| Cerebral cortex | tissue | 19.0 | low |
| Motor cortex | tissue | 18.7 | |
| Hippocampal formation | tissue | 18.4 | |
| Retrosplenial and cingulate cortex | tissue | 18.1 | |
| Entorhinal cortex | tissue | 16.6 | |
| Retrosplenial cortex | tissue | 16.5 | |
| Somatosensory cortex | tissue | 16.2 | |
| Insular cortex | tissue | 15.8 | |
| Locus coeruleus | tissue | 15.4 | |
| Temporal cortex | tissue | 15.3 | |
| Amygdala | tissue | 13.4 | |
| Spleen | tissue | 13.4 | medium |
| Occipital cortex | tissue | 13.4 | |
| Hypothalamus | tissue | 11.4 | |
| Periaqueductal gray | tissue | 9.0 | |
| Lymph node | tissue | 8.8 | medium |
| Septum | tissue | 8.6 | |
| Pons | tissue | 8.3 | |
| Superior colliculi | tissue | 8.2 | |
| Thalamus | tissue | 7.0 | |
| Choroid plexus | tissue | 6.9 | |
| Midbrain | tissue | 6.8 | |
| Cerebellum | tissue | 6.8 | not detected |
| Duodenum | tissue | 6.2 | low |
| Appendix | tissue | 6.2 | medium |
| Small intestine | tissue | 5.8 | low |
| Lung | tissue | 5.7 | medium |
| Ventral forebrain | tissue | 5.6 | |
| Medulla oblongata | tissue | 5.5 | |
| Substantia nigra | tissue | 4.9 | |
| Gallbladder | tissue | 4.1 | low |
| Olfactory bulb | tissue | 4.1 | |
| Spinal cord | tissue | 4.0 | |
| Basal ganglia | tissue | 3.9 | low |
| Stomach 1 | tissue | 3.7 | medium |
| Tonsil | tissue | 3.7 | high |
| Fallopian tube | tissue | 3.7 | not detected |
| Putamen | tissue | 3.6 | |
| Thymus | tissue | 3.6 | |
| Salivary gland | tissue | 3.0 | medium |
| Pituitary gland | tissue | 2.4 | |
| Corpus callosum | tissue | 2.3 | |
| Liver | tissue | 2.2 | not detected |
| Retina | tissue | 2.0 | |
| Colon | tissue | 1.9 | medium |
| Breast | tissue | 1.8 | low |
| Testis | tissue | 1.7 | medium |
| Urinary bladder | tissue | 1.5 | not detected |
| Skin 1 | tissue | 1.3 | low |
| Heart muscle | tissue | 1.3 | low |
| Adipose tissue | tissue | 1.3 | low |
| Adrenal gland | tissue | 1.2 | low |
| Vagina | tissue | 1.1 | not detected |
Brain sub-regions (HPA Brain Atlas): detected in 190; highest nTPM — Precentral gyrus (90.6), Posterior cingulate cortex (67.6), Supplementary motor cortex (64.6), Postcentral gyrus, middle (61.0), Frontal eye field (60.8).
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): HIF1A
miRNA regulators (miRDB)
Targeting MATK by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).
5 miRNAs:
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-7155-5P | 98.65 | 66.14 | 1290 |
| HSA-MIR-637 | 97.91 | 64.05 | 1517 |
| HSA-MIR-2861 | 95.24 | 65.47 | 1056 |
| HSA-MIR-4800-3P | 88.42 | 63.07 | 35 |
| HSA-MIR-4750-5P | 80.79 | 59.79 | 18 |
Functional genomics
gnomAD constraint: pLI 2.28e-10, LOEUF 0.921, missense Z 1.44 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD
Regional missense constraint (gnomAD RMC): no regional variation along ENST00000310132 — one region, missense o/e 0.82.
Literature-anchored findings (GeneRIF, showing 14)
- ERBB2 binds to the SH2 domain of CHK and inhibits cell growth in human breast tumor cell lines (PMID:12122014)
- Overexpression of the Csk homologous kinase facilitates phosphorylation of akt/protein kinase b in breast neoplasms (PMID:12429987)
- CHK Leu223 stabilizes the movement of the alphaC-helix of the protein tyrosine kinase (PMID:12782282)
- Loss of CHK expression is associated with human brain tumors (PMID:15329911)
- Nuclear multi-lobulation in late S phase, which is dependent on polymerization and depolymerization of microtubules, may be involved in nuclear Chk-induced inhibition of proliferation. (PMID:15748901)
- striking functional differences between the Csk and Chk SH2 domains and revealed functional similarities between the Chk and Src SH2 domains (PMID:15890649)
- This study describes for the first time the Src-independent actions of CHK and provides novel insights into CHK function in neural cells. (PMID:16168623)
- Matk/CHK is not functionally redundant with Csk, and this tyrosine kinase plays an important role as a regulator of immunologic responses (PMID:16574955)
- Findings indicate that the importance of the N-terminal domain to Chk-induced tyrosine phosphorylation in the nucleus, and implicate that nuclear tyrosine-phosphorylated proteins may contribute to inhibition of cell proliferation. (PMID:16707123)
- Progesterone increases MATK in mast cells and reducs cell proliferation. (PMID:17492661)
- These results reveal a potentially important role for CHK in Src activation and tumorigenicity in colon cancer cells. (PMID:17934522)
- CHK is capable of inhibiting the CXCL12-CXCR4 pathway in neuroblastoma. (PMID:18292939)
- After IGF-I stimulation, CTK is recruited to IGF-IR and its recruitment facilitates CTK’s subsequent association with phospho-SHPS-1. (PMID:21799000)
- CSK-homologous kinase (CHK/MATK) is a potential colorectal cancer tumour suppressor gene epigenetically silenced by promoter methylation. (PMID:33767439)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | matk | ENSDARG00000074670 |
| mus_musculus | Matk | ENSMUSG00000004933 |
| rattus_norvegicus | Matk | ENSRNOG00000020431 |
Paralogs (32): FGR (ENSG00000000938), BTK (ENSG00000010671), FYN (ENSG00000010810), STYK1 (ENSG00000060140), TNK2 (ENSG00000061938), TXK (ENSG00000074966), JAK2 (ENSG00000096968), ABL1 (ENSG00000097007), PTK6 (ENSG00000101213), HCK (ENSG00000101336), BMX (ENSG00000102010), CSK (ENSG00000103653), TYK2 (ENSG00000105397), JAK3 (ENSG00000105639), FRK (ENSG00000111816), ITK (ENSG00000113263), ZAP70 (ENSG00000115085), PTK2B (ENSG00000120899), SRMS (ENSG00000125508), TEC (ENSG00000135605), BLK (ENSG00000136573), ABL2 (ENSG00000143322), FER (ENSG00000151422), JAK1 (ENSG00000162434), SYK (ENSG00000165025), PTK2 (ENSG00000169398), TNK1 (ENSG00000174292), YES1 (ENSG00000176105), FES (ENSG00000182511), LCK (ENSG00000182866), SRC (ENSG00000197122), LYN (ENSG00000254087)
Mouse-model phenotypes
Observed phenotypes of the mouse ortholog (MGI:99259) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 3 distinct phenotype terms.
| Mouse phenotype (MP) | Records |
|---|---|
| abnormal hematopoietic system physiology | 1 |
| abnormal bone marrow cell morphology/development | 1 |
| increased hematopoietic stem cell number | 1 |
Additional cross-species homologs
Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.
| Organism | UniProt | Identity | Method |
|---|---|---|---|
| Gallus gallus | P00523 | 100.0% | Diamond |
| Pongo abelii | Q5RFL3 | 99.8% | Diamond |
| Bos taurus | A0JNB0 | 99.6% | Diamond |
| Sus scrofa | A1Y2K1 | 99.4% | Diamond |
| Pan troglodytes | P0C0K6 | 99.3% | Diamond |
| Felis catus | P14238 | 98.7% | Diamond |
| Aotus nancymaae | Q5PXS1 | 98.4% | Diamond |
| Xenopus laevis | P13115 | 97.9% | Diamond |
| Macaca fascicularis | Q95M30 | 97.8% | Diamond |
| Saimiri sciureus | Q95KR7 | 96.9% | Diamond |
| Canis lupus familiaris | Q9TTY2 | 95.6% | Diamond |
| Xiphophorus hellerii | P27446 | 94.4% | Diamond |
| Avian sarcoma virus PR2257 | P15054 | 100.0% | Diamond |
| Avian sarcoma virus S2 | P14085 | 99.8% | Diamond |
| Avian sarcoma virus S1 | P14084 | 99.6% | Diamond |
| Gardner-Arnstein feline sarcoma virus | P00542 | 99.1% | Diamond |
| Snyder-Theilen feline sarcoma virus | P00543 | 99.1% | Diamond |
| Rous sarcoma virus (strain Schmidt-Ruppin A) | P00524 | 99.0% | Diamond |
| Avian sarcoma virus RASV1441 | P00525 | 99.0% | Diamond |
| Rous sarcoma virus - Prague C | P00526 | 99.0% | Diamond |
| Rous sarcoma virus (strain H-19) | P25020 | 99.0% | Diamond |
| Rous sarcoma virus (strain Schmidt-Ruppin E) | P63185 | 99.0% | Diamond |
| Y73 sarcoma virus | P00527 | 98.9% | Diamond |
| Rous sarcoma virus (strain PA101T) | P31693 | 95.6% | Diamond |
Genomic neighbors (locus context)
Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).
| Symbol | Type | Entrez |
|---|---|---|
| ZFR2 | protein-coding | 23217 |
| NMRK2 | protein-coding | 27231 |
| ATCAY | protein-coding | 85300 |
| TJP3 | protein-coding | 27134 |
| RAX2 | protein-coding | 84839 |
| APBA3 | protein-coding | 9546 |
| MRPL54 | protein-coding | 116541 |
| PIP5K1C | protein-coding | 23396 |
Protein
Protein identifiers
Megakaryocyte-associated tyrosine-protein kinase — P42679 (reviewed: P42679)
Alternative names: CSK homologous kinase, Hematopoietic consensus tyrosine-lacking kinase, Protein kinase HYL, Tyrosine-protein kinase CTK
All UniProt accessions (10): P42679, F1T0G6, K7EKC4, K7EKS5, K7ENL8, K7EPP2, K7EQV3, K7EQY5, K7ERY4, K7ES68
UniProt curated annotations — full annotation on UniProt →
Function. Could play a significant role in the signal transduction of hematopoietic cells. May regulate tyrosine kinase activity of SRC-family members in brain by specifically phosphorylating their C-terminal regulatory tyrosine residue which acts as a negative regulatory site. It may play an inhibitory role in the control of T-cell proliferation.
Subunit / interactions. Interacts with KIT.
Subcellular location. Cytoplasm. Membrane.
Tissue specificity. Expressed in various myeloid cell lines, detected in brain and lung.
Similarity. Belongs to the protein kinase superfamily. Tyr protein kinase family. CSK subfamily.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P42679-1 | 1 | yes |
| P42679-2 | 2 | |
| P42679-3 | 3 |
RefSeq proteins (6): NP_001427506, NP_001427507, NP_001427508, NP_002369, NP_647611, NP_647612* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000719 | Prot_kinase_dom | Domain |
| IPR000980 | SH2 | Domain |
| IPR001245 | Ser-Thr/Tyr_kinase_cat_dom | Domain |
| IPR001452 | SH3_domain | Domain |
| IPR008266 | Tyr_kinase_AS | Active_site |
| IPR011009 | Kinase-like_dom_sf | Homologous_superfamily |
| IPR017441 | Protein_kinase_ATP_BS | Binding_site |
| IPR020635 | Tyr_kinase_cat_dom | Domain |
| IPR035027 | Csk-like_SH2 | Domain |
| IPR036028 | SH3-like_dom_sf | Homologous_superfamily |
| IPR036860 | SH2_dom_sf | Homologous_superfamily |
| IPR050198 | Non-receptor_tyrosine_kinases | Family |
Pfam: PF00017, PF00018, PF07714
Enzyme classification (BRENDA)
- EC 2.7.10.2 — non-specific protein-tyrosine kinase (BRENDA: 41 organisms, 396 substrates, 479 inhibitors, 43 Km, 32 kcat entries)
Substrate kinetics (BRENDA)
6 substrates with measured Km, best-characterized 6. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| ATP | 0.014–17.64 | 12 |
| [KDSRC KINASE]-L-TYROSINE | 0.0057–0.24 | 12 |
| POLY(GLU4-TYR) | 0.018–0.659 | 10 |
| EEEEYIQ[DP]-8-HYDROXY-5-(N,N-DIMETHYLSULFONAMIDO | 0.057 | 1 |
| S1 PEPTIDE | 0.037 | 1 |
| EEEEY | — | 0 |
Catalyzed reactions (Rhea)
- L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+) (RHEA:10596)
UniProt features (35 total): strand 13, domain 3, sequence variant 3, sequence conflict 3, helix 3, splice variant 2, binding site 2, chain 1, turn 1, region of interest 1, compositionally biased region 1, active site 1, modified residue 1
Structure
Experimental structures (PDB)
3 structures by resolution:
| PDB | Title | Method | Resolution (Å) |
|---|---|---|---|
| 3US4 | Crystal structure of a SH2 domain of a megakaryocyte-associated tyrosine kinase (MATK) … | X-RAY DIFFRACTION | 1.5 |
| 1JWO | Crystal Structure Analysis of the SH2 Domain of the Csk Homologous Kinase CHK | X-RAY DIFFRACTION | 2.5 |
| 1X6G | Solution structures of the SH3 domain of human megakaryocyte-associated tyrosine-protein … | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P42679-F1 | 84.24 | 0.63 |
Human Protein Atlas
Protein class: Enzymes, ENZYME proteins, Transferases, Kinases, Tyr protein kinases, Predicted intracellular proteins, Cancer-related genes, Mutational cancer driver genes
Protein evidence: Evidence at protein level
Subcellular location (HPA, imaging): microtubules; centriolar satellite; cytokinetic bridge; cytosol; mitotic spindle
Antibody reliability (HPA): IH approved · IF approved
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1)
| Position | Role |
|---|---|
| 352 | proton acceptor |
Ligand- & substrate-binding residues (2)
| Position | Role |
|---|---|
| 241–249 | ATP |
| 262 | ATP |
Post-translational modifications (1)
| Type | Positions |
|---|---|
| Phosphoserine | 501 |
Function
Pathways and Gene Ontology
Reactome pathways
1 curated (TAS) of 4; 0 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).
4 pathways:
| ID | Pathway | Evidence |
|---|---|---|
| R-HSA-8863795 | Downregulation of ERBB2 signaling | curated |
| R-HSA-162582 | Signal Transduction | — |
| R-HSA-1227986 | Signaling by ERBB2 | — |
| R-HSA-9006934 | Signaling by Receptor Tyrosine Kinases | — |
MSigDB gene sets: 212 (showing top):
RORA1_01, RIZKI_TUMOR_INVASIVENESS_3D_DN, GNF2_ZAP70, MUELLER_PLURINET, RUTELLA_RESPONSE_TO_CSF2RB_AND_IL4_UP, AMIT_EGF_RESPONSE_120_HELA, GNF2_IL2RB, ZHU_CMV_ALL_DN, ALCALA_APOPTOSIS, GNF2_PTPN4, GAVIN_FOXP3_TARGETS_CLUSTER_P3, BLALOCK_ALZHEIMERS_DISEASE_DN, chr19p13, GOMF_PROTEIN_KINASE_ACTIVITY, RUTELLA_RESPONSE_TO_HGF_UP
GO Biological Process (2): protein phosphorylation (GO:0006468), positive regulation of cell population proliferation (GO:0008284)
GO Molecular Function (8): protein tyrosine kinase activity (GO:0004713), non-membrane spanning protein tyrosine kinase activity (GO:0004715), ATP binding (GO:0005524), nucleotide binding (GO:0000166), protein kinase activity (GO:0004672), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740)
GO Cellular Component (4): cytosol (GO:0005829), plasma membrane (GO:0005886), cytoplasm (GO:0005737), membrane (GO:0016020)
Reactome top-level categories
3 top-level categories:
| Category | Pathways |
|---|---|
| Signaling by ERBB2 | 1 |
| Signaling by Receptor Tyrosine Kinases | 1 |
| Signal Transduction | 1 |
GO top-level categories
23 GO namespaces:
| Category | Terms |
|---|---|
| cellular anatomical structure | 3 |
| phosphorylation | 1 |
| protein modification process | 1 |
| cell population proliferation | 1 |
| regulation of cell population proliferation | 1 |
| positive regulation of cellular process | 1 |
| protein kinase activity | 1 |
| protein tyrosine kinase activity | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| anion binding | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| kinase activity | 1 |
| phosphotransferase activity, alcohol group as acceptor | 1 |
| catalytic activity, acting on a protein | 1 |
| binding | 1 |
| transferase activity, transferring phosphorus-containing groups | 1 |
| catalytic activity | 1 |
| cytoplasm | 1 |
| membrane | 1 |
| cell periphery | 1 |
| intracellular anatomical structure | 1 |
Experimentally-supported GO annotations
GO terms backed by direct experimental evidence (ECO experimental codes) — 1 of 14 annotations. The rest are phylogenetic / computational / electronic (IEA).
1 experimentally-supported GO terms:
| GO term | NS | Evidence |
|---|---|---|
| cytosol | CC | direct assay |
Protein interactions and networks
STRING
showing 15 of 1,354 interactions by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| MATK | SLAMF1 | Q13291 | 880 |
| MATK | CD48 | P09326 | 799 |
| MATK | PSMA7 | O14818 | 773 |
| MATK | PTPRC | P08575 | 742 |
| MATK | CD34 | P28906 | 741 |
| MATK | RPS16 | P17008 | 731 |
| MATK | RPL32 | P02433 | 725 |
| MATK | MPP3 | Q13368 | 716 |
| MATK | ABCG1 | P45844 | 707 |
| MATK | ITGAM | P11215 | 675 |
| MATK | CLPP | Q16740 | 661 |
| MATK | IL7R | P16871 | 648 |
| MATK | APOA1 | P02647 | 632 |
| MATK | ITGA2B | P08514 | 622 |
| MATK | KITLG | P21583 | 622 |
IntAct
Human interaction partners of MATK in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).
17 partners by confidence:
| Partner | Interaction type | MIscore | Records |
|---|---|---|---|
| LRRK2 | direct interaction | 0.620 | 2 |
| ERBB2 | direct interaction | 0.590 | 2 |
| BACE2 | physical association | 0.560 | 3 |
| KLK6 | physical association | 0.560 | 3 |
| CSK | association | 0.530 | 2 |
| HSP90AB1 | physical association | 0.520 | 2 |
| FRS3 | physical association | 0.490 | 2 |
| PTK2B | association | 0.460 | 2 |
| AR | direct interaction | 0.440 | 4 |
| LRRK1 | direct interaction | 0.440 | 1 |
| MET | direct interaction | 0.440 | 1 |
| YWHAE | physical association | 0.400 | 2 |
| CDC37 | physical association | 0.400 | 1 |
| NOC3L | physical association | 0.400 | 1 |
| SFN | physical association | 0.400 | 1 |
| CACNA1A | physical association | 0.370 | 1 |
| EWSR1 | physical association | 0.370 | 1 |
BioGRID (47 interactions; top human partners by supporting records): SIRPA (Two-hybrid; 11 records), ERBB2 (Affinity Capture-Western; 3 records), CSK (Affinity Capture-MS; 2 records), KIT (Reconstituted Complex; 2 records), NTRK1 (Affinity Capture-Western; 2 records), AKT1 (Reconstituted Complex), AR (Reconstituted Complex), BRCA1 (Affinity Capture-Western), CACNA1A (Two-hybrid), CD36 (Affinity Capture-Western), CUL3 (Affinity Capture-MS), EGFR (Affinity Capture-Western), ERBB3 (Reconstituted Complex), ERBB4 (Reconstituted Complex), EWSR1 (Two-hybrid)
SIGNOR signaling
1 signaling interactions:
| A | Effect | B | Mechanism |
|---|---|---|---|
| MATK | “down-regulates activity” | LYN | phosphorylation |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 17 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| intracellular signal transduction | 5 | 11.2× | 7e-03 |
Disease & clinical
Genetic variants
Variant evidence for MATK: 75 ClinVar records (0 pathogenic / likely pathogenic); 1 GWAS association.
ClinVar
75 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 61 |
| Likely benign | 6 |
| Benign | 1 |
SpliceAI
Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 19 predictions of 1,036):
| Position(s) | Effect | Δscore | Sites |
|---|---|---|---|
| 19:3778990–3778991 | donor_loss | 1.0000 | 6 |
| 19:3779188 | acceptor_loss | 1.0000 | |
| 19:3779194 | acceptor_gain | 1.0000 | |
| 19:3779377 | donor_loss | 1.0000 | |
| 19:3779696 | donor_loss | 1.0000 | |
| 19:3779805 | acceptor_gain | 1.0000 | |
| 19:3783854 | donor_gain | 1.0000 | |
| 19:3784034–3784035 | acceptor_loss | 1.0000 | 5 |
| 19:3784122 | donor_loss | 1.0000 | |
| 19:3784137 | donor_gain | 1.0000 |
AlphaMissense
1,264 missense substitutions predicted likely pathogenic (of 3,271 scored), across 299 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:
| Residue | Likely-pathogenic substitutions | Mean am_pathogenicity | Max am_pathogenicity |
|---|---|---|---|
| M340 | 9 | 0.947 | 0.995 |
| N357 | 8 | 0.997 | 0.999 |
| D370 | 8 | 0.997 | 0.999 |
| D406 | 8 | 0.996 | 0.998 |
| D352 | 8 | 0.995 | 0.999 |
| H350 | 8 | 0.991 | 0.998 |
| F371 | 8 | 0.982 | 0.995 |
| H168 | 8 | 0.972 | 0.997 |
| F471 | 8 | 0.972 | 0.996 |
| D155 | 8 | 0.958 | 0.989 |
| F273 | 8 | 0.955 | 0.994 |
| F246 | 8 | 0.944 | 0.999 |
| S409 | 8 | 0.943 | 0.998 |
| F186 | 8 | 0.924 | 0.992 |
| H124 | 8 | 0.921 | 0.994 |
| D267 | 8 | 0.913 | 0.971 |
| H285 | 8 | 0.907 | 0.970 |
| F144 | 7 | 0.997 | 0.999 |
| W390 | 7 | 0.997 | 1.000 |
| F123 | 7 | 0.995 | 0.999 |
HPA cancer prognostics
RNA cancer specificity: Low cancer specificity
Human Protein Atlas survival analysis — favorable = higher expression predicts better survival.
2 prognostic cancer types:
| Cancer | Prognostic | p-value |
|---|---|---|
| Breast Invasive Carcinoma (TCGA) | favorable | 0.000381 |
| Ovary Serous Cystadenocarcinoma (TCGA) | unfavorable | 0.000575 |
Disease associations
OMIM: gene MIM:600038 | disease phenotypes:
GWAS associations
1 associations:
| Study | Trait | p-value |
|---|---|---|
| GCST001762_327 | Obesity-related traits | 3e-8 |
EFO canonical traits (from GWAS)
1 canonical traits:
| EFO ID | Trait name |
|---|---|
| EFO:0005109 | energy expenditure |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL4175 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
Phase ≥1, by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 99,779 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
10 molecules by phase:
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL288441 | BOSUTINIB | 4 | 12,869 |
| CHEMBL1287853 | FEDRATINIB | 4 | 3,770 |
| CHEMBL535 | SUNITINIB | 4 | 80,232 |
| CHEMBL603469 | LESTAURTINIB | 3 | |
| CHEMBL1967878 | CENISERTIB | 2 | 373 |
| CHEMBL1980297 | ILORASERTIB | 2 | 613 |
| CHEMBL1721885 | SU-014813 | 2 | 375 |
| CHEMBL574738 | AST-487 | 1 | 468 |
| CHEMBL1908397 | KW-2449 | 1 | 655 |
| CHEMBL1084546 | PF-00562271 | 1 | 424 |
PharmGKB: 1 entry (CPIC guideline: no)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — Csk family
Binding affinities (BindingDB)
21 measured of 81 human assays (82 total across all organisms); most potent 21 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| 1-[2-(4-methylphenyl)-5-tert-butyl-pyrazol-3-yl]-3-[4-(2-morpholin-4-ylethoxy)naphthalen-1-yl]urea | KD | 0.37 nM | |
| CEP-701 | KD | 3.4 nM | |
| 4-[4-[(5-tert-butyl-2-quinolin-6-ylpyrazol-3-yl)carbamoylamino]-3-fluorophenoxy]-N-methylpyridine-2-carboxamide | IC50 | 5.5 nM | |
| 3-methoxy-2-methyl-4-(methylamino)-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-16-one | IC50 | 5.6 nM | US-8822500: Tyrosine kinase inhibitors |
| Staurosporine, 8 | IC50 | 6.5 nM | |
| N-[4-[[(2-hydroxy-1H-indol-3-yl)-phenylmethylidene]amino]phenyl]-N-methyl-2-(4-methylpiperazin-1-yl)acetamide | KI | 15 nM | US-10981896: Indolinone derivatives as inhibitors of maternal embryonic leucine zipper kinase |
| CHEMBL1240703 | KD | 15 nM | |
| 2-(2-Chloro-4-iodo-phenylamino)-N-cyclopropylmethoxy-3,4-difluoro-benzamide | IC50 | 17 nM | |
| PKC-412 | KD | 110 nM | |
| 6-[[5-fluoro-2-(3,4,5-trimethoxyanilino)pyrimidin-4-yl]amino]-2,2-dimethyl-4H-pyrido[3,2-b][1,4]oxazin-3-one | KD | 120 nM | US-9145414: 1,2,4-triazine-6-carboxamide derivative |
| CHEMBL1908397 | KD | 650 nM | |
| 4-[6-methoxy-7-(3-piperidin-1-ylpropoxy)quinazolin-4-yl]-N-(4-propan-2-yloxyphenyl)piperazine-1-carboxamide | KD | 740 nM | |
| (9S)-9-[(dimethylamino)methyl]-6,7,10,11-tetrahydro-9H,18H-5,21:12,17-di(metheno)dibenzo[e,k]pyrrolo[3,4-h][1,4,13]oxadiazacyclohexadecine-18,20(19H)-dione | IC50 | 743 nM | |
| 1-[4-[(4-ethyl-1-piperazinyl)methyl]-3-(trifluoromethyl)phenyl]-3-[4-[[6-(methylamino)-4-pyrimidinyl]oxy]phenyl]urea | KD | 1400 nM | |
| CHEMBL4090364 | IC50 | 1800 nM | |
| 3-(4-morpholin-4-ylpyrido[2,3]furo[2,4-b]pyrimidin-2-yl)phenol | KD | 2400 nM | |
| 5-[(Z)-(5-fluoranyl-2-oxidanylidene-1H-indol-3-ylidene)methyl]-2,4-dimethyl-N-[(2S)-3-morpholin-4-yl-2-oxidanyl-propyl]-1H-pyrrole-3-carboxamide | KD | 2600 nM | |
| 5-({4-[(2,3-dimethyl-2H-indazol-6-yl)(methyl)amino]pyrimidin-2-yl}amino)-2-methylbenzene-1-sulfonamide | KD | 2900 nM | |
| SUNITINIB MALATE | KD | 3500 nM | |
| 5-cyano-N-[2-(cyclohexen-1-yl)-4-[1-[2-(dimethylamino)acetyl]piperidin-4-yl]phenyl]-1H-imidazole-2-carboxamide | KD | 3900 nM | US-20250129067: PLATELET-DERIVED GROWTH FACTOR RECEPTOR (PDGFR) ALPHA INHIBITORS AND USES THEREOF |
| (4-chlorophenyl)-[4-(4-pyridylmethyl)phthalazin-1-yl]amine | KD | 8800 nM |
ChEMBL bioactivities
61 potent at pChembl≥5 of 62 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.40 | Ki | 39.81 | nM | ILORASERTIB |
| 7.30 | Ki | 50.12 | nM | CHEMBL1993661 |
| 7.20 | Ki | 63.1 | nM | CENISERTIB |
| 7.10 | Ki | 79.43 | nM | CHEMBL1978448 |
| 7.10 | Ki | 79.43 | nM | CHEMBL1991395 |
| 7.00 | Ki | 100 | nM | PF-00562271 |
| 6.90 | Ki | 125.9 | nM | CHEMBL1978099 |
| 6.80 | Ki | 158.5 | nM | CHEMBL1998585 |
| 6.80 | Ki | 158.5 | nM | CHEMBL1988838 |
| 6.70 | Ki | 199.5 | nM | CHEMBL1973540 |
| 6.60 | Ki | 251.2 | nM | CHEMBL2004716 |
| 6.58 | Kd | 260 | nM | STAUROSPORINE |
| 6.50 | Ki | 316.2 | nM | CHEMBL1987034 |
| 6.50 | Ki | 316.2 | nM | CHEMBL1989708 |
| 6.50 | Ki | 316.2 | nM | CHEMBL422897 |
| 6.41 | IC50 | 392 | nM | STAUROSPORINE |
| 6.40 | Ki | 398.1 | nM | CHEMBL539474 |
| 6.40 | Ki | 398.1 | nM | CHEMBL1964692 |
| 6.40 | Ki | 398.1 | nM | CHEMBL243088 |
| 6.31 | IC50 | 492 | nM | STAUROSPORINE |
| 6.30 | Ki | 501.2 | nM | CHEMBL244378 |
| 6.30 | Ki | 501.2 | nM | SP-600125 |
| 6.20 | Ki | 631 | nM | CHEMBL1988594 |
| 6.20 | Ki | 631 | nM | CHEMBL271381 |
| 6.20 | Ki | 631 | nM | CHEMBL1983111 |
| 6.10 | Ki | 794.3 | nM | CHEMBL1969372 |
| 6.10 | Ki | 794.3 | nM | CHEMBL1985092 |
| 6.10 | Ki | 794.3 | nM | CHEMBL196363 |
| 6.01 | Kd | 970 | nM | LESTAURTINIB |
| 6.00 | Ki | 1000 | nM | CHEMBL2005886 |
| 6.00 | Ki | 1000 | nM | CHEMBL1980896 |
| 6.00 | Ki | 1000 | nM | CHEMBL2004544 |
| 6.00 | Ki | 1000 | nM | CHEMBL1984162 |
| 6.00 | Ki | 1000 | nM | CHEMBL17370 |
| 5.90 | Ki | 1259 | nM | CHEMBL1970104 |
| 5.89 | IC50 | 1300 | nM | STAUROSPORINE |
| 5.89 | Kd | 1300 | nM | AST-487 |
| 5.80 | Ki | 1585 | nM | CHEMBL246970 |
| 5.80 | Ki | 1585 | nM | CHEMBL1991674 |
| 5.80 | Ki | 1585 | nM | CHEMBL1966143 |
| 5.80 | Ki | 1585 | nM | CHEMBL1991429 |
| 5.80 | Ki | 1585 | nM | CHEMBL508928 |
| 5.80 | Ki | 1585 | nM | CHEMBL1990885 |
| 5.80 | Ki | 1585 | nM | CHEMBL1965507 |
| 5.80 | Ki | 1585 | nM | CHEMBL1979883 |
| 5.80 | Ki | 1585 | nM | CHEMBL404367 |
| 5.77 | Kd | 1700 | nM | FEDRATINIB |
| 5.70 | Ki | 1995 | nM | CHEMBL1983449 |
| 5.70 | Ki | 1995 | nM | CHEMBL1968103 |
| 5.70 | Ki | 1995 | nM | CHEMBL2006715 |
PubChem BioAssay actives
13 with measured affinity, of 682 total; 9 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (2S,3R,4R,6R)-3-methoxy-2-methyl-4-(methylamino)-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-16-one | 624864: Binding constant for CTK kinase domain | kd | 0.2600 | uM |
| (15S,16S,18R)-16-hydroxy-16-(hydroxymethyl)-15-methyl-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8,10,12,20,22,24,26-nonaen-3-one | 507891: Binding affinity to CTK | kd | 0.9700 | uM |
| 1-[4-[(4-ethylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl]-3-[4-[6-(methylamino)pyrimidin-4-yl]oxyphenyl]urea | 624864: Binding constant for CTK kinase domain | kd | 1.3000 | uM |
| Fedratinib | 624864: Binding constant for CTK kinase domain | kd | 1.7000 | uM |
| 5-chloro-2-N-[2-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidin-1-yl]phenyl]-4-N-(2-propan-2-ylsulfonylphenyl)pyrimidine-2,4-diamine | 624864: Binding constant for CTK kinase domain | kd | 2.8000 | uM |
| [4-[(E)-2-(1H-indazol-3-yl)ethenyl]phenyl]-piperazin-1-ylmethanone | 624864: Binding constant for CTK kinase domain | kd | 3.0000 | uM |
| Bosutinib | 624864: Binding constant for CTK kinase domain | kd | 5.8000 | uM |
| 5-[(Z)-(5-fluoro-2-oxo-1H-indol-3-ylidene)methyl]-N-[(2S)-2-hydroxy-3-morpholin-4-ylpropyl]-2,4-dimethyl-1H-pyrrole-3-carboxamide | 624864: Binding constant for CTK kinase domain | kd | 6.2000 | uM |
| Sunitinib | 624864: Binding constant for CTK kinase domain | kd | 7.7000 | uM |
CTD chemical–gene interactions
39 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | decreases expression, increases expression, affects cotreatment | 3 |
| Estradiol | increases expression | 2 |
| Phenylmercuric Acetate | affects cotreatment, decreases expression | 2 |
| Valproic Acid | affects expression, increases methylation | 2 |
| p-Chloromercuribenzoic Acid | affects cotreatment, decreases expression | 2 |
| aristolochic acid I | increases expression | 1 |
| FR900359 | increases phosphorylation | 1 |
| GW 506033X | increases expression, increases response to substance, decreases reaction | 1 |
| triphenyl phosphate | affects expression | 1 |
| lead acetate | decreases expression, affects cotreatment | 1 |
| ethyl-p-hydroxybenzoate | decreases expression | 1 |
| terbufos | increases methylation | 1 |
| chromous chloride | affects cotreatment, decreases expression | 1 |
| chromic oxide | affects cotreatment, decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| entinostat | increases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, decreases expression | 1 |
| abrine | increases expression | 1 |
| dorsomorphin | affects cotreatment, decreases expression | 1 |
| (+)-JQ1 compound | decreases expression | 1 |
| Arsenic Trioxide | decreases expression | 1 |
| Arsenic | affects expression | 1 |
| Benzo(a)pyrene | affects methylation | 1 |
| Cisplatin | affects cotreatment, decreases expression | 1 |
| Fonofos | increases methylation | 1 |
| Lead | affects expression | 1 |
| Lipopolysaccharides | affects reaction, increases expression, increases response to substance, decreases reaction | 1 |
| Parathion | increases methylation | 1 |
| Plant Extracts | decreases expression | 1 |
| Potassium Dichromate | increases expression | 1 |
ChEMBL screening assays
138 unique, capped per target: 137 binding, 1 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1040684 | Binding | Residual activity of MATK at 0.1 uM by microplate scintillation counting | Substituted 2-arylbenzothiazoles as kinase inhibitors: hit-to-lead optimization. — *Bioorg Med Chem* |
| CHEMBL1963689 | Functional | PUBCHEM_BIOASSAY: Navigating the Kinome. (Class of assay: other) Panel member name: MATK | PubChem BioAssay data set |
Cellosaurus cell lines
3 cell lines: 2 cancer cell line, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B3AV | Abcam HEK293T MATK KO | Transformed cell line | Female |
| CVCL_SX34 | HAP1 MATK (-) 1 | Cancer cell line | Male |
| CVCL_SX35 | HAP1 MATK (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
Via MONDO — disease-level, not drug-specific.
Predicted chemistry — Sugi Predict
The predicted patent-compound landscape for MATK across ~30M SureChEMBL compounds — explore on Sugi Predict.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.