MBOAT1
geneOn this page
Also known as MGC44669dJ434O11.1LPEAT1LPLAT14
Summary
MBOAT1 (membrane bound glycerophospholipid O-acyltransferase 1, HGNC:21579) is a protein-coding gene on chromosome 6p22.3, encoding Membrane-bound glycerophospholipid O-acyltransferase 1 (Q6ZNC8). Acyltransferase which catalyzes the transfer of an acyl group from an acyl-CoA towards a lysophospholipid producing a phospholipid and participates in the reacylation step of the phospholipid remodeling pathway also known as the Lands cycle.
This gene belongs to the membrane-bound O-acetyltransferase superfamily. The encoded transmembrane protein is an enzyme that transfers organic compounds, preferably from oleoyl-CoA, to hydroxyl groups of protein targets in membranes. A translocation disrupting this gene may be associated with brachydactyly syndactyly syndrome. Alternately spliced transcript variants have been described for this gene.
Source: NCBI Gene 154141 — RefSeq curated summary.
At a glance
- GWAS associations: 11
- Clinical variants (ClinVar): 91 total
- Druggable target: yes
- MANE Select transcript:
NM_001080480
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:21579 |
| Approved symbol | MBOAT1 |
| Name | membrane bound glycerophospholipid O-acyltransferase 1 |
| Location | 6p22.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | MGC44669, dJ434O11.1, LPEAT1, LPLAT14 |
| Ensembl gene | ENSG00000172197 |
| Ensembl biotype | protein_coding |
| OMIM | 611732 |
| Entrez | 154141 |
Gene structure
Transcript identifiers
Ensembl transcripts: 4 — 4 protein_coding
ENST00000324607, ENST00000883939, ENST00000929690, ENST00000969078
RefSeq mRNA: 1 — MANE Select: NM_001080480
NM_001080480
CCDS: CCDS34346
Canonical transcript exons
ENST00000324607 — 13 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001148481 | 20131144 | 20131199 |
| ENSE00001174497 | 20126517 | 20126700 |
| ENSE00001174503 | 20128699 | 20128753 |
| ENSE00001174515 | 20112876 | 20113008 |
| ENSE00001286025 | 20118437 | 20118540 |
| ENSE00001286042 | 20109598 | 20109749 |
| ENSE00001286057 | 20115288 | 20115352 |
| ENSE00001286076 | 20124408 | 20124600 |
| ENSE00001299453 | 20212136 | 20212469 |
| ENSE00001403889 | 20099684 | 20102412 |
| ENSE00003551116 | 20144220 | 20144315 |
| ENSE00003561813 | 20151185 | 20151262 |
| ENSE00003680341 | 20152624 | 20152769 |
Expression profiles
Bgee: expression breadth ubiquitous, 220 present calls, max score 97.32.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 11.6688 / max 485.8530, expressed in 1536 samples.
FANTOM5 promoters (5 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 72083 | 11.1658 | 1525 |
| 72087 | 0.1710 | 77 |
| 72084 | 0.1662 | 66 |
| 72085 | 0.0958 | 34 |
| 72086 | 0.0700 | 28 |
Top tissues by expression
247 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| oviduct epithelium | UBERON:0004804 | 97.32 | gold quality |
| ileal mucosa | UBERON:0000331 | 94.48 | gold quality |
| right uterine tube | UBERON:0001302 | 93.24 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 91.97 | gold quality |
| fallopian tube | UBERON:0003889 | 90.12 | gold quality |
| tendon of biceps brachii | UBERON:0008188 | 89.77 | gold quality |
| mucosa of sigmoid colon | UBERON:0004993 | 88.83 | gold quality |
| nasal cavity epithelium | UBERON:0005384 | 88.75 | gold quality |
| bronchial epithelial cell | CL:0002328 | 88.74 | gold quality |
| epithelium of nasopharynx | UBERON:0001951 | 88.53 | gold quality |
| colonic mucosa | UBERON:0000317 | 88.49 | gold quality |
| bronchus | UBERON:0002185 | 88.07 | gold quality |
| rectum | UBERON:0001052 | 87.67 | gold quality |
| tibia | UBERON:0000979 | 87.20 | gold quality |
| monocyte | CL:0000576 | 87.18 | gold quality |
| leukocyte | CL:0000738 | 86.84 | gold quality |
| transverse colon | UBERON:0001157 | 86.55 | gold quality |
| epithelial cell of pancreas | CL:0000083 | 85.50 | silver quality |
| duodenum | UBERON:0002114 | 85.47 | gold quality |
| tibial nerve | UBERON:0001323 | 84.65 | gold quality |
| palpebral conjunctiva | UBERON:0001812 | 84.60 | gold quality |
| blood | UBERON:0000178 | 84.48 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 84.28 | gold quality |
| large intestine | UBERON:0000059 | 84.22 | gold quality |
| colon | UBERON:0001155 | 84.17 | gold quality |
| intestine | UBERON:0000160 | 83.95 | gold quality |
| tendon | UBERON:0000043 | 83.89 | gold quality |
| granulocyte | CL:0000094 | 83.79 | gold quality |
| calcaneal tendon | UBERON:0003701 | 83.42 | gold quality |
| small intestine | UBERON:0002108 | 83.30 | gold quality |
Single-cell (SCXA)
Detected in 6 experiment(s), a significant marker in 4.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-5061 | yes | 7580.36 |
| E-MTAB-6911 | yes | 1042.89 |
| E-MTAB-7052 | yes | 744.37 |
| E-GEOD-81608 | yes | 170.85 |
| E-ANND-3 | no | 4.08 |
| E-CURD-112 | no | 2.27 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
103 targeting MBOAT1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4795-3P | 100.00 | 74.62 | 4024 |
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-4510 | 100.00 | 66.60 | 2050 |
| HSA-MIR-6127 | 100.00 | 66.76 | 2188 |
| HSA-MIR-6129 | 100.00 | 66.46 | 2080 |
| HSA-MIR-6130 | 100.00 | 66.69 | 2012 |
| HSA-MIR-6133 | 100.00 | 66.48 | 2064 |
| HSA-MIR-126-5P | 100.00 | 72.71 | 3180 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-MIR-371B-5P | 99.99 | 75.34 | 4759 |
| HSA-MIR-373-5P | 99.98 | 75.36 | 4753 |
| HSA-MIR-616-5P | 99.98 | 75.58 | 4775 |
| HSA-LET-7F-2-3P | 99.98 | 70.98 | 2588 |
| HSA-MIR-1185-1-3P | 99.98 | 71.04 | 2593 |
| HSA-MIR-1185-2-3P | 99.98 | 71.04 | 2593 |
| HSA-MIR-3692-3P | 99.98 | 70.27 | 2139 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-103A-3P | 99.98 | 69.14 | 1595 |
| HSA-MIR-107 | 99.98 | 69.14 | 1595 |
| HSA-MIR-23A-3P | 99.95 | 74.24 | 3163 |
| HSA-MIR-23B-3P | 99.95 | 74.24 | 3163 |
| HSA-MIR-23C | 99.95 | 73.92 | 3192 |
| HSA-MIR-3119 | 99.92 | 71.34 | 2390 |
| HSA-MIR-1305 | 99.91 | 71.43 | 3443 |
Literature-anchored findings (GeneRIF, showing 1)
- MBOAT1 homozygous missense variant causes nonobstructive azoospermia. (PMID:34596601)
Cross-species orthologs
6 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | mboat1 | ENSDARG00000029356 |
| mus_musculus | Mboat1 | ENSMUSG00000038732 |
| rattus_norvegicus | Mboat1 | ENSRNOG00000027125 |
| drosophila_melanogaster | oys | FBGN0033476 |
| caenorhabditis_elegans | WBGENE00007446 | |
| caenorhabditis_elegans | WBGENE00016934 |
Paralogs (5): PORCN (ENSG00000102312), LPCAT3 (ENSG00000111684), MBOAT7 (ENSG00000125505), MBOAT2 (ENSG00000143797), MBOAT4 (ENSG00000177669)
Protein
Protein identifiers
Membrane-bound glycerophospholipid O-acyltransferase 1 — Q6ZNC8 (reviewed: Q6ZNC8)
Alternative names: 1-acylglycerophosphocholine O-acyltransferase, 1-acylglycerophosphoethanolamine O-acyltransferase, 1-acylglycerophosphoserine O-acyltransferase, Lysophosphatidylserine acyltransferase, Lysophospholipid acyltransferase 1, Membrane-bound O-acyltransferase domain-containing protein 1
All UniProt accessions (1): Q6ZNC8
UniProt curated annotations — full annotation on UniProt →
Function. Acyltransferase which catalyzes the transfer of an acyl group from an acyl-CoA towards a lysophospholipid producing a phospholipid and participates in the reacylation step of the phospholipid remodeling pathway also known as the Lands cycle. Acts on lysophosphatidylserine (1-acyl-2-hydroxy-sn-glycero-3-phospho-L-serine or LPS) and lysophosphatidylethanolamine (1-acyl-sn-glycero-3-phosphoethanolamine or LPE), and to a lesser extend lysophosphatidylcholine. Prefers oleoyl-CoA as the acyl donor and 1-oleoyl-LPE as acceptor. May play a role in neurite outgrowth during neuronal differentiation.
Subcellular location. Endoplasmic reticulum membrane.
Tissue specificity. Expressed in neutrophils.
Activity regulation. Partially inhibited by thimerosal.
Pathway. Lipid metabolism; phospholipid metabolism.
Similarity. Belongs to the membrane-bound acyltransferase family.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q6ZNC8-1 | 1 | yes |
| Q6ZNC8-2 | 2 | |
| Q6ZNC8-3 | 3 |
RefSeq proteins (1): NP_001073949* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR004299 | MBOAT_fam | Family |
| IPR049941 | LPLAT_7/PORCN-like | Family |
Pfam: PF03062
Catalyzed reactions (Rhea), 12 shown:
- a 1-acyl-sn-glycero-3-phosphocholine + an acyl-CoA = a 1,2-diacyl-sn-glycero-3-phosphocholine + CoA (RHEA:12937)
- a 1-acyl-sn-glycero-3-phosphoethanolamine + an acyl-CoA = a 1,2-diacyl-sn-glycero-3-phosphoethanolamine + CoA (RHEA:32995)
- a 1-acyl-sn-glycero-3-phospho-L-serine + an acyl-CoA = a 1,2-diacyl-sn-glycero-3-phospho-L-serine + CoA (RHEA:33191)
- 1-hexadecanoyl-sn-glycero-3-phosphocholine + (9Z)-octadecenoyl-CoA = 1-hexadecanoyl-2-(9Z-octadecenoyl)-sn-glycero-3-phosphocholine + CoA (RHEA:35991)
- 1-hexadecanoyl-sn-glycero-3-phosphoethanolamine + (9Z)-octadecenoyl-CoA = 1-hexadecanoyl-2-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine + CoA (RHEA:36015)
- 1-(9Z-octadecenoyl)-sn-glycero-3-phospho-L-serine + (9Z,12Z)-octadecadienoyl-CoA = 1-(9Z-octadecenoyl)-2-(9Z,12Z-octadienoyl)-sn-glycero-3-phospho-L-serine + CoA (RHEA:37375)
- 1-(9Z-octadecenoyl)-sn-glycero-3-phospho-L-serine + (9Z)-hexadecenoyl-CoA = 1-(9Z-octadecenoyl)-2-(9Z-hexadecenoyl)-sn-glycero-3-phospho-L-serine + CoA (RHEA:37399)
- 1-(9Z-octadecenoyl)-sn-glycero-3-phospho-L-serine + octadecanoyl-CoA = 1-(9Z-octadecenoyl)-2-octadecanoyl-sn-glycero-3-phospho-L-serine + CoA (RHEA:37403)
- 1-(9Z-octadecenoyl)-sn-glycero-3-phospho-L-serine + (9Z)-octadecenoyl-CoA = 1,2-di-(9Z)-octadecenoyl-sn-glycero-3-phospho-L-serine + CoA (RHEA:37407)
- 1-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine + (9Z)-octadecenoyl-CoA = 1,2-di-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine + CoA (RHEA:37499)
- 1-octadecanoyl-sn-glycero-3-phosphoethanolamine + (9Z)-octadecenoyl-CoA = 1-octadecanoyl-2-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine + CoA (RHEA:37523)
- a 1-O-(1Z-alkenyl)-sn-glycero-3-phosphoethanolamine + (9Z)-octadecenoyl-CoA = 1-O-(1Z)-alkenyl-2-(9Z)-octadecenoyl-sn-glycero-3-phosphoethanolamine + CoA (RHEA:37631)
UniProt features (20 total): transmembrane region 9, splice variant 3, sequence conflict 3, active site 2, chain 1, modified residue 1, sequence variant 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q6ZNC8-F1 | 89.63 | 0.82 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (2): 350; 381
Post-translational modifications (1): 488
Function
Pathways and Gene Ontology
Reactome pathways
6 pathways
| ID | Pathway |
|---|---|
| R-HSA-1482801 | Acyl chain remodelling of PS |
| R-HSA-1482839 | Acyl chain remodelling of PE |
| R-HSA-1430728 | Metabolism |
| R-HSA-1483206 | Glycerophospholipid biosynthesis |
| R-HSA-1483257 | Phospholipid metabolism |
| R-HSA-556833 | Metabolism of lipids |
MSigDB gene sets: 197 (showing top):
GSE45365_NK_CELL_VS_BCELL_UP, GOBP_PHOSPHATIDYLSERINE_ACYL_CHAIN_REMODELING, GOBP_LIPID_MODIFICATION, GOBP_PHOSPHOLIPID_METABOLIC_PROCESS, GOBP_PHOSPHATIDYLCHOLINE_METABOLIC_PROCESS, GOZGIT_ESR1_TARGETS_DN, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, GOBP_NEUROGENESIS, GOBP_ORGANOPHOSPHATE_METABOLIC_PROCESS, GOBP_ORGANOPHOSPHATE_BIOSYNTHETIC_PROCESS, GOBP_PHOSPHOLIPID_BIOSYNTHETIC_PROCESS, GOBP_GLYCEROLIPID_METABOLIC_PROCESS, GOBP_REGULATION_OF_CELL_PROJECTION_ORGANIZATION, BILD_E2F3_ONCOGENIC_SIGNATURE, SCHAEFFER_PROSTATE_DEVELOPMENT_48HR_UP
GO Biological Process (7): phospholipid biosynthetic process (GO:0008654), regulation of neuron projection development (GO:0010975), lipid modification (GO:0030258), phosphatidylserine acyl-chain remodeling (GO:0036150), phosphatidylethanolamine acyl-chain remodeling (GO:0036152), lipid metabolic process (GO:0006629), phospholipid metabolic process (GO:0006644)
GO Molecular Function (7): 1-acylglycerol-3-phosphate O-acyltransferase activity (GO:0003841), acyltransferase activity (GO:0016746), 2-acylglycerol-3-phosphate O-acyltransferase activity (GO:0047144), 1-acylglycerophosphocholine O-acyltransferase activity (GO:0047184), 1-acylglycerophosphoethanolamine O-acyltransferase activity (GO:0106262), 1-acylglycerophosphoserine O-acyltransferase activity (GO:0106263), transferase activity (GO:0016740)
GO Cellular Component (3): endoplasmic reticulum membrane (GO:0005789), membrane (GO:0016020), endoplasmic reticulum (GO:0005783)
Reactome top-level categories
Rollup of top-4 pathways:
| Category | Pathways |
|---|---|
| Glycerophospholipid biosynthesis | 2 |
| Phospholipid metabolism | 1 |
| Metabolism of lipids | 1 |
| Metabolism | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| acyltransferase activity, transferring groups other than amino-acyl groups | 3 |
| lipid metabolic process | 2 |
| lysophosphatidic acid acyltransferase activity | 2 |
| phospholipid metabolic process | 1 |
| lipid biosynthetic process | 1 |
| organophosphate biosynthetic process | 1 |
| neuron projection development | 1 |
| regulation of plasma membrane bounded cell projection organization | 1 |
| phosphatidylserine metabolic process | 1 |
| phosphatidylcholine metabolic process | 1 |
| primary metabolic process | 1 |
| organophosphate metabolic process | 1 |
| acylglycerol O-acyltransferase activity | 1 |
| transferase activity | 1 |
| catalytic activity | 1 |
| organelle membrane | 1 |
| nuclear outer membrane-endoplasmic reticulum membrane network | 1 |
| endoplasmic reticulum subcompartment | 1 |
| cellular anatomical structure | 1 |
| cytoplasm | 1 |
| endomembrane system | 1 |
| intracellular membrane-bounded organelle | 1 |
Protein interactions and networks
STRING
2108 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| MBOAT1 | GRIFIN | A4D1Z8 | 521 |
| MBOAT1 | CDKAL1 | Q5VV42 | 518 |
| MBOAT1 | LPCAT4 | Q643R3 | 506 |
| MBOAT1 | ZBTB8B | Q8NAP8 | 475 |
| MBOAT1 | LPGAT1 | Q92604 | 469 |
| MBOAT1 | AGPAT4 | Q9NRZ5 | 463 |
| MBOAT1 | PNLIPRP1 | P54315 | 460 |
| MBOAT1 | CHPT1 | Q8WUD6 | 434 |
| MBOAT1 | CEPT1 | Q9Y6K0 | 410 |
| MBOAT1 | PIP5KL1 | Q5T9C9 | 405 |
| MBOAT1 | AGPAT1 | Q99943 | 396 |
| MBOAT1 | FAM8A1 | Q9UBU6 | 388 |
| MBOAT1 | LCLAT1 | Q6UWP7 | 387 |
| MBOAT1 | GRHL1 | Q9NZI5 | 383 |
| MBOAT1 | KLF11 | O14901 | 366 |
IntAct
3 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| MBOAT1 | DERL1 | psi-mi:“MI:0914”(association) | 0.350 |
| SLC30A7 | ESYT2 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (34): ATP1A1 (Affinity Capture-MS), ATP2A2 (Affinity Capture-MS), ATP5A1 (Affinity Capture-MS), ATP5B (Affinity Capture-MS), CAV1 (Affinity Capture-MS), EMD (Affinity Capture-MS), NR3C1 (Affinity Capture-MS), HSPA4 (Affinity Capture-MS), TNPO1 (Affinity Capture-MS), SLC1A5 (Affinity Capture-MS), SLC3A2 (Affinity Capture-MS), TAP1 (Affinity Capture-MS), SLC39A7 (Affinity Capture-MS), SLC7A5 (Affinity Capture-MS), TECR (Affinity Capture-MS)
ESM2 similar proteins: A0A0P0WY03, A0A161IUT7, A7T1N0, A8WXS4, A8WZ09, G5ECD6, G5ED45, I1MSF2, K7LC65, O04940, O42579, O49639, O59802, O94673, P25628, P53629, P84285, Q08929, Q09758, Q0JJZ6, Q10269, Q19468, Q1PE48, Q22329, Q28GF5, Q3T1J2, Q4V7N7, Q55BH9, Q5GKZ7, Q5I396, Q5ZKL6, Q61086, Q6CK18, Q6ZNC8, Q6ZWT7, Q7Q5R9, Q7TSN4, Q7Z139, Q7Z7B1, Q876L3
Diamond homologs: O42916, Q08548, Q6ZNC8, Q3T1J2, Q5ZKL6, Q6NN55, Q6ZWT7, Q8BH98, Q8R3I2, Q91V01
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
91 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 66 |
| Likely benign | 6 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
2714 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 6:20109591:AACTT:A | donor_loss | 1.0000 |
| 6:20109592:ACTT:A | donor_loss | 1.0000 |
| 6:20109593:CTT:C | donor_loss | 1.0000 |
| 6:20109594:TTACT:T | donor_loss | 1.0000 |
| 6:20109595:TA:T | donor_loss | 1.0000 |
| 6:20109596:A:AC | donor_gain | 1.0000 |
| 6:20109596:ACTTG:A | donor_loss | 1.0000 |
| 6:20109597:C:CT | donor_gain | 1.0000 |
| 6:20109597:C:T | donor_loss | 1.0000 |
| 6:20109597:CT:C | donor_gain | 1.0000 |
| 6:20109597:CTT:C | donor_gain | 1.0000 |
| 6:20109750:C:CG | acceptor_loss | 1.0000 |
| 6:20112870:ACTT:A | donor_loss | 1.0000 |
| 6:20112871:CTTA:C | donor_loss | 1.0000 |
| 6:20112872:TTACC:T | donor_loss | 1.0000 |
| 6:20112873:TA:T | donor_loss | 1.0000 |
| 6:20112874:A:AC | donor_gain | 1.0000 |
| 6:20112874:ACCGC:A | donor_loss | 1.0000 |
| 6:20112875:C:CC | donor_gain | 1.0000 |
| 6:20112875:C:CT | donor_loss | 1.0000 |
| 6:20112875:CCG:C | donor_gain | 1.0000 |
| 6:20112875:CCGCT:C | donor_gain | 1.0000 |
| 6:20113004:ACACA:A | acceptor_gain | 1.0000 |
| 6:20113005:CACA:C | acceptor_gain | 1.0000 |
| 6:20113005:CACAC:C | acceptor_gain | 1.0000 |
| 6:20113007:CA:C | acceptor_gain | 1.0000 |
| 6:20113007:CACTG:C | acceptor_loss | 1.0000 |
| 6:20113009:C:CA | acceptor_loss | 1.0000 |
| 6:20113009:C:CC | acceptor_gain | 1.0000 |
| 6:20115287:CCA:C | donor_gain | 1.0000 |
AlphaMissense
3239 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 6:20109636:A:C | F441L | 0.998 |
| 6:20109636:A:T | F441L | 0.998 |
| 6:20109638:A:G | F441L | 0.998 |
| 6:20112944:G:C | H381D | 0.998 |
| 6:20112947:A:G | W380R | 0.998 |
| 6:20112947:A:T | W380R | 0.998 |
| 6:20126670:A:C | S187R | 0.998 |
| 6:20126670:A:T | S187R | 0.998 |
| 6:20126672:T:G | S187R | 0.998 |
| 6:20131190:C:A | M143I | 0.998 |
| 6:20131190:C:G | M143I | 0.998 |
| 6:20131190:C:T | M143I | 0.998 |
| 6:20112940:C:A | G382V | 0.997 |
| 6:20115298:A:G | W356R | 0.997 |
| 6:20115298:A:T | W356R | 0.997 |
| 6:20115314:A:C | N350K | 0.997 |
| 6:20115314:A:T | N350K | 0.997 |
| 6:20124417:A:G | W300R | 0.997 |
| 6:20124417:A:T | W300R | 0.997 |
| 6:20131191:A:G | M143T | 0.997 |
| 6:20144265:C:G | R125P | 0.997 |
| 6:20112912:G:C | F391L | 0.996 |
| 6:20112912:G:T | F391L | 0.996 |
| 6:20112914:A:G | F391L | 0.996 |
| 6:20112928:C:T | G386E | 0.996 |
| 6:20112941:C:G | G382R | 0.996 |
| 6:20112945:C:A | W380C | 0.996 |
| 6:20112945:C:G | W380C | 0.996 |
| 6:20112952:G:T | A378D | 0.996 |
| 6:20115319:A:G | W349R | 0.996 |
dbSNP variants (sampled 300 via entrez): RS1000025750 (6:20153750 C>T), RS1000142428 (6:20149739 AT>A), RS1000182052 (6:20191029 C>A), RS1000184315 (6:20108199 G>A), RS1000204148 (6:20187794 C>A), RS1000211519 (6:20101745 C>T), RS1000236755 (6:20119821 A>G), RS1000242778 (6:20102087 C>T), RS1000314080 (6:20197630 C>G), RS1000336615 (6:20138717 T>C), RS1000341344 (6:20138151 G>A), RS1000346885 (6:20197966 C>G), RS1000363556 (6:20113714 C>G), RS1000396037 (6:20144885 A>T), RS1000476008 (6:20121568 C>T)
Disease associations
OMIM: gene MIM:611732 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
11 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000635_19 | Response to statin therapy | 7.000000e-07 |
| GCST001762_525 | Obesity-related traits | 2.000000e-06 |
| GCST002324_3 | Anger | 4.000000e-06 |
| GCST002599_5 | Longevity (90 years and older) | 8.000000e-06 |
| GCST003773_6 | Loneliness (multivariate analysis) | 2.000000e-06 |
| GCST004029_16 | Angiotensin-converting enzyme inhibitor intolerance | 4.000000e-08 |
| GCST006466_2 | Endometrial cancer (Non-endometrioid histology) | 5.000000e-07 |
| GCST009391_882 | Metabolite levels | 3.000000e-06 |
| GCST010043_136 | Asthma | 4.000000e-08 |
| GCST010242_72 | HDL cholesterol levels | 5.000000e-09 |
| GCST010796_887 | Electrocardiogram morphology (amplitude at temporal datapoints) | 4.000000e-08 |
EFO canonical traits (6, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0003015 | aggressive behavior |
| EFO:0007865 | loneliness measurement |
| EFO:0005325 | response to angiotensin-converting enzyme inhibitor |
| EFO:0010439 | triacylglycerol 58:12 measurement |
| EFO:0004612 | high density lipoprotein cholesterol measurement |
| EFO:0004327 | electrocardiography |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL6067162 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
1 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs10946364 | MBOAT1 | 0.00 | 0 |
ChEMBL bioactivities
2 potent at pChembl≥5 of 2 total, top 2 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 6.09 | Kd | 816.6 | nM | CHEMBL3752910 |
| 6.05 | ED50 | 900.1 | nM | CHEMBL3752910 |
PubChem BioAssay actives
1 with measured affinity, of 2 total; 1 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149884: Binding affinity to human MBOAT1 incubated for 45 mins by Kinobead based pull down assay | kd | 0.8166 | uM |
CTD chemical–gene interactions
44 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects cotreatment, increases expression, affects expression | 6 |
| trichostatin A | affects expression, increases expression | 3 |
| sodium arsenite | decreases expression, affects cotreatment, increases abundance, increases expression | 3 |
| potassium chromate(VI) | affects cotreatment, decreases expression, increases expression | 2 |
| mercuric bromide | increases expression, affects cotreatment | 2 |
| chromium hexavalent ion | affects expression, decreases expression, increases abundance | 2 |
| entinostat | increases expression, affects cotreatment | 2 |
| (+)-JQ1 compound | decreases expression | 2 |
| Panobinostat | affects cotreatment, increases expression | 2 |
| Benzo(a)pyrene | decreases expression, increases expression | 2 |
| Estradiol | increases expression, affects binding, decreases reaction | 2 |
| Phenylmercuric Acetate | affects cotreatment, increases expression | 2 |
| Tretinoin | increases expression | 2 |
| Cyclosporine | increases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| urushiol | decreases expression | 1 |
| methylmercuric chloride | increases expression | 1 |
| zinc chromate | decreases expression, increases abundance | 1 |
| manganese chloride | affects cotreatment, decreases expression, increases abundance | 1 |
| nickel sulfate | increases expression | 1 |
| S-(1,2-dichlorovinyl)cysteine | increases expression, affects cotreatment, decreases expression, affects response to substance | 1 |
| epigallocatechin gallate | affects cotreatment, decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| perfluorooctane sulfonic acid | decreases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| ICG 001 | increases expression | 1 |
| abrine | decreases expression | 1 |
| dorsomorphin | affects cotreatment, increases expression | 1 |
| Resveratrol | affects cotreatment, increases expression | 1 |
ChEMBL screening assays
1 unique, capped per target: 1 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5652926 | Binding | Binding affinity to human MBOAT1 incubated for 45 mins by Kinobead based pull down assay | NVP-BHG712: Effects of Regioisomers on the Affinity and Selectivity toward the EPHrin Family. — ChemMedChem |
Cellosaurus cell lines
2 cell lines: 2 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_E2BX | HAP1 MBOAT1 (-) 1 | Cancer cell line | Male |
| CVCL_E2BY | HAP1 MBOAT1 (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): endometrial carcinoma